9 genomes BUD0682 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG1783 rrnAC1724 HVO_2323 Hbo2008 Hmu2329 Hut0888 hla1128 NP4536A HQ3327A

Pairwise sequence scores
Consensus score	587	hla1128	HVO_2323	Hbo2008	HQ3327A	VNG1783	NP4536A	Hmu2329	Hut0888	rrnAC1724
365	hla1128	705	319	333	298	249	257	250	271	239
418	HVO_2323	319	572	374	391	267	351	292	314	288
395	Hbo2008	333	374	623	428	237	288	294	298	244
405	HQ3327A	298	391	428	701	268	304	272	311	271
366	VNG1783	249	267	237	268	594	293	312	270	339
392	NP4536A	257	351	288	304	293	692	327	324	338
409	Hmu2329	250	292	294	272	312	327	697	336	355
381	Hut0888	271	314	298	311	270	324	336	576	336
353	rrnAC1724	239	288	244	271	339	338	355	336	553

97 symbols
consensus       ------------MTRTR-RDLGWVGVFAVLVALAVPWFLWGDSTVAAGLPVWLWWHIGWM
#oth            1111112221122535514324.4442221421.1..1..2433242...1.2...11.1
hla1128         :::::::::::::S:S:::::V:IPT::::::F::::P:::VDR:V::::::I:::VA:L
HVO_2323        ::::::::::::---V::I:YR::A:::I::TF::::::::::R:F::::L:::::::::
Hbo2008         :::::::::::::::P::T:YV:::::::::TF:I:::::R:AATW::::::::::::::
HQ3327A         :::::::::::::::YQ:::YI:I:::::::TF:I::::::NTVTFG:::::::::::::
VNG1783         ::::::::::::-M::W::A:::G:C:V::LG::::::::RSD:LV:::::::::::A::
NP4536A         MFRAGDAIVGST:VS:A:ERY::AVL::::L:::I::::::::RT:L:::L:::::V::L
Hmu2329         ::::::MWDGSNW::S:FEA:::ALAALAVA:::::::::R:::::::::L:V:::V:::
Hut0888         :::::::::::::AERN:GT:F::V:GL::SG::I:::::::D::L::::::::::::::
rrnAC1724       ::::::::::::-MS:V::AA::TV:AL::M:::::::::DT::::::::::::::V:::

consensus       GLASVAFYAFTR-RAWGRGV------EGEGR------
#oth            433222.43.22142.231243222244366233322
hla1128         ::CT:L:WR:V:SG::E::MGLRPES:PGSTVGGDRR
HVO_2323        ::TA:V:HL::::T::D::I::::::V::::::::::
Hbo2008         V:::G:::L::L:G::D::MNV:::::P:EM::::::
HQ3327A         CI:A:::A:::::N::D::MDVPITGADD:MEDRADG
VNG1783         :VTAL::G::A:::D::LF:::::::T::RQ::::::
NP4536A         AAS::V:WV::K:::::I:IVEP:::A::K:::::::
Hmu2329         :::::::::::::YG::V:::::::::A:TPEVNRDG
Hut0888         M::::V::V::::::::V::::::::-ER:V::::::
rrnAC1724       A::::V:AV:A::TD::L::::::::-E:VN::::::