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9 genomes BUD0714 9 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi

VNG2376

rrnAC2664

HVO_0006

Hbo1489

Hmu3102

Hut2323

hla0552

NP0548A

HQ1004A

Pairwise sequence scores
Consensus score1020 VNG2376 hla0552 HVO_0006 Hbo1489 HQ1004A NP0548A Hmu3102 Hut2323 rrnAC2664
477VNG2376 980 337 357 342 358 400 399 408 400
585hla0552 337 1061 436 412 463 463 527 496 465
639HVO_0006 357 436 1064 541 479 472 441 500 465
647Hbo1489 342 412 541 1060 566 511 486 477 490
630HQ1004A 358 463 479 566 1247 527 481 488 520
671NP0548A 400 463 472 511 527 993 516 529 576
700Hmu3102 399 527 441 486 481 516 1058 625 641
762Hut2323 408 496 500 477 488 529 625 1131 617
707rrnAC2664 400 465 465 490 520 576 641 617 995 

175 symbols
consensus       --MDVRDAVEADAEALAALADAPIDVMRNLVHDRTVRVAE------DP------------
#oth            11141.1.324.22321332251521312211..1.11.345343243412221111111
VNG2376         :::H::::TAG:TA:V:G::A:D::AA:-:IR::::Q::V::::::--::::::::::::
hla0552         :::RI:::L:S::::::TAT:R:RG:VK:MI:::S::::VTG:::::GE:::::::::::
HVO_0006        :::::::::DT:::::::V:::::RA::R:IR:::::L:TAETSS:::H:::::::::::
Hbo1489         MDAE::::L:T:::S:::I::V:T:::::V::::::::::RHRDAT::N:::::::::::
HQ1004A         ::::::::::S:V:T:G:I::L:A:AL::V::::::::::RQTTDTESHTDAHDETNRLT
NP0548A         :::N::::::::::R::::T:::T::::::I::::::::D::::::--::::::::::::
Hmu3102         :::EI:::::::::RM:E:SGS:P::::::::::::::::::::::T:A:::::::::::
Hut2323         ::::::E::::::D:::E:::S:V:::::::::::::::VDPDRADG:ATEQS:::::::
rrnAC2664       ::::I:::I:D:::R::::::G:P::::::::::::::::::::::--::::::::::::

consensus       ---------------DDADADDEAVIGFVSFDVRDGTVHVTQLAGSEEACERLLEEPIRF
#oth            11111111111111135444344524..221123452111.233.3462324.232.53.
VNG2376         :::::::::::::::-AD:G:::D::::L:YETGRDA::I:RI::DA::V:A::DP:QT:
hla0552         ::::::::::::::::SG:D:KP::T::IA::::GK:::::DFD:D:Q:IR::F:::R::
HVO_0006        :::::::::::::::A::P::::P:L:::G::::::VL:::R:G:T:A:VR::::::L::
Hbo1489         :::::::::::::::A::::AEAELL:::A:::::A::::::VG::V::V:H::S::V::
HQ1004A         TSGEQTGNEADESTAEESNENKPDI::::A:::::::::::::::EATIA:T::S:::::
NP0548A         :::::::::::::::-----:::T:E:::::::QA::::::::E:DC:L::::::::A::
Hmu3102         ::::::::::::::::GDEE:GP::T::::::A:ES::::::IG:::K::A::ID::VS:
Hut2323         :::::::::::::::::G:D:SVPI:::::::A::E::Y::::::::P::A:::::::::
rrnAC2664       :::::::::::::::-----E:DSIV::::::AER:::::::::::SD:::E::TD::E:

consensus       ARREGMDVELLVP-EDEADARAAAEAAGFERTGPGPRFEGEPTTRYRLDPD----
#oth            .34.625..3132153254454131512.366.5..3.5244.2.1332355344
VNG2376         :T::TLP::VVR:ANGTD:IT::LV::S::SA::::V:A::::::::WE:-::::
hla0552         ::::::S::AV:::N::-QTG:IL:D::::QS:T::::::RQ::::VI:SAELDR
HVO_0006        :SA:DLP::V::L::S::PLCE:V:HV::D:V:H::::::S::L::V::ETG:::
Hbo1489         :SN:QL:::F:AL:SSDT:LHE:::R:::::V::::A:MN:E:V:FQI::-::::
HQ1004A         :AT::F:::FV:::MS:EN:T::::N::::PI:R::::GD:T:::::F:AE::::
NP0548A         :AC:E::::::::::TDT::AD::VE::::EC:R::::D:VG::::EWQ::A:::
Hmu3102         ::::::N::V:LT:A::EA::T:I:D::::DE::::Q:::Q:::::::E:GRARQ
Hut2323         ::::A:V:::::::DG::AV:N:::::D:AT::S::::S:R:::::::E::PDAA
rrnAC2664       ::::H:T::::L:::::SQV:T:V::V::TS::N::::D:QE::::::E:ERAEH