Home |  Text search
[S] (-) COG2106 Uncharacterized conserved protein
9 genomes BUD0702 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1688

rrnAC1612

HVO_2565

Hbo2288

Hmu2039

Hut3008

hla0833

NP4852A

HQ2843A

Pairwise sequence scores
Consensus score2117 hla0833 HQ2843A HVO_2565 Hbo2288 VNG1688 NP4852A rrnAC1612 Hmu2039 Hut3008
1393hla0833 2152 1243 1257 1267 1219 1198 1241 1260 1189
1511HQ2843A 1243 2258 1441 1559 1298 1269 1350 1318 1316
1613HVO_2565 1257 1441 2124 1666 1416 1326 1380 1367 1378
1657Hbo2288 1267 1559 1666 2084 1441 1354 1429 1406 1440
1618VNG1688 1219 1298 1416 1441 2117 1386 1430 1413 1446
1609NP4852A 1198 1269 1326 1354 1386 2100 1422 1506 1529
1730rrnAC1612 1241 1350 1380 1429 1430 1422 2118 1699 1551
1723Hmu2039 1260 1318 1367 1406 1413 1506 1699 2127 1539
1691Hut3008 1189 1316 1378 1440 1446 1529 1551 1539 2275

324 symbols
consensus       ----MTLSVLVPSSLVREAEDKREATRKLGYVARAAAVFRVDRLVVFPDRDGE-RRWGDG
#oth            11111222211...13.....3......1..1..1.2.1.2121211..23.21233122
hla0833         MRTEDG:TIC::::V::::::A::::::::::::::::::A:::::::::E:::::R:GE
HQ2843A         ::::::::::I:::V::::::::::::::::I::S:T:::::H:I:::::G:::::L:GE
HVO_2565        :::::K:::::::::::::::Q::::::::::::::::::ANE::::::E::::NN::GE
Hbo2288         ::::::::::::::::::::::::::::::::::::T:::A:::I:::::E:::::::RK
VNG1688         ::::::R:::::::::::::::::::::::::::::::::I::V:::::E:::::Q::G:
NP4852A         ::::::R::::::::T::::::::::::::::::::T:::::::::Y:::::DDG:F:::
rrnAC1612       ::::::T::::::::A:::::R::::::::::::::::Y:::::T:Y::P::A:GK:E::
Hmu2039         ::::::T::::::::::::::R::::::::::::::V:::::::TI:::PA:A:GK:E::
Hut3008         :::::::NA::::::C::::::::::::I:::::::T:::::::I:Y::P::A:G:::::

consensus       FVETVLRYAATPPYLRKEVWGRRDELEYVGVLPPLRVRSQTGSGSDGSGSLRQGIVTEVG
#oth            1.2...2..1..12...24124.1..311.1...111323.113132121121.1..1..
hla0833         Y:R:::G::::::E:::DL::E::::R::::::::::PWR:::TPS:EE:KT::L:::::
HQ2843A         :::::::::::::H:::KI::::::::::::::::::S:T:::E:TD::::T::::::::
HVO_2565        :::::::::::::::::::::K::::R:A:I:::VL:A:T:ADD::E:PA::E:::::::
Hbo2288         :::::::::V:::::::::::H:::::::::::::L:S:T:::E::D::::Q::::::::
VNG1688         ::::::::::::::::::AFDT::::A:A:::::::LS:W:::D:S:::::::::::Q::
NP4852A         ::S:::E:::::A:::::::D::G::::A:I:::::::::::::::::::::::::::::
rrnAC1612       :::::::::::::H::::M::K:::::::::::::::::::::::E::::::::::::::
Hmu2039         :::::::::::::::::::::K:::::::::::::::::::::::E::::::::::::::
Hut3008         ::::::::::::::::::A:E:::::GC:::::::::AT:::::::D:::::::::::::

consensus       PDGRVRVNCGM-QHPISLPVPPDMEV-EEGERVTIRVSSREPVRAKIVDEPLPGFDVDRA
#oth            211.....12111..1..52.43252152.1..11.1...1....11115143.14.343
hla0833         :E::::::SPLRE:::::L::SG:::::Q::::::::::::::::R:TGK:EE::Q:VE:
HQ2843A         ::D::::::EL::::V::H::ESVS::R::T::A::I::::::::R:::T::S::::SCL
HVO_2565        ::D:::::::::::::::F:::G:DL:T:::::AV:I::::::::R:::::::::::S:M
Hbo2288         ::::::::::::::::::YT:S::M::K:::::A::I::::::::R:::::V:::::S:M
VNG1688         SE::::::::::::::::HE::G:A::S::::::::::::R:::::L::D:::::S:E:T
NP4852A         ::::::::::::::::::::::S::::GK:::::::::::::::::L:::SP:::A::C:
rrnAC1612       A::::::::::::::::::::A::D:::Q:::::V:::::R:::::L::A:TT::::VA:
Hmu2039         A:::::::::L::::::::::SA:::PG::::::V:::::R:::::L:::::T:YV::T:
Hut3008         S:::::::::::::::::A::G:RTI:K::::::V:I:::R::::::::Q:P::YQ::::

consensus       DLDAALERADAGVRIATSRHGEPLSVDRLGDLAER-DAAGGMTVAFGAPERGLPAILG--
#oth            32531.52321.321.2..2.2312263.3424423562424.11..1.1....511111
hla0833         ::SE::--:GD:LAV:::::::E:::S::::IVSDARK:::Y:::::S::::::EM::::
HQ2843A         ::VD:::H:A::ITV::::::DTVTTG::PE::A::VNRA:A:I:::::G::::V:::DD
HVO_2565        ::TE::G:P::::::::::Y::::::PT::::TA:ITD::::::V::S:G::::DM::::
Hbo2288         ::EE::G:::::IT:::::F::S:T:PK:A::SP::IERE:A::V::S:G::::D:::::
VNG1688         G:GD::D:S:::::::::::::::::AS::GYR:::I:RD:V::::::::::::PM::::
NP4852A         TIE:S:A:P:::::::A:::::T::::::DGIVG::TT:N:F::::::::::::E:::::
rrnAC1612       ::::::S:D:::LT::S::Y:::VTST:::Q::::R::E:::::::::::::::S::D::
Hmu2039         :V:T::::S:::FA::A:::::E:G:::::Q:V::R:D::H:::::::::::::::F:::
Hut3008         N:::::S:P:::::::A::::QS:TTE:::R::GTIAS::D:::::::::::::::::::

consensus       -------------VSPDAVDP---------------------DEPSDGP-GFDLWLNTIP
#oth            111111111111144144376323111111111122122222353524231..1....1.
hla0833         :::::::::::::L:::GIRAAVAD:::::::::::::::::GRSVEPDP::::::::::
HQ2843A         NAPDSQTQTDEKT:::AN::TT::::::::::::GDNTASEVV::NVD::::::::::::
HVO_2565        :::::::::::::MP:ED:AD:::::::::::::::::::::V:::V:::::::::::::
Hbo2288         :::::::::::::IDAEE:T-:::::::::::::::::::::V:::::::::::::::::
VNG1688         :::::::::::::::A:::NESVT:::::::::::::::::::SSA:A:AR::A::::::
NP4852A         :::::::::::::CE:REE--:::::::::::::::::::::AIGDEPEAR:::::::V:
rrnAC1612       ::::::::::::::A::::GG::::::::::::::::::::::QT::E:E::::::::V:
Hmu2039         :::::::::::::LD::DAV:::::::::::::::::::::::GTG:DDA::::::::V:
Hut3008         ::::::::::::::E:G::::STVDELAAAVDAAERNDETVTGSG:::::R:::::::V:

consensus       NQGSEVVRTEEAMFATLASLTLTE
#oth            4.1.........2111.23..111
hla0833         A:A:::::::::L:V::G::::::
HQ2843A         Q::::::::::::::S::L::I::
HVO_2565        R::::::::::::::S::::::::
Hbo2288         R::::::::::::::S::::::::
VNG1688         D:::::::::::VL:::G::::::
NP4852A         ::::::::::::L:::::P:::E-
rrnAC1612       ::::::::::::L::S:TC:::::
Hmu2039         ::::::::::::::::::::::::
Hut3008         :::::::::::::::::GP:::::