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Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1908 | HQ2403A | NP3964A | hla2673 | VNG1252 | Hut1238 | rrnAC1137 | Hbo0215 | HVO_1336 | Hmu1441 |
1215 | HQ2403A | 2217 | 946 | 1026 | 954 | 937 | 1049 | 1127 | 1004 | 1001 |
1225 | NP3964A | 946 | 1865 | 995 | 949 | 1062 | 1043 | 996 | 1028 | 1104 |
1357 | hla2673 | 1026 | 995 | 2082 | 1054 | 1101 | 1066 | 1182 | 1175 | 1084 |
1252 | VNG1252 | 954 | 949 | 1054 | 1901 | 1080 | 1083 | 1022 | 1059 | 1155 |
1372 | Hut1238 | 937 | 1062 | 1101 | 1080 | 1909 | 1205 | 1156 | 1193 | 1256 |
1362 | rrnAC1137 | 1049 | 1043 | 1066 | 1083 | 1205 | 1914 | 1168 | 1179 | 1189 |
1461 | Hbo0215 | 1127 | 996 | 1182 | 1022 | 1156 | 1168 | 2041 | 1268 | 1155 |
1469 | HVO_1336 | 1004 | 1028 | 1175 | 1059 | 1193 | 1179 | 1268 | 2007 | 1179 |
1403 | Hmu1441 | 1001 | 1104 | 1084 | 1155 | 1256 | 1189 | 1155 | 1179 | 1899 |
305 symbols consensus --------------PLVEPVPGEPAAVADTGD----ERALVVADYHAGIEAGLRYE-GVE #oth 11111112333344351..2325.1.2144452222214.21..1.....31..321.1. HQ2403A MPTDTDTDTDAATG:::::L:SV:::I:RIET:::::T:::I::::::::I:::::R::: NP3964A ::::::::::::::-ML:::F:::L::::C:P::::::V:::::::::::V:::AD:::: hla2673 ::::::::MAPGAS:A::::V::::::::L::::::R:L:L:::V:::::V:::::R::: VNG1252 :::::::::::::MA:::::L:::::::E::G::::G:::::::::::::VS::RK::L: Hut1238 ::::::::::::::MA::::::A:::TVEVP:::::G:::::::V:::::::::K::::: rrnAC1137 ::::::::::::::MR:::L::V:::TV::DG::::::L:A::::::::::::::::::: Hbo0215 :::::::MARRGDG:I::::::D:::::HL:PNAGD:T::::::::::::::::::R::: HVO_1336 :::::::::::VPE:::::I::H:::::R:SRRGFP::S:::::::::::::::::R::: Hmu1441 ::::::::::::::MG:::::DS:::::T::E::::::C:::::::::::R:::R::::: consensus LDSAADVRRERLLSLLAETDADRLVVLGDLGHRIGAPAGDEREELRALFDAVTDRVPVTV #oth 1515135.1311252243362..1221..2112.14.643.23.26514533542114.1 HQ2403A :::N:ED::R:::E::TQHPV:::II:::A:::::N::DE:TQ::MS::TS:LN:::I:: NP3964A :R:::EK::K::::AIESELV::CLF:::::DS::S:SRT::A:::E:LS::::H::::: hla2673 :::R::E:::::CG:I:::::::::I::::A:::A::E:::::::VE:IR:::::::M:L VNG1252 VEGRGPQ::R::RR:VR:EG:::::::::V::A::::EEA:::::A::::::D--::A:: Hut1238 :A:G::Q:::NV:::V::::P:::I:::::::A::T:QR:::::IDR:VSEI:E:::L:L rrnAC1137 :Q:::EA::::::TC:RRAR::::::I:::::A::D:FA:::A::ET::::LD--::::L Hbo0215 :::D::::LA:::R::D::NP::::::::::::::::K:::AD::ETFVERTVA:::I:L HVO_1336 :P:K:A::::::::::DR:::::::::::::::::D:D:::A::::D:AA::A::TEL:: Hmu1441 :A:D:::::A:::D:::::AP:::::::::A:S::D:::A::::VT::L:::E--::::: consensus VRGNHDGGIEEVFADD----------VNVTDGSGVRLG--------------SVGFAHGH #oth 14....212234552533211111112412234.432.111111111111114..13... HQ2403A ::::::A:::S:ATTVETDSTQIEHTI::::A::IKC:::::::::::::::H:::V::: NP3964A TK::::::::SITEAFDA:::::::::::V::R:TTI:::::::::::::::::::C::: hla2673 :E::::A:VA:A::::::::::::::LD:IGAG:GV::GDGGERDDDTTTGTG::VL::: VNG1252 :V::::S:::D:VPA::::::::::::T::PSD:AV::::::::::::::::D::::::: Hut1238 :K:::::E::SLL::REG:::::::::AI::::::::::::::::::::::::::::::: rrnAC1137 :K::::::L:P:LS:LDAD::::::::E::P:H:T::::::::::::::::::::::::: Hbo0215 :::::::::A:A:G:R::::::::::ID::::::I:::::::::::::::::R:::V::: HVO_1336 :P::::::LADF:G:::::::::::::E:::PG:::::::::::::::::::D:::C::: Hmu1441 :::::::::D:LC::AATP::::::::T::PSD:::I::::::::::::::::::::::: consensus TWPSREVLEADVVCVGHEHPAVRLEDEVGGSRKERAWLRGPLDPAPFAEHDD-------- #oth 1..3441232112141....31.12.4...4132.1....433243.6456333111111 HQ2403A S::DET::DC::L:::::::QL:VA:H::::QQT:::::::::WT::KNKLGIERSFDSP NP3964A ::::AS:IG::::V::::::L:::::::::G:T::V::::RI:::G:PDN:T:::::::: hla2673 :::NP:L:D:::::M:::::Q:::::A:::::V:::::::E:::TA:VKDGEVD:::::: VNG1252 :::::A::::ET::I:::::::::T:D:::T:VQ:::::::::::::TD:YG:::::::: Hut1238 :::APD::A:ET::I:::::V:::::::::R::::V::::AI::V::R:::::::::::: rrnAC1137 :::APD::::::::::::::V:::::S:::AQ::::::::S:VTE::::QF::::::::: Hbo0215 ::::C::V:SE:::AA::::::::A:S::::::::::::::MN:D::::ALGLD:::::: HVO_1336 ::::::::A:::::SA::::::::::::::A::::V::::A:A:EV::::HEVV:::::: Hmu1441 :::::A::G:::I:::::::V:::::::::R:V:::::::RV:::::ESQS::::::::: consensus ----EAARADPDLVVFPAFNDRSGGTWVNVDGQEFLSPFLPDGLAD--GDAYLLDGTRLG #oth 1135654755322211....12....21.23222..1....21432112211.1...... HQ2403A DNTQNVN:DP::VIL:::::E:::::Q::T:-EG:::::::AAFEKNHT::::::::::: NP3964A ::::----VGDR:::C::::E:::::RI:-ERD::::::::::::::::::::::::::: hla2673 :::PA::TDP:E::::::::E::::::::::::S::A:::::A:PA:::::::::::::: VNG1252 ::::::VD:HG::A:::::::L:::::::::::G::A::::A:CP:::AEL::Q:::::: Hut1238 :::DTRLQV:GE:::::::::L:::::I::A::S:::::::E:::::::T:::::::::: rrnAC1137 ::::QPVENA::I:::::::::::::::::::::::A::::E:M::::TE:F:::::::: Hbo0215 ::VV:L:WQS:E::::::::::::::::::E::::::::::::VF:::A::::::::::: HVO_1336 ::PA:V::::AE:::::::::T::::::::P::G:::::::::::::::E:::::::::: Hmu1441 ::::G:LGI:A::::C::::::::::::::A::::::::::A:::::::E:::::::::: consensus PYRSV #oth 31241 HQ2403A ::Q:: NP3964A :::D: hla2673 DF:RI VNG1252 RFDR: Hut1238 ::DQI rrnAC1137 A::Q: Hbo0215 ::::: HVO_1336 D::N: Hmu1441 R:::I