|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1952 | NP4402A | VNG0938 | HQ2238A | rrnAC3110 | Hmu2636 | hla0394 | Hut1695 | Hbo0439 | HVO_1003 |
1257 | NP4402A | 1976 | 1150 | 1019 | 1111 | 1139 | 1137 | 1182 | 1179 | 1164 |
1364 | VNG0938 | 1150 | 1971 | 1153 | 1222 | 1219 | 1166 | 1174 | 1179 | 1232 |
1418 | HQ2238A | 1019 | 1153 | 2395 | 1318 | 1334 | 1290 | 1293 | 1205 | 1233 |
1575 | rrnAC3110 | 1111 | 1222 | 1318 | 1985 | 1594 | 1385 | 1363 | 1410 | 1393 |
1576 | Hmu2636 | 1139 | 1219 | 1334 | 1594 | 1966 | 1387 | 1457 | 1423 | 1426 |
1636 | hla0394 | 1137 | 1166 | 1290 | 1385 | 1387 | 1964 | 1499 | 1453 | 1480 |
1583 | Hut1695 | 1182 | 1174 | 1293 | 1363 | 1457 | 1499 | 1958 | 1427 | 1480 |
1610 | Hbo0439 | 1179 | 1179 | 1205 | 1410 | 1423 | 1453 | 1427 | 2076 | 1538 |
1618 | HVO_1003 | 1164 | 1232 | 1233 | 1393 | 1426 | 1480 | 1480 | 1538 | 1963 |
340 symbols consensus MVALANLAFVFVAGLITALATGLGAIPFFFVDDISDRWNVALWGLASGIMVAASLFGLVR #oth 144334231.23..24.1111.3.11...223221.123.2...3.1...12..2..124 NP4402A -ML:EG:L::LA::IF::IVC:F:TL::::::E::::VT:::::::G:::LF:::::FIF VNG0938 :SPSGE:L::VF:::L:D:::::::L::::::::D:::R:G::::::::::S::G:::F: HQ2238A ::V::H::L::::::A::::::::::::::I:EF::::::G:::V:::::::::::::IN rrnAC3110 :::VE:VV:::::::L:::::::::::::L::EF::::::L::::::::::::::::::: Hmu2636 :ALVE::VL::::::L:::::::::::::V:::F::::::::::V::::::S:::::::: hla0394 ::::DAF:::::::::::::::I::L::::F:S::::G::::::F:::::L::::::::D Hut1695 :SL::::TL:::::F::::::::::L:::L:E::::Q:Y:::::::::::::::::::IF Hbo0439 -M::D:F:::::::F::::::::::::::::Q::::::::::::I:::::LS::V::::L HVO_1003 :DQF:A:T:::L:::V::I:::V::::::::S:V::::::::::V::::::S:::::::F consensus EGLA----------------YGTPIELGAGLLAGVALVVVAHRVI--------------- #oth .1141111111111111222413352333.332.121.3223322111111111111111 NP4402A :::R::::::::::::::::D::VF:V::::VV::VV::::D:I:::::::::::::::: VNG0938 :A:N::::::::::::::::::G:T:IA::A::::::::::EH::::::::::::::::: HQ2238A ::MQ:::::::::::::YASD:F:VLMLT:::T:::::EGSG::LSRIDINATGPDESGH rrnAC3110 ::::::::::::::::::::::S:VL:VP:V::::G::A:::ELL::::::::::::::: Hmu2636 ::::::::::::::::::::::S::L:VP::::::V::::G:::V::::::::::::::: hla0394 ::::::::::::::::::::E:::G:I:I:M::::::::L::D:L::::::::::::::: Hut1695 ::::::::::::::::::::E::A::IAI:MA:::V:::L::::L::::::::::::::: Hbo0439 :A:GEYISVSLAGISVSPIPTR:FLL:::::I::IV::::::D::::::::::::::::: HVO_1003 ::::::::::::::::::::N:::LQ::I:M:::::::L:::H::::::::::::::::: consensus -------------------------------------DDAEIEPKDYEEADFKKLLLILG #oth 11111111111111111111111111111111111113242541352231.321.2..2. NP4402A :::::::::::::::::::::::::::::::::::::TGY:F::R:IPD:::R::V::V: VNG0938 :::::::::::::::::::::::::::::::::::::::H:F::R:IAA::V:::A::A: HQ2238A GDDGYPRDEGNKQTDPAPDIGTDGGPEATPHIESQEH::NPL:AEVFADG:L:T:::::: rrnAC3110 :::::::::::::::::::::::::::::::::::::::FDQS::QF:Q:::T::::::: Hmu2636 ::::::::::::::::::::::::::::::::::::::SYDHH:EAF::::::::V:::: hla0394 :::::::::::::::::::::::::::::::::::::M::::D:QE:::::::::V:::: Hut1695 ::::::::::::::::::::::::::::::::::::::G:::D:QE:A:::Y:::V:::: Hbo0439 ::::::::::::::::::::::::::::::::::::::G:DVH::R::::::R::::::: HVO_1003 :::::::::::::::::::::::::::::::::::::EG::VN::Q::::::R::::::: consensus ILTVHSFPEGVAVGVSFADLGLEG-----GLQLFGFGVPLLAVFMTIAISIHNVPEGTAI #oth 1..1......1.2..1..12.2211111235523.342.3..1.1.3....1.1...2.1 NP4402A V:::::::::::L::A:::::I:::::::D:V:A:LAI:G::I:I:A::::Q:I:::L:V VNG0938 V::::::::::::::::::M:ID::::::::SVL::SI:I:::::::::::::::::L:V HQ2238A ::::::::::::::::::EI:FD:::::::IGI::I:I::::::::V::::::I:::::: rrnAC3110 ::::::::::::::::::E::::AATPESAVGIV:VS:::::::::V::::::I:::::: Hmu2636 V:::::::::::::::::E:::A:A:::ETVTVL:L:L:V::::::V::::::::::V:: hla0394 V:::::::::I:::::::::::::::::::T:::::T:::::::::L::::::::::::: Hut1695 ::::::::::::::::::E:::::A:::E:PI:::VT::I:::::::::::::::::::: Hbo0439 :::I::::::::I::A:::::::::::::::::::VV::::::::::::::::I:::V:: HVO_1003 ::::::::::::::::::::::D:::::::F:::::V:::::::::L::::::::::L:: consensus SIPLRSMGVSNWKMVWWAVFSSLPQPIGAVIAFAFVRLAREFLPFGFGFAAGAMIYLVLT #oth 1..11332343.2211211.1.1...1..12.12..25.231..2.1...2...11..12 NP4402A A:::HTY:IA:::IFG::::::I::::::G::YV::TT::::::::::::S::::F:::H VNG0938 ::::HEH:ARR:TL:GV:::T:I::::::G::YV::QI::AA::::Y:::G:::VF:::S HQ2238A A::M:A::L:K:R::GA:::::::::::::::::::TW:ES:::::::::::::::::V: rrnAC3110 A:::::L:::E:::::::::::::::V:::::YY::T::KA:::::::::::::V::::: Hmu2636 :::::TL:::E:::::::::::::::::::::::::::::::::::::::::::V:::V: hla0394 ::::::::::K::::::S::::::::::::V::::::Y::::::Y:::::::::::::VS Hut1695 A::::::D:GE:R:::::::::::::::::L::::::V::D:::Y::::::::::::::: Hbo0439 :::::::::P::RL:::S:::::::::::::::Y::::::::::V::::::::::F:::: HVO_1003 :::::::N:::::L::::I::::::::::::::Y:::I::::::::::::::::VF:::: consensus EFIPEALETGADLPGGGRRELAAGIAVGVAAMVPLAFV-- #oth 112..1115.54.144.232.43.343.114.2.232211 NP4402A DIF::G:DH:S::::H:::::LV:::::::I:L:VMLLTE VNG0938 ::::::R:V:GA::HN::::::T:::::::G:::ML::T: HQ2238A :::::::::::::EHS:Y:A::G:VIA:::V:I::LY::: rrnAC3110 ::V:::::Y:DG:::::K:::LT::::::L:::::::::: Hmu2636 ::V:::::Y:R:::D:::K::VT:AVA::LL::::::::: hla0394 :::::::::::::::::KPV::G::GL::LL::::N:I:: Hut1695 ::::::::::::::SR::P::T::VV::::I:::::LI:: Hbo0439 ::::::::R::E::R::::::C::::C::L:::::L:::: HVO_1003 ::::::::L:KR::R:::V::L::LTA:F:V::::::I::