|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1227 | VNG2296 | hla0663 | rrnAC2554 | NP1404A | HQ1027A | Hbo1537 | HVO_2984 | Hmu2998 | Hut2841 |
927 | VNG2296 | 1186 | 808 | 859 | 874 | 821 | 843 | 872 | 839 | 823 |
976 | hla0663 | 808 | 1206 | 893 | 910 | 851 | 912 | 926 | 837 | 878 |
1009 | rrnAC2554 | 859 | 893 | 1219 | 972 | 895 | 890 | 942 | 914 | 947 |
1075 | NP1404A | 874 | 910 | 972 | 1222 | 981 | 978 | 994 | 947 | 967 |
1039 | HQ1027A | 821 | 851 | 895 | 981 | 1219 | 1023 | 1017 | 882 | 913 |
1062 | Hbo1537 | 843 | 912 | 890 | 978 | 1023 | 1213 | 1078 | 889 | 929 |
1107 | HVO_2984 | 872 | 926 | 942 | 994 | 1017 | 1078 | 1219 | 908 | 944 |
964 | Hmu2998 | 839 | 837 | 914 | 947 | 882 | 889 | 908 | 1277 | 1018 |
1011 | Hut2841 | 823 | 878 | 947 | 967 | 913 | 929 | 944 | 1018 | 1267 |
175 symbols consensus --------MFDEIMEKFEDSPSQQAVIRLLLERGFSVNDDGRVVSGGIEIPNTGIAREAD #oth 122121213123112..12..1..4....1.1......13...........1.21.1.33 VNG2296 ::::::::-----:Q:::G::G:::::::::::::::::G:::::::::::Y:QV:Q::G hla0663 :::::::::::::L::::G::::::::::F::::::::EE:::::::::::Y::::::L: rrnAC2554 ::::::::::::::Q::::::G::D:::::::::::::E::::::::::::::::::::N NP1404A ::::::::::::::R:::::::::::::::::::::::::::::::::::::::::::I: HQ1027A ::::::::::::::Q:::E::::::::::::Q:::::::E::::::::::::::::::I: Hbo1537 ::::::::::::::R:::G:::::E::::::::::::::E::::::::::::::::::I: HVO_2984 ::::::::::::::::::G::::::::::::::::::::Q:::::::::::::::::::E Hmu2998 MSSDTGGAT::T:::::S:::G::Q::::::::::::::::::::::::::::EV:::V: Hut2841 MTADQ:SAS:EA::::::::::::R:::::::::::::::::::::::::::::::::V: consensus VDRRVVDSTTDAILDDDELRRIFQNISSIPSLMDLAPVLDLSVLTVEVADADEPGIVAAV #oth ......11..3...2.32.2...2...21...1......1.312113.53.222.1.121 VNG2296 ::::::::::E:::::G::T:::::::Q:::::::::::::H:V::A:Q::::::::::: hla0663 ::::::::::::::A:P::K:::T::::V::::::::::::T:::I:::A:G:A::::E: rrnAC2554 ::::::NA:::::::::D:::::R::::V:::L::::::::HAV::T:RA:::S:::ST: NP1404A :::::::A:::::::::::::::::::A:::::::::::::T::::R:G:::Q::::::: HQ1027A ::::::::::T::::::::::::::::::::::::::::N::A:I:::NN::Q::L:::I Hbo1537 ::::::::::S:::E:E:::::::::::::::::::::::::::::::::::A:::::EI HVO_2984 ::::::::::::::::E:::::::::::::::::::::::::::::::::::::::::T: Hmu2998 ::::::NA::S:::E:EQ:T:::::::A:::::::::::::T::::A:SN:E:S:::::: Hut2841 :::::::A::::::E:PQ:::::::::A:::::::::::::A:M::A:RE:E:S::::T: consensus TGLLADHDISIRQTISEDPEFTDDPKLYVITDEPLPGDLLNEIRELSFVRRIELA #oth 1441.13212...111.......2.1..21..3432.21322245242.241324 VNG2296 :::::::G:P:::::::::::::E:R:::V:::E:::AVFTALA:M:A::SV::S hla0663 ::I::::G:::::VL:::::::::::::::::TD:S::::V:::D:EY:::VGF- rrnAC2554 :SAI:::G:::::VL::::::::E:::::::::E:::::I::::R:A:::T:::: NP1404A :S::::NGV::::::::::::::E::::IV:::Q:D:E:I::V:A:P:::K:::E HQ1027A ATR:::RN::::::::::::::::::::IV::D:I::E:V::LT:::::Y::S:: Hbo1537 ::R::ER:::::::::::::::::::::LV::Q:V:::::::LSSI::::Q:SI: HVO_2984 :SK:::A:::::::::::::::::::::I:::::I::::::DLSN:G:::::TI: Hmu2998 :DAI:::::T:::V:::::::::::R:::::::AF::E:ITD:KA:P::H::::Q Hut2841 :E::::R::::::V:T:::::::Q:R::::::DAV:::::::::::A::HK:::Q