|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1587 | HQ2567A | hla2286 | HVO_1669 | Hbo3168 | rrnAC0865 | Hmu1625 | NP2062A | Hut1100 | VNG1176 |
1169 | HQ2567A | 1635 | 1070 | 1119 | 1161 | 936 | 992 | 1060 | 1029 | 1041 |
1317 | hla2286 | 1070 | 1608 | 1204 | 1175 | 1105 | 1103 | 1153 | 1143 | 1151 |
1371 | HVO_1669 | 1119 | 1204 | 1659 | 1333 | 1158 | 1080 | 1157 | 1136 | 1146 |
1341 | Hbo3168 | 1161 | 1175 | 1333 | 1614 | 1137 | 1095 | 1140 | 1111 | 1110 |
1252 | rrnAC0865 | 936 | 1105 | 1158 | 1137 | 1603 | 1229 | 1136 | 1097 | 1095 |
1211 | Hmu1625 | 992 | 1103 | 1080 | 1095 | 1229 | 1623 | 1107 | 1116 | 1067 |
1283 | NP2062A | 1060 | 1153 | 1157 | 1140 | 1136 | 1107 | 1597 | 1152 | 1099 |
1250 | Hut1100 | 1029 | 1143 | 1136 | 1111 | 1097 | 1116 | 1152 | 1579 | 1156 |
1234 | VNG1176 | 1041 | 1151 | 1146 | 1110 | 1095 | 1067 | 1099 | 1156 | 1584 |
225 symbols consensus MS---------LPDGVERRDFGGEER-LATRGEPVYGEPT-ADGWRAWDPGRSKLGAMFE #oth 12333111111..3..2.161123421.2.4.311...321522..3.113.....1112 HQ2567A :KASSS::::::::::Q::Q:DNRS:::T:H:TT:::::RDT::::L::A:::::::::K hla2286 ::EPN::::::::A:::::EI:::T:::::::P:::::::::::::::::::::::G::: HVO_1669 ::DDGSAADAA::::::::T:::R::::S::::::::::VDS:::::::A::::::::L: Hbo3168 :TD::::::::::S:::::P:D:R::::S:H::T:::::RDE:::::::A:::::::::: rrnAC0865 :T:::::::::::S::::H:::::TS::::Q:Q:::::R::DGD::R:::H:::::::LA Hmu1625 VT::::::::::::::::H:::::TG::::::::::::A::DGA::R:::D:::::::LA NP2062A :::::::::::::K::Q:::::DG::::::E:P:::::::::::::Q:::R:::::::L: Hut1100 ::::::::::::::::T::A:D:TQS::::T:::::::S::SE:::Q:V:D::::::::: VNG1176 :::::::::::::A::Q::S::D:DGV:::::::A::::V:V::::R::AH::::::T:: consensus LGMDTGLVGGETVLYLGAASGTTVSHVADFAGPTYAVEFAPRPVRDLLEVAEPRDNLFPL #oth 3141...4.2121......2..........1.....1...1..211.141.34.31.1.. HQ2567A :DIE:::T:::SI:::::::::::::::::::::::I::::::::::::::TT:P::I:: hla2286 ::FE:::S:::::::::::::::::::::::::::::::::::A:::V:A:::::R:::: HVO_1669 :::::::::::S:::::::::::::::::::::::::::::::::::VG:::D::::::: Hbo3168 Y::::::::D::::::::::::::::::::::::::::::A:::::::G:::A::::::: rrnAC0865 H::::::G:::::::::::A::::::::::G::::::::::::::E::DA::S:R::::: Hmu1625 :::E:::A:S:::::::::A::::::::::::::::::::::::::::DA:D::P::::: NP2062A TDI::::::::::::::::A::::::::::::::::::::A::A::::TA::::P::I:: Hut1100 ::V::::A:::::::::::::::::::::::::::::::::::M:::::::AD::R:::: VNG1176 ::L::::S::DA:::::::N::::::::::::::::::::::::T:::A::DS:ER:::: consensus LKDARKPETYAHVVEP-VDAIVQDVATRGQATVALRNRQFLADDGRLLLAIKARSEDVTA #oth .1...5.22.1.1..32313211........5..33.21..21..1.2232.......13 HQ2567A :C:::Q:::::::::TDIEYLI::::::::::::::::::::P::K:I:M::::::::LS hla2286 :::::T:KR::::::SD::::::::::::::E::V::AR::::::::::::::::::::V HVO_1669 :::::D:DS::::::AGI:CL:M:::::::::::V:::::::::::::M:V::::::::: Hbo3168 ::::::::::::I::ADL:C::::::::::::::N::::::R::::::AV:::::::::: rrnAC0865 ::::::::S::::::::::VV::::::::::R::TL:K:::T::::::A::::::::::: Hmu1625 :::::E::S::::::::A:VL::::::::::L::N::AR::RP::::::S:::::::::: NP2062A :::::::D::T::::::::VLI:::::::::K:::A::R::R:::::::::::::::::: Hut1100 :::::A:::::::::::::::I:::::::::D:::S::R::R:::::VM::::::::::R VNG1176 :::::A:::::::::SG::::::::::::::D:::S:::::::::::VA:L::::::::: consensus DPDAVFDDVLAELREGYEILETARLDRFHDDHLGVVARPR----- #oth 1.22..233252.544.22432411212.2...111.2.341111 HQ2567A ::ED:::TIIST:::::I:QTRQ::::::::::A:::T:NM:::: hla2286 E:ET::EGA:DR:::T::::::Q::::::E:::::::T:K::::: HVO_1669 E::D:::::I:::DSA::L::::::::::A::::I::::K::::: Hbo3168 :::D::E:::T::::A::::::T::::::::::::::::K::::: rrnAC0865 :::::::S:R:::SAE::L:::::::PY:E::::I:::::KD::: Hmu1625 ::A:::E:::TT:E:R:::EASES:APH::::::::::::RDGTF NP2062A ::::::::::E::TT::D:V::RS:E:::E:::A:::E:SGD::: Hut1100 E:::::A::IDR:KT:::::DRQS:EPY:::::A:I::::::::: VNG1176 ::A:::E:L:GR::D:::VRA:::MEP::E:::A:::T:::::::