9 genomes BUD0719 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG1381 rrnAC2893 HVO_0093 Hbo1403 Hmu2796 Hut0628 hla0537 NP0698A HQ3439A

Pairwise sequence scores
Consensus score	2596	NP0698A	rrnAC2893	Hmu2796	Hut0628	hla0537	VNG1381	HQ3439A	Hbo1403	HVO_0093
1607	NP0698A	2602	1390	1554	1383	1385	555	1294	1377	1351
1672	rrnAC2893	1390	2316	1597	1342	1271	629	1246	1394	1415
1840	Hmu2796	1554	1597	2631	1527	1471	634	1436	1577	1574
1866	Hut0628	1383	1342	1527	2601	1504	695	1450	1576	1548
1902	hla0537	1385	1271	1471	1504	2761	776	1541	1717	1721
896	VNG1381	555	629	634	695	776	1196	784	839	803
1842	HQ3439A	1294	1246	1436	1450	1541	784	2613	1848	1709
2060	Hbo1403	1377	1394	1577	1576	1717	839	1848	2619	1935
2030	HVO_0093	1351	1415	1574	1548	1721	803	1709	1935	2664

354 symbols
consensus       VARPLRFRRAPGRWNADRVRRALYQPLDANLGATMGDPWFAPPDG-YEARRFEMDNGDIA
#oth            214121113234414552245424431344311366711234243134231331421251
NP0698A         M:G::::::SNAD:TRN:::E::LA::EDRF::RLSE::::VG:DR:D:V:L::::::::
rrnAC2893       ----------------------------------:NG::::::E::WA:::L::::::L:
Hmu2796         ::G:I::::SSE::::G::HD::::::::KF:::TA:::YR::::::::::IA:::::L:
Hut0628         ::K::::::SNE::T:::::S::::S:NQAI:::::R:::RQ:E:::D::::D:::::V:
hla0537         ::Q:I:::::::G:SD::::AQ:ER:::D:::::AS:::::::P::::::::D:AD:SF:
VNG1381         ---------------------------------------------:--------------
HQ3439A         M:::::::H::WK::NSK:EEK::RD::Q:::::RRQ:::KS:PA::TGD::::S:::::
Hbo1403         ::::::::Y:::::DEA::::DI:DD::S:::::KET:::K::AD:F::V::::N:::::
HVO_0093        ::::::::Y:::::DES:IG:DIF:::::::::E::A::Y::::::::::::D:::::T:

consensus       LFCWNDDR------------AYWLGNTETPEALWRTDKYGFDEVPDAVSRWAQRELLAQL
#oth            113243461111111111112114111111351121315314222552221341114152
NP0698A         :::FRPG::::::::::::::::::::::::P::::N:ET:S:A::P:::::::::T:RI
rrnAC2893       :::::GQ::::::::::::::::V:::::::T::::E::T::::::EI:E:V::::F:::
Hmu2796         ::::S::D::::::::::::::::::::::KT::::N:CS:E:A:HG:A::GK:::::::
Hut0628         ::T:S::V:::::::::::::::M::::::K:::Q:E::T::::::::AE::E:::::T:
hla0537         ::::T:GDDNSPNGADGGPVG::V::::::SE:::::::::::::YP::::V::::::G:
VNG1381         --------::::::::::::----------------------------------------
HQ3439A         ::A:::TE::::::::::::::::::::::K:::::::H::GA:DN:I::::T:::T:::
Hbo1403         :::::::T:::::::::::::::M::::::::::::::K::S:::HS::::VT:::T:::
HVO_0093        ::A:T::H:::::::::::::::I::::::SS::::::E::::A:FE:::::::::I:E:

consensus       HVEDPWLAEYPHLSWFFLPVFLSKDGRETTREFFRDHAAGFPDADREEALSFYEELLATG
#oth            344411244142332111112311112222141143212111223245324222543442
NP0698A         E:T:::::D:E::T:::::::C:::::::::R::AED::::::::ADAG:::::S::ES:
rrnAC2893       E::::::T::ET:AH:::::::::::::S::T::::::G:::::::ADG:A::DDF::::
Hmu2796         EQ::::::::D::A:::::::F::::::S::A::::::G::::::::A:::::::::S::
Hut0628         :E:A:::::::TI:::::::L::::::H:S::::::::::::EC:::T:::Y:::::EG:
hla0537         :DDE::F:A:::V::::::::C::::A::::A::::::::::::T:::GTG:V::T:RP:
VNG1381         ------------------------------------------------------------
HQ3439A         :::S:::EP::::::::::::::::::::::T::KK::::::::A::NV:E:::AVVR:R
Hbo1403         :E:S:::EP:::::::::::::::::::::::::H:::::::::T:D:::::::GF::::
HVO_0093        FDQS:::KP:S:::::::::::::::::::::::H:::::::::T:K:::E:::SFF:::

consensus       VLDDYRETMAGKLGTSEGLDLTRMSAAMGEFNVAKLLDDAGYDITPEIEVTTGHSIDFRA
#oth            52234123..2....1343124.14.112..31131142..3135..23251..12.121
NP0698A         R:::D:Y:::A:::::A:Y:V:::R:T:S::T::::FV:::L:FD::V:QES::AL::AV
rrnAC2893       E:::::Y:::S:::::::F::S::R:T::::::::::V:::N::R::V:LDS:::V:::V
Hmu2796         L:::H:Y:::S:::::D:V:::::Q:T:::::A::::A:::H:FE::V:LGS::AL::QV
Hut0628         :FP:-:YE::A::::A:R:N::::::T:S::T:::::::::::LA::N::SS:::::::V
hla0537         T:::::::::::::::TS:::V:::::IA::TA:RI:TE:::EV:::::::::::L::::
VNG1381         --------:::::::::T::VP:A::::S::HA:W::GE:::EV:::::::::::L::::
HQ3439A         :::QW::V:::::::::Y::::::T:::::::::Y:::N:::::E:::T:S:::A::Y::
Hbo1403         ::::H::V:::::::::Y::::::T:::::::AG:::V::::::V:::D:::::A::Y::
HVO_0093        :::E:::V:::::::::YF:PI::A::::::D::Y:::::::::::::A:A:::::::::

consensus       -D----DGTLVEVTRPLPPSRRSAGT-PVAAVRDTAATKTR--GQLAAHGGGVVLFVDCS
#oth            135445525.1.....5.224.43331112.1221241.24112.134.11312.2...1
NP0698A         :-::::::R:::::::E::A::THADH:::::EE:GRA:RS::E:::::-PEAA:::::T
rrnAC2893       :-::::ED::::::::R:::::QVD::A:G::KASGDA:::::D:::::-P:A::V::::
Hmu2796         :-:::::DI:::::::Q:TN::KIDS::IH::KASGDA:::::D:I:I:-:NAA::::::
Hut0628         ::GDEQT:R:::::::::::E::::S:A:::IKE:V::::G::::::D:::::T:L::::
hla0537         T:PNTRTAS:::::::Q:V:G:::SD::::::::::E:::S:::::E::::::T:::::T
VNG1381         ::REGEQ:V:::::::V:T:D:A:::::I::::E::::::D:::::SE::::A::V::::
HQ3439A         :ETD:EMA::::::::T:TAK:T:::::I:::::::Q::S::::::KS:::D::::::::
Hbo1403         :SRN:G::::::::::::T:K:::::::::::::::E::SG:::::EE::::::::::::
HVO_0093        :ENTRAG:A:I::::::::N:::VSN:::::I::::Q:::NGE::::E:::::T::::::

consensus       SFPDDDWARIRGERPEVGHRPAVVFRARPSGHVEGYTKGSVPLD----LPFA--
#oth            ..2121.5215312.31213.11.2.3..2.5421.53.311332423236642
NP0698A         ::T:AE:SAVAA:::T:::E:T::::::::::I:::RH:TL:F:LDGA:ST:::
rrnAC2893       :::::::H:VY::Q:D::YS:TI::::::D:SM:::AY::::FP:::::::-::
Hmu2796         :::::::R::L::::D:::E::::::M::D:TT:::V::TLH::VAGE:ELPAR
Hut0628         ::D:GE:S::LDAQ::I:::::::::V::G:NTAA::L::::I:LPAYVDV:::
hla0537         :::A::::AV:EA::::R::::::L::::D::::::R:::::I:LSAAIDWV::
VNG1381         :::::E:R:::::::::R::::::::L::::R:::::::::::S::::::QFD:
HQ3439A         :::::E:Q::IA:K:S:H:Q::::Y:L::::::S::M::D:::I:::::SDIG:
Hbo1403         :::::::FSV:D:K:::H::::::::V::::RF::::::R::::::::I::-::
HVO_0093        ::::::::A:M::K:D:R::::::::L::::A::::S:::::V:::::::WLTE