|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 4686 | VNG2612 | hla0153 | HQ1372A | HVO_0424 | Hbo1080 | NP0678A | Hut1023 | rrnAC2103 | Hmu0347 |
3864 | VNG2612 | 4669 | 3754 | 3514 | 3635 | 3583 | 3595 | 3553 | 3558 | 3626 |
4070 | hla0153 | 3754 | 4664 | 3730 | 3881 | 3864 | 3609 | 3677 | 3636 | 3749 |
3999 | HQ1372A | 3514 | 3730 | 4708 | 3855 | 4038 | 3459 | 3594 | 3572 | 3583 |
4086 | HVO_0424 | 3635 | 3881 | 3855 | 4626 | 4087 | 3566 | 3629 | 3614 | 3709 |
4123 | Hbo1080 | 3583 | 3864 | 4038 | 4087 | 4683 | 3526 | 3622 | 3616 | 3710 |
3917 | NP0678A | 3595 | 3609 | 3459 | 3566 | 3526 | 4699 | 3740 | 3684 | 3865 |
4003 | Hut1023 | 3553 | 3677 | 3594 | 3629 | 3622 | 3740 | 4666 | 3892 | 3950 |
4016 | rrnAC2103 | 3558 | 3636 | 3572 | 3614 | 3616 | 3684 | 3892 | 4671 | 4046 |
4114 | Hmu0347 | 3626 | 3749 | 3583 | 3709 | 3710 | 3865 | 3950 | 4046 | 4689 |
627 symbols consensus MADDSIAVVDLDRCQPDRCNYECANYCPPNRTGKECIVTRGE-YDEDDPYDGDPDQVRIS #oth .11........1..1....1...3.1.....1.1...22.21522221353.422.13.. VNG2612 :::::::::::::::::::::::S:::::::::::::TL::::----:AG:::::::H:: hla0153 :::::::::::::::::::::::::::::::::::::TK::::----:AAE:::::IH:: HQ1372A ::::::::::::::::::::::::::::::::::::::::SDY::D:E:F::::N:I::: HVO_0424 ::::::::::::::S::::S:::S:F:::::::::::TL::::----:AEQ:G::::::: Hbo1080 :::::::::::::::::::S::::::::::::::::::::::YFE::E::::G:::I::: NP0678A :S:::::::::::::::::::::V:F:::::::E:::I::E:R:ED::H:A:GA:::S:: Hut1023 :::::::::::::::::::::::S:F::::::::::::::EDH:::GE:HE:A:E::W:: rrnAC2103 ::E::::::::E:::::::::::M:::::::S::::::K:EDE:E::E:FE:Q::::::: Hmu0347 :::::::::::::::::::::::M:F::::::::::::K::DA:::::N:A:SD:::W:: consensus EEICLGESCGICVEKCPFDAIEIINLPQELDDEPVHRYGENAFALYGLPVPEEGRVTGIL #oth ..2....1.....1.......1.....3..413.2....2.1.1.....3.53.6...1. VNG2612 ::::::::::::::::::::::::::::::::Q:T::::::S:S::::::::S:K:::L: hla0153 :::::::T:::::::::::::::::::S:::E:::::::D:::S:::::T:KP:N::::: HQ1372A ::V::::::::::::::::::::::::V::E:D::::::::::::::::::DP:T::::: HVO_0424 :::::::T:::::::::::::::::::S:::E::T::::::::S::::::::A:S::::: Hbo1080 ::V::::T:::::::::::::::::::T::QE::I:::::::::::::::::P:A::::: NP0678A ::L::::::::::::::::::::::::::::EN:T::::A:S:::::::A:Q:::::::: Hut1023 :::::::T:::::::::::::Q::::::::T:D::::::D:::::::::A:G:::::::: rrnAC2103 :::::::::::::N::::::::::::::::T::::::::::::::::::S:A::Q::::: Hmu0347 ::::::::::::::::::::::::::::::G::::::::::S:::::::A:Q:::::::: consensus GPNGIGKTTAVRALAGEMTPNLGRYDEEP----DWDAVLDRYRGTELQNYLERLRDGDVT #oth .......1...22..1.32....43443211113.2212121...3..4.2343332122 VNG2612 :::::::S:::DL::::V::::::HESP::::::::E:V:E:::::::D::AAV:::::D hla0153 :::::::S:::H::::::V::::D:ES:G::::::ER::::F:::G:::::QS:KE:::: HQ1372A :::::::::::::::::LV::::E:TA:AAETAT:::::::::::K::T:I::I:SD:IS HVO_0424 ::::::::::::::::::V::::N::DD:::::T:E:::::F::::::::V:QV:::E:S Hbo1080 ::::::::::::::::::V::::T::::A::::T:E::::::::::::::I::V:EEE:S NP0678A :::::::::::HI::D:I::::::F:D::::::::E:::EA::::A::G::DD:V:::M: Hut1023 :::::::::::HI::D:L:::::DSATSG::::::::::EE::::A::D:::S:L::::: rrnAC2103 ::::::::::::I::D::Q::::::G:::::::S::EI::E::::A::E:::QM:G:::D Hmu0347 :::::::::::HI::D::::::::F::::::::A:K::I:E:::::::D:::D::E::M: consensus VARKPQYVDQIPNQFDGTTRELLEATDERGALDELIERLGIRPVVDQPIDTLSGGELQRV #oth 1.2......2..51...3132..141....21.3111124.31.2.131221........ VNG2612 ::K::::::E::A::::N::Q:::::::::V::D:VD::S::::M::A::S::::::::: hla0153 :::::::::::::::::N::::::R::::::::S::D::N::::M:::::SI:::::::: HQ1372A I:Q:::::::::G::::::G::::S::::::::SY:D::D::::I:::LS:::::::::: HVO_0424 I:::::::::::K:::::A::::::::::::::SY:D::D:G::::ND:E:::::::::: Hbo1080 I:::::::::::K::::I:S::::::::::K:::YV:::::A::::::L::::::::::: NP0678A :::::::::R::ES:::K:::::DGV::::VA:::V:::E:EA:I::::::::::::::: Hut1023 :::::::::E::D:::::::A:::G:::::V:::::::V::E:::::D:::::::::::: rrnAC2103 :::::::::R:::::::KAI:::DQ::::::::Y:V:QT::E::::NH::D::::::::: Hmu0347 ::::::::::::D:::::AS::::R::::::::D::::T::G::::NH::D::::::::: consensus ALAATLARDADFYFLDEITPYLDIGQRVTAARLIRELAEDE--DRSMLVVEHDLAILDLL #oth .11.2.1..1....1..21.....1..111.1.11.11113112111.1......1..1. VNG2612 ::::::::::::::V::L:::::::::::::::V::::::A:::KAV::::::::V::M: hla0153 :I::C::::::::::::::::::::::MIV::::::::D:DAAE:::::::::::::::: HQ1372A :::::::::R:::::::VS:::::A:::::::::::::::A::N:AV::::::::::::: HVO_0424 :::::::::R::::::::S::::::::::::::::::::::::::AV::::::::::::: Hbo1080 :::::::::R::::::::::::::::::::::::::::::::::KAV:A::::::::::: NP0678A ::::::V:::::::::::::::::::::::::::Q::S::-::::::::::::::V:::: Hut1023 ::V:A::::::::::::VS::::::::M::::::Q:M::E:::::::::::::::::::: rrnAC2103 ::V::::::::::::::::::::::::M:::::::::::E:::::::::::::::::::: Hmu0347 ::V::::::::::::::::::::::::M:::Q::Q::::::::::::::::::::::::: consensus ADTLHVAYGEPGAYGVITDPKSVRNGINEYLKGYLENENMRIRPEAIEFEEHAPRSTSKG #oth ..41111..1.111.11.2...112......2.1.2.....2.153.1.2.....44243 VNG2612 ::SI:::::::SV:::V:P::::::::::::R:::::::::V::::::::::::::A:RR hla0153 ::::::::::::::::V::::::::::::::::::D::::::::S::T:::::::VS:RS HQ1372A ::S::::::::::F:::::::::::::::::::F:S::::::::NK:::Q:::::K:A:S HVO_0424 :::::::::::::::::::::::::::::::::::S:::::::::::T:::::::E:T:A Hbo1080 :::::I:::::::::::::::::::::::::::::S::::::::DE:T:H:::::E:T:S NP0678A ::A:::::::::VF::V:P:::TKS::::::::::::::::::::::::::::::TE:F: Hut1023 ::VI::G::::::F:::::::::K:::::::S:::::::::::QD:::::::::::V:T: rrnAC2103 ::NIN::::T:::F::::P:::TKK::::::S:::::::::::QTD::::::::::A:Q: Hmu0347 ::A::::::::::::I::S:::TK:::::::S:::D:::::F:QQE::::::::::V:T: consensus DPLIEYPDLSKSYGDGEFSLDVEAGTIRESEVLGVVGPNGIGKSTFAKLLAGRLE--PDA #oth 22121..324....21..2.3..2.3.332....1..........1.111114.211.22 VNG2612 :T:VS:::MT::::::::T:S::G:D:NRN:::::::::::::::::Q::::G:::::SS hla0153 ET:::::E::::::::::E:H::G:E:NR::::::::::::::::L:::F::S::::::E HQ1372A T::::::AI:::::TD::::E::S:::Y:::::::::::::::::L:::FT:A::SD::S HVO_0424 E::V:::::A::::::::::E::S:::YNG:::::::::::::::L:Q:FT:D:T::::: Hbo1080 E::V::::::::::E::::::::::::YQ:::::I::::::::::L::MF::G::::::E NP0678A ET:V:::::T::::::::T::::G:Q:QNN::::I:::::::::::::::::::D::::S Hut1023 :VV::::G:E::::E:::::S::::Q:::::::::::::::::::::::::D:::::::: rrnAC2103 :VV::::E:Q::::::::::::::::::::::::::::::::::::::M:::::::::T: Hmu0347 :VVA:::::T:::::::::::::::Q:::::::::::::::::::::::::::::::::: consensus ------GELDFALDIAYKPQYIEIDQPMRVDAFLSSITDDFGSSYWNTEIAQPLQLDRIM #oth 1111112431351..1.....112..1....1..3.11211.1...2..112....241. VNG2612 VGGEAGAA::VG:::::::::V:A::Q:::::::::V:::V:T:::Q::::D:::::P:: hla0153 ::::::::::::::::::::::D::::::::V::::::::::::::::::::::::::V: HQ1372A ::::::QS:S:Q::::::::::::::::::::::::::N:::T:::K:::S:::::EQ:: HVO_0424 :::::::D:::::::S:::::::::::::::::::::::Q:::::::::::N::::N::: Hbo1080 :::::::::::R::::::::::::::::::::::::::::::T:::K::V:N::::N::: NP0678A :::::::SF:AD:::S:::::V::::::::::::R::::::::::::::::::::::::: Hut1023 ::::::::::ASV::S:::::V:V::::::::::G::AE:::T::::::::::::::::: rrnAC2103 ::::::::I:TS::::::::::::::::::::::A:::::::::::::::::::::ESV: Hmu0347 :::::::TV:AD:::::::::::::::::::::::::::::::::::::::::::::AV: consensus EQNLTDLSGGERQRVAIAACLSEDADLYLLDEPSAHLDVEQRVQATSAIRRYAENHDATV #oth .13.3..............1..41..1.11.............3..2....11.1113.1 VNG2612 ::R:P::::::::::::::T::K::::::::::::::::::::L::R::::F:::NES:: hla0153 ::::S::::::::::::::::::::::::::::::::::::::R::T::::::::::::: HQ1372A :R::D:::::::::::::::::D:::::VM:::::::::::::::::::::::::N:E:: HVO_0424 :R::::::::::::::::::::Q::::::::::::::::::::::::::::::::::::: Hbo1080 :R::D::::::::::::::T::::::::VM::::::::::::::::T::::::::::::: NP0678A ::D:::::::::::::::::::KE::I::::::::::::::::L::R:::::T:T::K:A Hut1023 ::Q:::::::::::::::::::R::::::::::::::::::::L:::::::::::::::A rrnAC2103 ::Q:::::::::::::::::::K::::::::::::::::::::M:::::::::::::::A Hmu0347 ::Q::::::::::::::::::::::::::::::::::::::::M:::::::::::::::A consensus MVIDHDIYMIDLLADRLMVFDGEPAEEGHASPPQEMREGMNDFLSNLDITFRRDERTGRP #oth 1........1..11...2..1.2.136.2.44.13..3...3..31..1.......12.. VNG2612 ::::::::::::VS::::::::::::H:Q:::::A::S:::E::A:::V:::::::L::: hla0153 ::::::::::::::::::::::::::R:::T::::::D:::E::AD:::::::::::::: HQ1372A L:::::::::::::::::::::Q:S:Y::::A:::::A:::::::D:::::::::::Q:: HVO_0424 :::::::::M::::::::::::::SI:::::K:::::D:::::::D:::::::::::Q:: Hbo1080 ::::::::::::::::::::::::SV::::RT:::::A:::::::D:::::::::::Q:: NP0678A :::::::::::::::::Q::E:T:::H:R:GS:VG::::::T::::::V::::::::::: Hut1023 :::::::::::::::::L:::::::VA::::T::S::S::::::G::::::::::::::: rrnAC2103 :::::::::::::::::L:::::::KN:::A:::G::::::E::Q::::::::::::S:: Hmu0347 :::::::::::::S:::L:::::::KQ::::::V:::::::Q::::::V::::::::S:: consensus RINKPGSQLDREQKRAGEYYYAP---- #oth .....2.11.23..33.....233211 VNG2612 :::::D::::KQ:::D:::::TT:::: hla0153 ::::::::::SS:::D:::::SG:::: HQ1372A :::::::::::R::QQ::::::::::: HVO_0424 :::::D::::::::::::::::E:::: Hbo1080 ::::::::::SQ:::E:::::STSN:: NP0678A ::::::::K:::::KQ:::::::AENQ Hut1023 :::::E:R::::::Q::::::::E::: rrnAC2103 :::::D::::::::N:::::::::::: Hmu0347 :::::::::::Q:::D:::::::::::