Home |  Text search
[U] (SBH1) COG4023 Preprotein translocase subunit Sec61beta
9 genomes BUD0705 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG2599

rrnAC2111

HVO_0437

Hbo1068

Hmu0343

Hut1015

hla0176

NP1308A

HQ1302A

Pairwise sequence scores
Consensus score380 VNG2599 hla0176 NP1308A HVO_0437 Hut1015 Hbo1068 HQ1302A rrnAC2111 Hmu0343
271VNG2599 382 234 253 256 213 269 267 232 238
280hla0176 234 390 259 240 226 268 274 227 229
308NP1308A 253 259 385 263 223 288 304 234 265
334HVO_0437 256 240 263 389 250 324 330 249 238
276Hut1015 213 226 223 250 306 273 272 237 241
355Hbo1068 269 268 288 324 273 388 351 255 272
376HQ1302A 267 274 304 330 272 351 386 284 291
278rrnAC2111 232 227 234 249 237 255 284 385 306
283Hmu0343 238 229 265 238 241 272 291 306 407

58 symbols
consensus       MSSGQNSGGLMSSAGLVRYFDAEDRNAIRIDPKTIVAFGVLFGVGVLVLNALA-----
#oth            1222222111...........2.12122331.1112.31221.232131244341111
VNG2599         :::::::::::::::::::::S::S::LQ:::RSV::V:AF::LV::LAQFF::::::
hla0176         ::::S::::::::::::::::S:::D::A:::::VL::C:::::F:QI:SLTVA::::
NP1308A         :::::::::::::::::::::E:S:::PTM::R:V::::::L::F::M::::::::::
HVO_0437        ::K::::::::::::::::::::::::::VN::::F:A:A:::I::::::S::F::::
Hut1015         ----------:::::::::::::::::::::::::::::A::::L:::::LV::::::
Hbo1068         :::::::::::::::::::::::::::::L:::S:::::L::::::::::VV:F::::
HQ1302A         ::::::::::::::::::::::::::S::::::::::::::::::::::::::I::::
rrnAC2111       -M::SDG:::::::::::::::::Q:T:::::R::::T::M::LLM:::::MIV::::
Hmu0343         -M:SSD::::::::::::::::::S:T::M::RSV:::::::::LI:M::::FILGAV