Home |  Text search
[C] (NuoA) COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A)
9 genomes BUD0775 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0635

rrnAC1447

HVO_0978

Hbo0463

Hmu1950

Hut1396

hla2600

NP2292A

HQ1637A

Pairwise sequence scores
Consensus score1026 VNG0635 hla2600 Hmu1950 HQ1637A Hbo0463 HVO_0978 rrnAC1447 Hut1396 NP2292A
804VNG0635 1032 656 721 708 741 727 695 663 679
787hla2600 656 1160 712 747 748 767 676 700 663
842Hmu1950 721 712 1042 719 755 743 797 772 740
879HQ1637A 708 747 719 1026 903 889 693 682 673
910Hbo0463 741 748 755 903 1029 935 728 690 689
887HVO_0978 727 767 743 889 935 1037 706 705 696
816rrnAC1447 695 676 797 693 728 706 1348 771 773
775Hut1396 663 700 772 682 690 705 771 1018 768
766NP2292A 679 663 740 673 689 696 773 768 1000

181 symbols
consensus       ----------------------------------------MMNPWIAIGALALVGVGIPL
#oth            11111111111111111111111111122222222222222122...1.1111.213..1
VNG0635         ::::::::::::::::::::::::::::::::::::::::-::::::::M::::S:L::A
hla2600         :::::::::::::::::::::::::::MRGRSKPQHVTETY:SD::::::::V::LV:::
Hmu1950         :::::::::::::::::::::::::::::::::::::::::S::::::::::::::L:::
HQ1637A         ::::::::::::::::::::::::::::::::::::::::-:SE:::V:::G::A:::::
Hbo0463         ::::::::::::::::::::::::::::::::::::::::-:SE::::::::::A:::::
HVO_0978        ::::::::::::::::::::::::::::::::::::::::-:SD::::::MG::::::::
rrnAC1447       MQVTFHPRACRFLKTRKAEKPNNEPLYASTSNRETIGDTG:S::::::::::V:ALA:::
Hut1396         :::::::::::::::::::::::::::::::::::::::::S::::::::::V::LV:::
NP2292A         :::::::::::::::::::::::::::::::::::::::::SD::::V::::V::LA:::

consensus       GMMAVSALLRPSVPEQGKSATYESGEIPTGSAR-IQFNIQYYMVALLFVVFDIETVLIFP
#oth            3.221.111..1.1.11.11....1.2...421122..1....1....1...1..1111.
VNG0635         ::LS::S:I::::S::::R:::::A:V:::N:::L:::T:::::::::L:::::::::::
hla2600         A::S:::::::::::T:::T::::::T:::GT:::R:::::::::::::::::::::L::
Hmu1950         S:IS::::::::::::::R::::::::::::SQQ:R::::::::::::::::::::::::
HQ1637A         ::::I::I:::T::::::::::::::::::::::V::::::::I::::L:::V:::::L:
Hbo0463         :::::::I::::::::::::::::::::::T:::V:::::::::::::::::::::::::
HVO_0978        A:::::::::::::::::::::::::V:::T:::V:::::::::::::L:::::::::::
rrnAC1447       T:::::S:::::::::::RT::::::V::::S:Q:K::::::::::::::::::::F:::
Hut1396         S:I:I:::I:::::::S:R:::::::V:::GT::::::::::::::::::::::::::::
NP2292A         S:IVI:S:::::::::::::::::::::::DT::::::::::::::::L:::V::A::::

consensus       WTVIYRDALA-AGAGLTTVLLPMLVFIGILVVGLAWAWRNGAVQWVRSPRATRRKTER--
#oth            .11..22.33131432543.5..14.221.22..2....2.114.321231443443544
VNG0635         ::::::::::MD:I:::N::A::::::::::::::::::K:V:::M:T:AHEQ:T:HE::
hla2600         :A::::P:IS:::VPMIDL:W:::A:V:V:A:::V::::S::IS:A::::::S:::::DL
Hmu1950         ::::::::VG::-L:YEQ::F:::L:L:V::A::::::::::::::K::::::QLSTNNE
HQ1637A         ::::::P::E::::D:::::::::::::::I:::V::::::::K:IK::L:N:Q::::DI
Hbo0463         ::::::S::S:Q::D:A:::::::I:::V::::::::::::::E::K::L:K::::::QD
HVO_0978        ::::::S::E:Q::S:A:I:T:::::::V:::::V::::::::K::K::Q:N::::::QD
rrnAC1447       :::::S::A::E-L:M::A::::V:::T::AI::G:::::::::::::::::KGADTYE:
Hut1396         :::::G::VE::-V::WRA:A::VG::A::A:::G::::::::R::T:K::S:QRV:S::
NP2292A         :AL::S::V::E-F::VR::V:::::LA::II::G::::::::R::::E::EIKTEL-::

consensus       -
#oth            2
VNG0635         :
hla2600         N
Hmu1950         :
HQ1637A         :
Hbo0463         A
HVO_0978        A
rrnAC1447       :
Hut1396         :
NP2292A         :