|
Pairwise sequence scores | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1165 | NP1572A | hla1767 | Hbo0185 | Hut0947 | hla0856 | NP0984A | Hmu3296 | VNG5064 | VNG5233 | VNG6062 | VNG6464 | rrnB0288 | Hbo3416 | HVO_1363 |
791 | NP1572A | 1147 | 706 | 749 | 708 | 682 | 718 | 733 | 739 | 739 | 739 | 739 | 737 | 681 | 660 |
743 | hla1767 | 706 | 1509 | 771 | 642 | 711 | 711 | 687 | 741 | 741 | 741 | 741 | 755 | 643 | 686 |
823 | Hbo0185 | 749 | 771 | 1170 | 719 | 745 | 709 | 799 | 780 | 780 | 780 | 780 | 821 | 757 | 741 |
867 | Hut0947 | 708 | 642 | 719 | 1133 | 831 | 796 | 813 | 799 | 799 | 799 | 799 | 806 | 692 | 751 |
837 | hla0856 | 682 | 711 | 745 | 831 | 1187 | 936 | 820 | 793 | 793 | 793 | 793 | 840 | 660 | 714 |
871 | NP0984A | 718 | 711 | 709 | 796 | 936 | 1124 | 820 | 839 | 839 | 839 | 839 | 858 | 658 | 687 |
972 | Hmu3296 | 733 | 687 | 799 | 813 | 820 | 820 | 2189 | 936 | 936 | 936 | 936 | 947 | 711 | 690 |
1091 | VNG5064 | 739 | 741 | 780 | 799 | 793 | 839 | 936 | 1162 | 1162 | 1162 | 1162 | 991 | 705 | 707 |
1091 | VNG5233 | 739 | 741 | 780 | 799 | 793 | 839 | 936 | 1162 | 1162 | 1162 | 1162 | 991 | 705 | 707 |
1091 | VNG6062 | 739 | 741 | 780 | 799 | 793 | 839 | 936 | 1162 | 1162 | 1162 | 1162 | 991 | 705 | 707 |
1091 | VNG6464 | 739 | 741 | 780 | 799 | 793 | 839 | 936 | 1162 | 1162 | 1162 | 1162 | 991 | 705 | 707 |
995 | rrnB0288 | 737 | 755 | 821 | 806 | 840 | 858 | 947 | 991 | 991 | 991 | 991 | 1213 | 714 | 718 |
755 | Hbo3416 | 681 | 643 | 757 | 692 | 660 | 658 | 711 | 705 | 705 | 705 | 705 | 714 | 1153 | 801 |
752 | HVO_1363 | 660 | 686 | 741 | 751 | 714 | 687 | 690 | 707 | 707 | 707 | 707 | 718 | 801 | 1149 |
293 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 NP1572A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1767 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0185 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut0947 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0856 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0984A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu3296 VGSEADQREASTDANGSERRERHVGSEADQREASTDANGSERRERHVGSEADQREASTDA VNG5064 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG5233 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG6062 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG6464 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnB0288 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3416 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1363 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111112222222222122221222221221222222 NP1572A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1767 :::::::::::::::::::::::::::::MYLRTRRLRSRLGLADLDRQRRYLRARRRRR Hbo0185 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut0947 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0856 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0984A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu3296 NGSERRERHVGSEADQREASTDANGSERRERHVGSEADQREASTDANGSERRERHVGSEA VNG5064 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG5233 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG6062 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG6464 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnB0288 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3416 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1363 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -------------------MDDRHPLFMPLILVGGLIFGFGLAYSQMARPEVVLNFLQFE #oth 22222222222233334564652113.322143..22..1..15.3..1..1.14..215 NP1572A ::::::::::::::::::MS::::::::::VV::::L:::::G::::::::I::S::ELY hla1767 RTARHGAGGDAMSGVGVIADHES::::L::VF:::AV::V:::V:::::::I::E::::R Hbo0185 :::::::::::::::::VTSENT::::L:V::L::VL:::::GL::::::::::D::::: Hut0947 ::::::::::::MAGANGPN:G:::::::V::::::L::::::A::::K:::::D:::LT hla0856 :::::::::::::::::::-MS::::::::::G:::V:::::GF:H:::::::ID::T:: NP0984A ::::::::::::::::::::A::::::I::V:A:::V:::::GF:H::::::::A::T:D Hmu3296 DQREASTDANGSERRERHVS:::::::E:::F::::::::::GF:::::::::::::::: VNG5064 ::::::::::::::::::::S::::A:::::::::::::::::::::::::::::::::: VNG5233 ::::::::::::::::::::S::::A:::::::::::::::::::::::::::::::::: VNG6062 ::::::::::::::::::::S::::A:::::::::::::::::::::::::::::::::: VNG6464 ::::::::::::::::::::S::::A:::::::::::::::::::::::::::::::::: rrnB0288 ::::::::::::::::MATST::::::I::V:::::::::::G::H:::::::::::::: Hbo3416 :::::::::::::::::VSSEQ:GLT:LAAVYL:::V::::::I:G::::::::D::::N HVO_1363 :::::::::::::::::VSD:E:GLG::LVVIA::::::::::V:N::::::::D::::D consensus DFGLLFVMFGAAAVTGVTFFVAPRLLDRAPLTGDSYQRRLKSFDRNVLVGGAIFGVGWGL #oth .1..2...1.122.2142.434425454..1.14614..2.32.11.22..41..2...1 NP1572A :L::::::G::I::AAPV:LL:S:SGKS:::::AA:T::::RL::::::::VV::I:::: hla1767 ::::V:::G::S::A::::WALS:SGRS:::::KRFG:::::M::D:I:::G:::::::: Hbo0185 ::::::::G::::::A:V:T:GV::HRG:::::RP:E::E:::::::::::TV::::::: Hut0947 :L::::::::::I:S:LA:A:I:::R::::::::T:S::::::::::::::::::::::I hla0856 ::::::::::GSI:A:LA:WTL:K:R:T:::::RP:G:::::::::::I::S:::::::: NP0984A :L::::::::G:::A:L::W:L::::SV:::::MA:G:::::::::::F::::::::::: Hmu3296 ::::::::::::V:S:IA:A:M::IRNV::::::R:E::::P:::::::::::::::::: VNG5064 ::::V:::::G:::::::::::::::G::::::::F::::::::::::I::::::::::: VNG5233 ::::V:::::G:::::::::::::::G::::::::F::::::::::::I::::::::::: VNG6062 ::::V:::::G:::::::::::::::G::::::::F::::::::::::I::::::::::: VNG6464 ::::V:::::G:::::::::::::::G::::::::F::::::::::::I::::::::::: rrnB0288 ::::::::::G:::::IV:::M::V:::::::::PFE:::::::::::I::::::::::: Hbo3416 ::::I:::G:::V::A:V:A::T:YF::::I:ARE:T::V:E:::::V:::::::::::: HVO_1363 :L::V:::G:::V:::TV:AL:EAFG:::::::RD:G:::::::K::V:::VV::A:::I consensus SGICPGAAYASLGIGNIPILWALAGMFLGAYAQGFWRSRSQSR-DASSAGAD- #oth ..1...1....2.1..421.2122...2...4..52.3487452445546531 NP1572A ::::::::::::::::Y:M::GV::::I:::G::AL::MLA:G:::G::IRE: hla1767 ::::::::::::::::AV::YGV::::::::L::YL:EARSD-:AE:P:S::: Hbo0185 :::::::::::::V::V:::::IG:::V:::V::YL:AALSE:DA:APTT::: Hut0947 ::V:::S::::V::::W:::I:I::::I:::L::V::::TN--:--------: hla0856 :::::::::::::V::W:::Y:IV:::I::::::V::::DADD:P:VAPND:: NP0984A :::::::::::::V::W:::Y:VV::::::::::V::::----:----RAP:G Hmu3296 :::::::::::::V::VT::::::::::::::::Y:::QNRA:::-TAT:::: VNG5064 :::::::::::::::::T:::::::::::::T::::::H:::::::::::::: VNG5233 :::::::::::::::::T:::::::::::::T::::::H:::::::::::::: VNG6062 :::::::::::::::::T:::::::::::::T::::::H:::::::::::::: VNG6464 :::::::::::::::::T:::::::::::::T::::::H:::::::::::::: rrnB0288 ::::::::::::::::VT:::::::::::::L::W::::ATDGV:P:PT:::: Hbo3416 :::::::::::F:V::Y:::::I:::::::::::LV:T:IG:T:NTTETTTH: HVO_1363 :::::::::::::V::Y:::I:IG:::V:::L::L::A:RTES:A:TGTS:::