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[K] (RpoZ) COG1758 DNA-directed RNA polymerase, subunit K/omega
9 genomes BUD0779 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1141

rrnAC0068

HVO_2775

Hbo2512

Hmu1264

Hut0173

hla1415

NP2844A

HQ2936A

Pairwise sequence scores
Consensus score434 VNG1141 rrnAC0068 HQ2936A NP2844A Hmu1264 Hut0173 hla1415 HVO_2775 Hbo2512
345VNG1141 447 278 312 322 315 328 357 340 342
313rrnAC0068 278 421 296 284 331 330 289 301 297
359HQ2936A 312 296 487 305 318 330 352 354 357
346NP2844A 322 284 305 424 328 329 334 326 324
368Hmu1264 315 331 318 328 431 355 338 338 332
358Hut0173 328 330 330 329 355 438 363 342 350
389hla1415 357 289 352 334 338 363 437 370 379
404HVO_2775 340 301 354 326 338 342 370 429 396
398Hbo2512 342 297 357 324 332 350 379 396 432

65 symbols
consensus       -------MMQRYNRYEKARILGARALQVSYGAPVLIDTDQTEPILIAAEEYDAGVLPFTV
#oth            1111123545431......11......212.....2111111...1.......11.....
VNG1141         :::::MSDS:HFS:::::::I:::::::A::::::V:::::::::::::::::DA:::::
rrnAC0068       ::::::::NAQES::::::K:::::::LAH::::::E:EH:Q::::::::::::::::::
HQ2936A         MSHSQTHTQPT::::::::::::::::I:::::::V::E:S::::V::::::::::::::
NP2844A         :::::::-:RGT::::::::::::::::::::::::E::::::::V:::::::DA:::::
Hmu1264         :::::::::VQE::::::::I:::::::AF:::::::::::Q::::::::::::::::::
Hut0173         ::::::MPNEQ:::::::::::::::::A::::::::::::Q::::::::::::::::::
hla1415         ::::::MSE::::::::::::::::::::::::::::::::::::V::::::::A:::::
HVO_2775        :::::::::::::::::::::::::::::::::::V:SE:::::::::::::::::::::
Hbo2512         ::::::::Q::::::::::::::::::::::::::L::::S:::::::::::::::::::

consensus       RREDK
#oth            41244
VNG1141         :::GT
rrnAC0068       N:S:-
HQ2936A         KQ::S
NP2844A         H:GE:
Hmu1264         ::G:N
Hut0173         N:GN-
hla1415         :::SN
HVO_2775        K::G:
Hbo2512         Q::G: