Home |  Text search
[C] (SdhC) COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
9 genomes BUD0686 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1310

rrnAC1091

HVO_2811

Hbo2549

Hmu1789

Hut0491

hla1265

NP4270A

HQ2997A

Pairwise sequence scores
Consensus score963 NP4270A VNG1310 Hut0491 rrnAC1091 Hmu1789 hla1265 HQ2997A HVO_2811 Hbo2549
857NP4270A 969 804 771 797 808 781 795 804 803
864VNG1310 804 1043 792 814 814 761 809 816 792
808Hut0491 771 792 960 799 825 723 779 772 755
859rrnAC1091 797 814 799 1030 868 788 807 812 806
877Hmu1789 808 814 825 868 979 781 808 830 821
823hla1265 781 761 723 788 781 1054 796 812 806
869HQ2997A 795 809 779 807 808 796 974 844 845
884HVO_2811 804 816 772 812 830 812 844 961 865
876Hbo2549 803 792 755 806 821 806 845 865 964

153 symbols
consensus       ----------MSQSYNRGLVEDFGRWREFSAGMWAWIFHKFTGWVLVGYLFTHIAVLSTA
#oth            1111111111.111.1..211..1..31.2......21........1......11....1
NP4270A         :::::::::::::::D::::::::::Q:::::::::::::::::::I::::::V::::::
VNG1310         MCGQSRPLVG::E::D::::A:::::T:::::::::V:::::::::::::::::S::::S
Hut0491         :::::::::::A:T:D::A:::::::::::::::::LL::::::::::::::::::::::
rrnAC1091       ::::::::::::::::::T::::::::::T:::::::::::::::::::::::::::::S
Hmu1789         ::::::::::::::::::T::::::::D::::::::::::::::::::::::::::::::
hla1265         :::::::::::::::::::I:::S:::::Q::::::::::::::::I:::::::::::::
HQ2997A         ::::::::::::::::::::::::::::::::::::V:::::::::::::::::::::::
HVO_2811        :::::::::::::::::::I:::S::::::::::::::::::::::::::::::::::::
Hbo2549         :::::::::::::::::::I::::::K:::::::::::::::::::::::::::::::::

consensus       L------------QGAALYTNTLQGLESLLIVRILEVGLLAVAVFHILNGIRLLFVDLGV
#oth            322222222111153544115.123..2.12..2........1...1...2...21...2
NP4270A         T::::::::::::VD::T::Q:::::::::V::F::::::::::::::::::::::::::
VNG1310         ::::::::::::::::QV:NS::S:::::A:::L::::::::::::::::::::::::::
Hut0491         T::::::::::::G:EE::NA::::::A:A:::L:::::::::::::::::::::I:::L
rrnAC1091       VGVDPASAQ::::A:SD:::S::S:::::::::F::::::::::::::::::::M:::::
Hmu1789         I::::::::::::::E:::NG::::::A::V::F::::::::::::::::L::::::::I
hla1265         IPAADGATMLFQGSETDVF:G:IVS::G::L:::::::::::::::M:::T:::L:::::
HQ2997A         ::::::::::::::SPEA::T:I:S::::::::L::::::::S:::::::L:::::::::
HVO_2811        :::::::::::::S::TA::::I:A:::::V:::::::::::::::::::L:::::::::
Hbo2549         :::::::::::::T:Q:E::::I:T:::::V:::::::::::::::::::L:::L:::::

consensus       GLEAQDKSFYASLILTGAIVVASVPTFLAGAF-
#oth            .123..11...1132.11.21..1...24.334
NP4270A         :::::::A:::A::V:A::T:::I::::M::::
VNG1310         :::::::::::::V:::V::::::::::T::::
Hut0491         :::R::Q::::::VI::::A::::::::G:L-:
rrnAC1091       :::S:::::::::L::::::I:::::::G:KLA
Hmu1789         ::::::::::::MV:::::::::I::::G:KLV
hla1265         :::::::::::::::::::T:::I:::I:::::
HQ2997A         :ISG::Q:::::::::::::I:::::::::V:G
HVO_2811        :::::::::::::::::V::::::::::S:VSI
Hbo2549         ::H::::::::::A:::::::::::::V::V::