Home |  Text search
[S] (-) COG4276 Uncharacterized conserved protein
9 genomes BUD0711 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1120

rrnAC0776

HVO_1712

Hbo3121

Hmu0749

Hut1280

hla1749

NP2750A

HQ2538A

Pairwise sequence scores
Consensus score1281 VNG1120 hla1749 NP2750A HQ2538A Hbo3121 HVO_1712 Hut1280 rrnAC0776 Hmu0749
722VNG1120 1268 634 600 588 547 605 573 592 621
874hla1749 634 1329 671 692 691 762 628 643 712
918NP2750A 600 671 1267 763 752 717 724 689 771
886HQ2538A 588 692 763 1246 800 800 646 691 755
880Hbo3121 547 691 752 800 1260 788 631 673 738
930HVO_1712 605 762 717 800 788 1278 695 702 749
857Hut1280 573 628 724 646 631 695 1275 691 760
932rrnAC0776 592 643 689 691 673 702 691 1290 890
969Hmu0749 621 712 771 755 738 749 760 890 1264

171 symbols
consensus       MATYERQTRVDAPLEDVWEFHSTIDGLEALTPDWMNLRIESVRGPDGEPDPDELTAGSRI
#oth            .4216.62115.12341.3..1241..41...513315224231.1.351112142.152
VNG1120         :Q:FK:DL:::::::S::A::::V:::L::::E:A::TV:D:VW:Q:QR:G:::V::T::
hla1749         :P::R:T:::P::IDE::A::::::::RE::::::H:Q:AG:E:::::::::V::E::Q:
NP2750A         ::::H:E:H:R:SF:::::::A:T::::::::SFLG:TV:::T::::::::EV:A:::::
HQ2538A         ::::S::::I:::::S::D:::Q:S:::::::S::::E::::T::::TTN::V:V:::T:
Hbo3121         ::::T:C::IG:::STI:::::DES::::::::::G:D:V:::::::TL::ET:D:::K:
HVO_1712        :PV:Q:R::IA::::R::::::DVS:::::::A::R:D:::::::::DD:::::V::TE:
Hut1280         :S::::SVH::::F:::::::::::::D::::G:V:::A:::::::::E::::MIV:TTA
rrnAC0776       :DI::::V::E:::AE::K::A:G:::V::::::::I:::AE:::::::N::::::::VV
Hmu0749         :SV:::SV::::::A::::::::G::::::::N::::VV:ES::::::::::V::E::V:

consensus       EMSMRPFGVGPRQRWTSRITAREA----GDDTAM-----FRDEMVGGPFAHWEHTHRFYA
#oth            52132.1113.2.31115.23.35111143421411111.2.4.53...54.3...3.4.
VNG1120         N:AVE::::::::T:::V::E:AT::::E::H:Y::::::V:T:EN:::PE:::::S:::
hla1749         R::I::::::::::::::::E:DP::::H:E::LGDRAH:I::::::::RT:::::A:::
NP2750A         ::::::L::A:Q:::::V::H::R::::DG::GS:::::::::::D:::TE:::::::R:
HQ2538A         K:::::L:IT:Q:Q:::A::::K:::::::G:::::::::::::R::::ST:V:::::F:
Hbo3121         R::::::D:::A:::::H:V:::L::::D:Y:::::::::::::I::::KK:V:::::::
HVO_1712        :::::::::::::::::::LD::::::::ET::W::::::::D::::::SR:V:::::V:
Hut1280         IV:L:::::::::ES:T::VE::RTGGD:RE:GY::::::V:::S:::::::R:::::E:
rrnAC0776       :S:IK::::P:::Q:V:N:V:::E:::::E:E::::::::::V:EE:::P::::::T:R:
Hmu0749         VS:V::L::::::T:::E:V:::E::::S:EH::::::::::H:TE::::::L:::::V:

consensus       DGD-ETLVHDRVEYELPGGPLGRAAGPFGVVGFEPMFRYRHRRTKQLLE--
#oth            33315.335.3.212212.32.333222263.322..14..24.2431142
VNG1120         ::::Q:VLR:::A::P:L:G::AVGA:PVLW:---:::F:::Q:RATFGEA
hla1749         :VE::::LV:T:A:R::F::::D:::::AK::::G::QD:::::ISRF:S:
NP2750A         ::::G:V:S:T:R::F::::A::LVS:L::::::::::::::::R::::D:
HQ2538A         ::T:T:IL::E:R::F:::F::DILST:::I:::::::D::QT::KQ::::
Hbo3121         ::E:K::ME:H::::F:::GV:::VS:L:II:L:::::Q::AK::A:::::
HVO_1712        ::::::I:E::::::::F::::DL::V::G::::G:::A::AE::R:::EQ
Hut1280         VEG:G:RIT:H:::R:A::A:::L:S:LA::::A::::::::E::::::::
rrnAC0776       LS:R::::::H::F::::::::::L::::CL:M::::::::QQ::K:::G:
Hmu0749         E:::A:::::::::QF::::::K:V:::AY::::::::::::T::::::::