9 genomes BUD0756 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG0677 rrnAC0767 HVO_1142 Hbo0415 Hmu0957 Hut0625 hla2202 NP1676A HQ2355A

Pairwise sequence scores
Consensus score	692	hla2202	NP1676A	HQ2355A	VNG0677	HVO_1142	Hmu0957	rrnAC0767	Hut0625	Hbo0415
520	hla2202	1063	456	461	468	480	485	459	468	442
540	NP1676A	456	669	494	461	510	511	509	480	466
569	HQ2355A	461	494	702	463	480	519	490	507	498
529	VNG0677	468	461	463	717	510	537	479	479	495
577	HVO_1142	480	510	480	510	693	584	504	482	540
602	Hmu0957	485	511	519	537	584	700	538	508	525
585	rrnAC0767	459	509	490	479	504	538	712	543	515
571	Hut0625	468	480	507	479	482	508	543	681	543
568	Hbo0415	442	466	498	495	540	525	515	543	690

140 symbols
consensus       -------------------------------------------MTDT----EAEADGITA
#oth            1111111111111111111111111111111111111111111.135333234212112.
hla2202         VGPAIGRRRPYQPQQPRRPIGTLPTDSGLTDRQIRQGSDRIVR:S::TGDEPG:E:::D:
NP1676A         ::::::::::::::::::::::::::::::::::::::::::::S--::::TV:EGD:::
HQ2355A         ::::::::::::::::::::::::::::::::::::::::::::SAH:::::T:::::V:
VNG0677         ::::::::::::::::::::::::::::::::::::::::::::::DPAA:T::::::::
HVO_1142        ::::::::::::::::::::::::::::::::::::::::::::::A::::T::EN:V::
Hmu0957         ::::::::::::::::::::::::::::::::::::::::::::::D::::V::::::::
rrnAC0767       ::::::::::::::::::::::::::::::::::::::::::::::SELPV::S::::::
Hut0625         :::::::::::::::::::::::::::::::::::::::::::::A::::::RT::::::
Hbo0415         :::::::::::::::::::::::::::::::::::::::::::::E:::::::T:N::::

consensus       RYRETDAERVLEFEAN--GRTAAVAQNREGYAMLKVRPTADGDELERYYGFDMALDHAAE
#oth            3.21.14..3.4134321142.11...31........1313.............1.....
hla2202         ::E:::G::R:T:S::::::E:T::::V::::::::::GPT:::::::::::::::::::
NP1676A         Q:::::E::::::::G:::K:::::::ID:::::::::S:::::::::::::::I:::::
HQ2355A         :::::ET:::::::SETG:Q::::::::::::::::::N:N:::::::::::::::::::
VNG0677         Q:Y::::::::A:TVER::T:::I:::V:::::::::SSP::::::::::::::::::::
HVO_1142        ::YV:::::::::DRD:::::::::::ID:::::::::::E:::::::::::::::::::
Hmu0957         ::::::T:::::YDRD:::::::I:::TD:::::::::::::::::::::::::::::::
rrnAC0767       T:::::E::L:I::S::::GS::::::I::::::::::::::::::::::::::::::::
Hut0625         T:E::::::::V::V::::Q:::I::::::::::::::::::::::::::::::::::::
Hbo0415         K:Y::ES::I:T:DNG::RT:::I::::::::::::::::::::::::::::::::::::

consensus       LLGVSPHDLPVPEPAADMGM
#oth            1.214233..1.24.2....
hla2202         ::::AVA::::::A::::::
NP1676A         ::D:A:SE::I:::::::::
HQ2355A         ::R:NV::::I::::S::::
VNG0677         R:::GK::::::AG::::::
HVO_1142        :::A:::::::::D::::::
Hmu0957         ::::G:::::::DA::::::
rrnAC0767       ::::::NV::::D:::::::
Hut0625         ::::D:AQ::I::S:E::::
Hbo0415         :::::::::::::D:E::::