|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1026 | VNG0635 | hla2600 | Hmu1950 | HQ1637A | Hbo0463 | HVO_0978 | rrnAC1447 | Hut1396 | NP2292A |
804 | VNG0635 | 1032 | 656 | 721 | 708 | 741 | 727 | 695 | 663 | 679 |
787 | hla2600 | 656 | 1160 | 712 | 747 | 748 | 767 | 676 | 700 | 663 |
842 | Hmu1950 | 721 | 712 | 1042 | 719 | 755 | 743 | 797 | 772 | 740 |
879 | HQ1637A | 708 | 747 | 719 | 1026 | 903 | 889 | 693 | 682 | 673 |
910 | Hbo0463 | 741 | 748 | 755 | 903 | 1029 | 935 | 728 | 690 | 689 |
887 | HVO_0978 | 727 | 767 | 743 | 889 | 935 | 1037 | 706 | 705 | 696 |
816 | rrnAC1447 | 695 | 676 | 797 | 693 | 728 | 706 | 1348 | 771 | 773 |
775 | Hut1396 | 663 | 700 | 772 | 682 | 690 | 705 | 771 | 1018 | 768 |
766 | NP2292A | 679 | 663 | 740 | 673 | 689 | 696 | 773 | 768 | 1000 |
181 symbols consensus ----------------------------------------MMNPWIAIGALALVGVGIPL #oth 11111111111111111111111111122222222222222122...1.1111.213..1 VNG0635 ::::::::::::::::::::::::::::::::::::::::-::::::::M::::S:L::A hla2600 :::::::::::::::::::::::::::MRGRSKPQHVTETY:SD::::::::V::LV::: Hmu1950 :::::::::::::::::::::::::::::::::::::::::S::::::::::::::L::: HQ1637A ::::::::::::::::::::::::::::::::::::::::-:SE:::V:::G::A::::: Hbo0463 ::::::::::::::::::::::::::::::::::::::::-:SE::::::::::A::::: HVO_0978 ::::::::::::::::::::::::::::::::::::::::-:SD::::::MG:::::::: rrnAC1447 MQVTFHPRACRFLKTRKAEKPNNEPLYASTSNRETIGDTG:S::::::::::V:ALA::: Hut1396 :::::::::::::::::::::::::::::::::::::::::S::::::::::V::LV::: NP2292A :::::::::::::::::::::::::::::::::::::::::SD::::V::::V::LA::: consensus GMMAVSALLRPSVPEQGKSATYESGEIPTGSAR-IQFNIQYYMVALLFVVFDIETVLIFP #oth 3.221.111..1.1.11.11....1.2...421122..1....1....1...1..1111. VNG0635 ::LS::S:I::::S::::R:::::A:V:::N:::L:::T:::::::::L::::::::::: hla2600 A::S:::::::::::T:::T::::::T:::GT:::R:::::::::::::::::::::L:: Hmu1950 S:IS::::::::::::::R::::::::::::SQQ:R:::::::::::::::::::::::: HQ1637A ::::I::I:::T::::::::::::::::::::::V::::::::I::::L:::V:::::L: Hbo0463 :::::::I::::::::::::::::::::::T:::V::::::::::::::::::::::::: HVO_0978 A:::::::::::::::::::::::::V:::T:::V:::::::::::::L::::::::::: rrnAC1447 T:::::S:::::::::::RT::::::V::::S:Q:K::::::::::::::::::::F::: Hut1396 S:I:I:::I:::::::S:R:::::::V:::GT:::::::::::::::::::::::::::: NP2292A S:IVI:S:::::::::::::::::::::::DT::::::::::::::::L:::V::A:::: consensus WTVIYRDALA-AGAGLTTVLLPMLVFIGILVVGLAWAWRNGAVQWVRSPRATRRKTER-- #oth .11..22.33131432543.5..14.221.22..2....2.114.321231443443544 VNG0635 ::::::::::MD:I:::N::A::::::::::::::::::K:V:::M:T:AHEQ:T:HE:: hla2600 :A::::P:IS:::VPMIDL:W:::A:V:V:A:::V::::S::IS:A::::::S:::::DL Hmu1950 ::::::::VG::-L:YEQ::F:::L:L:V::A::::::::::::::K::::::QLSTNNE HQ1637A ::::::P::E::::D:::::::::::::::I:::V::::::::K:IK::L:N:Q::::DI Hbo0463 ::::::S::S:Q::D:A:::::::I:::V::::::::::::::E::K::L:K::::::QD HVO_0978 ::::::S::E:Q::S:A:I:T:::::::V:::::V::::::::K::K::Q:N::::::QD rrnAC1447 :::::S::A::E-L:M::A::::V:::T::AI::G:::::::::::::::::KGADTYE: Hut1396 :::::G::VE::-V::WRA:A::VG::A::A:::G::::::::R::T:K::S:QRV:S:: NP2292A :AL::S::V::E-F::VR::V:::::LA::II::G::::::::R::::E::EIKTEL-:: consensus - #oth 2 VNG0635 : hla2600 N Hmu1950 : HQ1637A : Hbo0463 A HVO_0978 A rrnAC1447 : Hut1396 : NP2292A :