9 genomes BUD0761 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG1384 rrnAC0432 HVO_1535 Hbo0011 Hmu1108 Hut0468 hla2413 NP2692A HQ2677A

Pairwise sequence scores
Consensus score	507	VNG1384	HQ2677A	HVO_1535	Hbo0011	NP2692A	hla2413	Hmu1108	rrnAC0432	Hut0468
224	VNG1384	535	232	190	203	208	218	218	226	188
293	HQ2677A	232	584	279	272	208	250	223	221	229
372	HVO_1535	190	279	522	379	290	259	245	262	254
332	Hbo0011	203	272	379	547	294	232	248	293	232
341	NP2692A	208	208	290	294	559	250	268	273	261
328	hla2413	218	250	259	232	250	468	273	274	260
313	Hmu1108	218	223	245	248	268	273	498	302	287
356	rrnAC0432	226	221	262	293	273	274	302	501	294
343	Hut0468	188	229	254	232	261	260	287	294	486

72 symbols
consensus       -MMAQIVPPTERECERCGRVERWDDDADTWRIAEDDGEKQVGSPHCIHEWDINGAFNPLE
#oth            12345132.42.3.11...513.232365.52246435444.322.1.1...11515.34
VNG1384         :-:TDLRT:S::V:T::::H:H:SE::HH:::-----GDDA:RV::::A:::TAS:-:VG
HQ2677A         ::TSP:DT:D::V::::::I:H:N::TI::NV::Q:ENPAI::VY:::::::::::V:VS
HVO_1535        ::EP:LRR::R:A::::::::::::::A::LV::T::::R::::Y:::::::::R:A:F:
Hbo0011         MSEPKLRT::K:T:::::::::::AAQT:::VV:A:::R:::::Y:::::::::T:A:F:
NP2692A         ::S:E:::::K:T::::::TDV::EA:QN:V::DV:::R:::NK::::::::::QY::I:
hla2413         ::S:T:T::R:::::L:::E::::::::G:::-----:DEP:DVY:::::::::S:T::I
Hmu1108         :-:TKL:::S::T::::::HDV:::ET:S:Q:VV:GEQ:EA:N:F:L:::::::NYS::A
rrnAC0432       :-::E::T:RK:::::::::DE::P:QHS:::VT:S:T::S:D:::L:::::::T::::A
Hut0468         :-:I:::::N:::::::::L:V::::RGV:---TGRDDG:P:::::L::::::::Y::V:

consensus       E-----------
#oth            244442323221
VNG1384         GNDTPATDGSA:
HQ2677A         DVDGDADVDAKA
HVO_1535        :PA:::::::::
Hbo0011         DKNAHA::::::
NP2692A         GKQNTGADA:::
hla2413         ::::::::::::
Hmu1108         ::::::::::::
rrnAC0432       ::::::::::::
Hut0468         ::::::::::::