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[K] (RPB5) COG2012 DNA-directed RNA polymerase, subunit H, RpoH/RPB5
9 genomes BUD0722 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG2668

rrnAC2432

HVO_0346

Hbo1135

Hmu0143

Hut1477

hla0414

NP0108A

HQ3397A

Pairwise sequence scores
Consensus score556 HQ3397A VNG2668 rrnAC2432 Hmu0143 NP0108A Hut1477 HVO_0346 Hbo1135 hla0414
445HQ3397A 567 413 435 393 445 420 400 423 385
471VNG2668 413 560 420 413 426 434 413 400 418
474rrnAC2432 435 420 555 454 434 438 385 409 417
462Hmu0143 393 413 454 557 399 438 412 409 446
486NP0108A 445 426 434 399 561 441 428 425 421
494Hut1477 420 434 438 438 441 556 410 437 440
435HVO_0346 400 413 385 412 428 410 557 427 397
470Hbo1135 423 400 409 409 425 437 427 556 452
475hla0414 385 418 417 446 421 440 397 452 547

75 symbols
consensus       MVDVSQHELVPEHTLLDEEELEDVLAEYDIKRTDLPKIKRTDPALPDDAEVGDVVKIVRD
#oth            ....1..41..1.33113242132.51.213112....123.2.2.12..3.1.12.1.1
HQ3397A         ::::N::T:::::::V::DDI:AI:T::::R:A:::::Q:R::::::N::P:::::::::
VNG2668         ::::::::::::::V::::T:DG:::D:::D::E:::::YK::::::N::I::::E::::
rrnAC2432       :::::::D:::D:SVV::DD::A::T::E::K::::::::::K::::::::::::R::::
Hmu0143         :::::::::::D:SIV::DV:D:::E::N::K::::::::::::T::E::::::I::::N
NP0108A         :::::::NM:::::V::R::V:::::::::::::::::Q:R:A:::::::P:N:::::::
Hut1477         ::::::::::::::I::DG:::E::G::::::::::::::A::::::E::::::I::A::
HVO_0346        :::::::K::::::K::D:AV::::Q::NVEK:N:::::LK:::::E:::P:::I::::N
Hbo1135         :::::::K:::::I::E:::V:EM:D:::V:::N::::::::::A:::::A:::I:::::
hla0414         :::::::::::D:V::EA::VDE::::::V:::N:::::::::::::E:::::::::::N

consensus       SRTTDEAVVYRLVVE
#oth            ....14..2....11
HQ3397A         :::::R::S::::I:
VNG2668         :::::::::::::I:
rrnAC2432       :::::::::::::::
Hmu0143         :::::Q::::::::S
NP0108A         :::::::::::::::
Hut1477         :::::T:::::::::
HVO_0346        :::::K:::::::I:
Hbo1135         :::::K::T::::I:
hla0414         ::::E:::::::::S