|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1228 | VNG1279 | HQ1515A | hla2368 | HVO_1092 | Hbo0597 | rrnAC1175 | Hmu1463 | Hut0457 | NP3736A |
753 | VNG1279 | 1285 | 598 | 646 | 590 | 626 | 567 | 618 | 611 | 605 |
781 | HQ1515A | 598 | 1367 | 665 | 711 | 779 | 695 | 670 | 619 | 630 |
859 | hla2368 | 646 | 665 | 1230 | 726 | 734 | 731 | 754 | 661 | 701 |
859 | HVO_1092 | 590 | 711 | 726 | 1217 | 870 | 756 | 737 | 678 | 661 |
943 | Hbo0597 | 626 | 779 | 734 | 870 | 1225 | 727 | 760 | 747 | 738 |
870 | rrnAC1175 | 567 | 695 | 731 | 756 | 727 | 1260 | 778 | 723 | 764 |
947 | Hmu1463 | 618 | 670 | 754 | 737 | 760 | 778 | 1214 | 748 | 774 |
867 | Hut0457 | 611 | 619 | 661 | 678 | 747 | 723 | 748 | 1223 | 759 |
884 | NP3736A | 605 | 630 | 701 | 661 | 738 | 764 | 774 | 759 | 1227 |
183 symbols consensus MKHLPKHLRPRWRYLAVEIESWPDADFDRRDFQRELWYAAQNLLGDAGSADADLTVLRFS #oth 1......211.1..11.22.2..31323.341..21.1..1..3..41..3313312615 VNG1279 :::::::V:::::::::G::A::::GIE:S::::A::F::G:::::P:::::GVR:VAY: HQ1515A :::::::::::::::::A:::::H:SI::ET::::::::::::Y::TQ::HT::A:FN:E hla2368 V:::::::::::::F::G::T:::::LG::G:::A:::::G::::::::::::::L:S:: HVO_1092 :::::::::::R::::::V:T::GV:LA:GP::::::::::::Y:::::::::::::G:D Hbo0597 ::::::::Q:::::::::L::::::Q:::G:::::::::::::Y::S:::A::::::S:: rrnAC1175 :::::::::::::::::G::T::N:S:G::A::::V::::::::::T:::ET:M:::Q:H Hmu1463 ::::::::Q::::::G:::::::::::G::TL:::::::::::V:::::::L:::::::A Hut0457 :::::::F:Q::::::::L:T::::::::G::::H::F::::::::V:::AV::S:V::E NP3736A :::::::::::::::::GL:::::::I:::A::::::F:::::I::::::AL:GS::H:R consensus FADGRGEAIVRARRGEVDRARAALACLSTVDDDPVGVRVRGISGTVRACEERYLRGRAEP #oth 4511512121.111142361.1221222313342112212.2...1..12.1.3424626 VNG1279 :R::::::L::::::T:S:::::V::V:A:REH::R:C:::V:::M::AR::::D:LDT: HQ1515A :S:::::T:I:T:::TESH::T:V::IDEI::YA::I:IL:::::::::::::FNAWTGN hla2368 HDG:E::::::::H:H::D:::TI::V:E:::E::::::::::::::::::::MGRAGGS HVO_1092 Y:::VA:T:::::::H:ED:::::::IDA:GG:::::::::V:::::::S::::H:::GI Hbo0597 ::::D::T::::Y:::E:::::::T:I:::NGS::::::A::::::::::::::GR::GT rrnAC1175 DY::TA:::::T:::QTNP:::::T::DS::::D:R:::::::::::::::K:I::PP:F Hmu1463 :E::L:S:L::T::DRT:S:::VI:S:::I:::::::::::T:::::::::K:I:RAS:: Hut0457 Q:GPT:T::I:T:::::SQ:::V::T:ES::A::::L::::V:::::::::K::G::P:S NP3736A :E::D:::VI::::::::AL::V::T:::::GH:L::V:::V:::::::::K:I::PQ:G consensus SEERDVAFEGADRPAVVRDDRVDVAT-D------------------DG-FVGATALDFE- #oth 43324.1.2233.3112.554311542311111111111111111132133..232.442 VNG1279 ERRS::::D:DA:DG:C:GEN:::VAG::::::::::::::::::::::W:::RRR:CGT HQ1515A KK:SN::::NES::::I:EVC::I:::GNINATGNTDTGADSSRNINT::T:::R::::: hla2368 :TQ::::::::E:S::::E:AY::W::G::::::::::::::::::SA:Y:::A:F:T:: HVO_1092 ::::T:V::NDS:T:::::SLF::RG:S::::::::::::::::::::::T:::Q::::: Hbo0597 PK::::V::DES:::::::S:I::RG:A::::::::::::::::::::::::::Q::::: rrnAC1175 T:Q:H:V::N:::S:T::PP:Y::E:AS::::::::::::::::::::A:::::::::R: Hmu1463 ::Q:Q:::D:DE:T:::::G::::::::::::::::::::::::::::::S:::D::LQ: Hut0457 T:HD::::A:T:::::I:AG::::HV::::::::::::::::::::::::I:::QR:LS: NP3736A T:::T:::A:::::::::N:::T:EL:S::::::::::::::::::G::P:::::::IRD consensus --- #oth 211 VNG1279 DGE HQ1515A ::: hla2368 ::: HVO_1092 ::: Hbo0597 ::: rrnAC1175 ::: Hmu1463 ::: Hut0457 ::: NP3736A N::