|
Pairwise sequence scores | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 683 | hla0531 | HVO_3003 | Hbo0442 | hla0365 | rrnAC2584 | Hmu1665 | pNG6132 | VNG2379 | NP1084A | Hbo1512 | rrnAC3054 | Hmu2789 | Hut0295 |
233 | hla0531 | 916 | 205 | 158 | 190 | 210 | 215 | 173 | 219 | 197 | 161 | 194 | 181 | 212 |
430 | HVO_3003 | 205 | 696 | 337 | 301 | 381 | 360 | 333 | 285 | 289 | 355 | 332 | 304 | 340 |
492 | Hbo0442 | 158 | 337 | 762 | 430 | 500 | 458 | 475 | 296 | 284 | 299 | 283 | 245 | 279 |
463 | hla0365 | 190 | 301 | 430 | 744 | 476 | 504 | 477 | 280 | 250 | 239 | 228 | 236 | 246 |
556 | rrnAC2584 | 210 | 381 | 500 | 476 | 702 | 557 | 549 | 307 | 289 | 292 | 288 | 264 | 308 |
547 | Hmu1665 | 215 | 360 | 458 | 504 | 557 | 706 | 541 | 312 | 276 | 283 | 285 | 268 | 283 |
502 | pNG6132 | 173 | 333 | 475 | 477 | 549 | 541 | 727 | 317 | 268 | 269 | 208 | 233 | 270 |
341 | VNG2379 | 219 | 285 | 296 | 280 | 307 | 312 | 317 | 659 | 318 | 309 | 242 | 317 | 285 |
333 | NP1084A | 197 | 289 | 284 | 250 | 289 | 276 | 268 | 318 | 659 | 343 | 315 | 322 | 344 |
369 | Hbo1512 | 161 | 355 | 299 | 239 | 292 | 283 | 269 | 309 | 343 | 730 | 349 | 378 | 315 |
380 | rrnAC3054 | 194 | 332 | 283 | 228 | 288 | 285 | 208 | 242 | 315 | 349 | 700 | 338 | 389 |
335 | Hmu2789 | 181 | 304 | 245 | 236 | 264 | 268 | 233 | 317 | 322 | 378 | 338 | 681 | 401 |
369 | Hut0295 | 212 | 340 | 279 | 246 | 308 | 283 | 270 | 285 | 344 | 315 | 389 | 401 | 671 |
126 symbols consensus ---------------------------------T-DDETVRVWLVERTYS-DE-NLIILT #oth 111111111111111111111111122344355575533324...2.4252.434225.2 hla0531 MACSQARANRNRRDRTPSLSAAPAATVLFKRRRHGSPRMTT::::D:QF-::SKG:VR:: HVO_3003 :::::::::::::::::::::::::::::::::MS::D:T:L:::::S:-::DRD::::I Hbo0442 :::::::::::::::::::::::::MNSVSDDS:G::::T::::::::::D::Q:I:::V hla0365 :::::::::::::::::::::::::::MTDAETDA:AKPI:M::::::::D::Q:MV::: rrnAC2584 ::::::::::::::::::::::::::::::::MSATE:::::::::::::D::Q:::::: Hmu1665 ::::::::::::::::::::::::::::::::M:VQA:::::::::::::D::Q:::::: pNG6132 :::::::::::::::::::::::::::::::MSDRA:DE:::::::::::D::Q:::::: VNG2379 :::::::::::::::::::::::::::::::::-:MSD:E:A:::F:E:T::K:G:LS:: NP1084A :::::::::::::::::::::::::::::::::-:MTD:E:L:::::E:G::::S:VE:V Hbo1512 ::::::::::::::::::::::::::::MGDAD:DAE::::C:::::::T::R:D::D:V rrnAC3054 ::::::::::::::::::::::::::::::::M:D:E:::QC:::::SSYG:::RMVT:I Hmu2789 :::::::::::::::::::::::::::::::::-:MT:::QC:::::D:W::K:::VT:V Hut0295 :::::::::::::::::::::::::::::::::-MT:D::QC:::::DFY::::D:VT:I consensus YATPDGERYLRKERSLTSLRDIR-DTTAAVDVDPDNLGPVDDEDLRERYAAEAQRMAEQH #oth ..121.33662222153638573264..13135455124171444331134114112272 hla0531 :::E::::MHT::LAEQR:VTGD:GV::GRE:EENA::E-SPA:EI::F:T::SK::AE: HVO_3003 :::::::YE::::LAAAVMHQR:MTV:::I:APTE::E::::D::::::::::TK::DS: Hbo0442 ::::::SQ::::::::::FD:V::E::::::T:ASH::T:N:PEQ:AQ::EA::::QD:: hla0365 :::T:::::F::::A:::FT:::::::::::A::A:V:A:N:PAD:::::V::K:::AA: rrnAC2584 :::::::Q:F::::A:::FS:V::E::::::A::::::S::::::QAQ:::::T::::K: Hmu1665 :::::::::F::::A:::FG:::::::::::AE:G:::A:::A:::::::T::::::DV: pNG6132 ::::::KQ:Y::::A:::FT:::::::::::AG:G:::T:::P::QDQ::::::::Q:V: VNG2379 :::::::HVH::Q:::NAG----::P::::::AA:D:D::E:PADVD::GT::S::RDE: NP1084A ::::::S:CRV:HL:VQL::KK-::V:::IE:::EK:DA:R::ATQQ:::E:V::VR:N: Hbo1512 ::::::S:VR::QI:A:IM:QRGAEA:::T::STA::D::A:DQT::::R::VE:VRAEY rrnAC3054 ::P:E:D:H:T:QL:PNL::RK-:RI:::T::EV:K:E::T::ET:::::T:::::::R: Hmu2789 ::::::::AQTSQ::T:M::QQ-:PP:::TE:PVED:E::E:S:D:::::R:VE:VR::F Hut0295 ::::::S:AVTQQ::TAL:MKE-:QV:::IEIE::R:E::-::SE:D::VR::E:::::: consensus DPDDEV #oth 212372 hla0531 :L::R: HVO_3003 E::::: Hbo0442 :::EA: hla0365 A::NVI rrnAC2584 ::::AI Hmu1665 ::G:LI pNG6132 ::N:VI VNG2379 ::::T: NP1084A :::ET: Hbo1512 :::::L rrnAC3054 :::A:: Hmu2789 A:::KI Hut0295 E:::P: