[C] (NuoJ) COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 9 genomes BUD0777 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG0641 rrnAC1452 HVO_0983 Hbo0458 Hmu1945 Hut1387 hla2595 NP2304A HQ1643A

Pairwise sequence scores
Consensus score	615	NP2304A	Hut1387	rrnAC1452	Hmu1945	hla2595	VNG0641	HQ1643A	HVO_0983	Hbo0458
453	NP2304A	643	388	390	424	374	416	444	433	432
457	Hut1387	388	646	450	429	382	413	420	440	422
453	rrnAC1452	390	450	620	482	363	402	402	423	413
497	Hmu1945	424	429	482	631	417	453	446	462	451
465	hla2595	374	382	363	417	616	404	438	456	460
485	VNG0641	416	413	402	453	404	616	447	480	464
552	HQ1643A	444	420	402	446	438	447	619	544	545
580	HVO_0983	433	440	423	462	456	480	544	613	570
556	Hbo0458	432	422	413	451	460	464	545	570	609

92 symbols
consensus       ---MVYETIAFALFALVTVGCSLGVVLVRDVWHSALLLGGALLSVAVHYVMLQAEFLAAM
#oth            112322121..3...33.21322....21.11.1..2..31.3.11.1.1.11.2.2121
NP2304A         MAVVPL::L::L::::L:::A::::::A::::::::F::A::F:::::::::R:::::VI
Hut1387         ::MG:L:L:::G::::T:::A::::::::::::A::M::I:::::::F:::N::P:V:::
rrnAC1452       ::MALA:S:::::::I::::SAA::::::::::::::::VS:I::::F:::N::A:V:T:
Hmu1945         ::MGL::::::V:::V::IAS:W::::::::::::::::V:::::::::L::R:::V:::
hla2595         ::::::A::::G:::A::LAFG:::::A:::F:A::::::::T:::::::::::::I:::
VNG0641         ::::P:::L::::::AL::AS::::::::::::::::::I::::IG::::::::P::M::
HQ1643A         :::::::::::V:::::::::::::::MQ:::::::::::::::::::::::::::::V:
HVO_0983        ::::::::::::::::::::::::::::::I:::::::::::::::::::::::::::::
Hbo0458         ::::::::::::::::I:::::::::::::I:::::::::::::::::::::::::::::

consensus       QILVYVGGVLILITFAVMLTRK-DPEVSEV--
#oth            .1..........11.....1161344464554
NP2304A         :V:::::::::::::::::V:Q::NTGG:ALT
Hut1387         :V:::::::::::S:::::::RN::DSDG:AQ
rrnAC1452       :::::::::::::::::::::E::ES:I::TP
Hmu1945         ::::::::::::::::::::::::ES:V::GA
hla2595         ::::::::::::V::::::::S::T:TEVNSA
VNG0641         ::::::::::::::::::::K::Q:G:TSS::
HQ1643A         ::::::::::::V::::::::T:Q::G:NI::
HVO_0983        :V:::::::::::::::::::I:N::::ST::
Hbo0458         ::::::::::::V::::::::T:RL:A:ST::