| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2247 | NP4732A | hla2467 | NP2866A | Hut0225 | rrnAC0500 | HVO_2399 | VNG6262 | Hmu3367 | Hbo3000 | HVO_A0609 | Hmu2858 |
| 849 | NP4732A | 2313 | 887 | 822 | 750 | 826 | 765 | 779 | 805 | 805 | 710 | 773 |
| 1041 | hla2467 | 887 | 2523 | 1430 | 874 | 912 | 921 | 905 | 893 | 891 | 852 | 964 |
| 1006 | NP2866A | 822 | 1430 | 2670 | 894 | 907 | 868 | 863 | 841 | 860 | 808 | 956 |
| 1867 | Hut0225 | 750 | 874 | 894 | 2606 | 1716 | 1767 | 1742 | 1820 | 1816 | 995 | 1066 |
| 1766 | rrnAC0500 | 826 | 912 | 907 | 1716 | 2295 | 1764 | 1678 | 1676 | 1694 | 1019 | 1087 |
| 1923 | HVO_2399 | 765 | 921 | 868 | 1767 | 1764 | 2338 | 1794 | 1857 | 1868 | 1014 | 1096 |
| 1859 | VNG6262 | 779 | 905 | 863 | 1742 | 1678 | 1794 | 2380 | 1916 | 1915 | 980 | 1100 |
| 1945 | Hmu3367 | 805 | 893 | 841 | 1820 | 1676 | 1857 | 1916 | 2387 | 2049 | 984 | 1058 |
| 1945 | Hbo3000 | 805 | 891 | 860 | 1816 | 1694 | 1868 | 1915 | 2049 | 2377 | 960 | 1077 |
| 1094 | HVO_A0609 | 710 | 852 | 808 | 995 | 1019 | 1014 | 980 | 984 | 960 | 1967 | 1115 |
| 1218 | Hmu2858 | 773 | 964 | 956 | 1066 | 1087 | 1096 | 1100 | 1058 | 1077 | 1115 | 2231 |
395 symbols consensus -------------------------ELVAPLQAGVA---DLAFAPLYW------------ #oth 112111323243444454345465457565455246234675372231422211111112 NP4732A ::::::::::MAVGNIRNREYSTRALSIPV:LVAF:VFIVWL:P::--:::::::::::: hla2467 MSGE::SAADTKNRPRPDRGLRRTA:::GIAITA:VAAVM:G:VL:::AQDLP::::VAS NP2866A MSSETDTATDAPTDTEYSRPFRETV:::GVAA:::LAFCM:::IA:D:LRGAPGALGVAG Hut0225 ::::::MSGAVAGAVLAGWPVVAEPSM:L:::V::DAVGEFV:GL:L:V::::::::::: rrnAC0500 :::::::::::::::::::::::::MTL:FAAG::Y:::-E::L:I--:::::::::::: HVO_2399 :::::::::::::::::::::VIPV::::A::::PL::::A:L:::::L::::::::::: VNG6262 :::::::::::::::::::::::::MTDVIV:PA:I:::EPLLG::::L::::::::::: Hmu3367 ::::::::::::::::::::::MIHLAAL::RV:LL::::PV:E::::I::::::::::: Hbo3000 :::::::::::::::::::::::::MGLS:::T:TP::::SLL:::::I::::::::::: HVO_A0609 :::::::::::::::::::::::::---------:::::RRRHR:H--:::::::::::: Hmu2858 ::::::::::::::::MSASRTATVVVASVFL:::::::Q:QP:A:--:::::::::::: consensus ---LEQWSGLLEWLAAATGLELL--RYPFMHRAILVGLCIGVMAPLIGTFLVHRQLALIG #oth 1212484786475558742355311624324225332211.241.11.11..2.31111. NP4732A :::F:RFW:VM:VIFNDHW:V--::SSS:LQHGFTA:VL::FT::VV:SY::N::M:::: hla2467 EL:YAAFRSFGRGMD::F:TNVF:::H:I:WQSMA::VLV::V:::V:S:::::EM:::: NP2866A EIAF::ILIYGS:IDFYL:TDVF::S::SIL::VAT:TLV:IV:::V::Y:::::M:::: Hut0225 :::::::HWA:::AYHF::I:M:NPD:RY::::::::::::::::::::::::::::::: rrnAC0500 :::::V:YW::AL:YQL:::D:INPE:T::Y::::::::V::I::::::::::::::::: HVO_2399 ::::AL::D::FAVGD::::GF:::D:R:::::::::::::::::::::::::::::::: VNG6262 ::::GV::Q:MTGV:R:::::V:::Q:G:::::::::::::::::::::::::::::::: Hmu3367 ::::AS::EV:S:::GQ::::I:::::G:::::::::::::::::::::::::::::::: Hbo3000 ::::QF:::IMT:::QY::::::::Q:G:::::::::::::::::::::::::::::::: HVO_A0609 :::F------------------:::G::Y:Q::Y:SV:::::VG::V:S:::Y:D:SMV: Hmu2858 :::F:TVDTVACGVG:PL:I:::::C::::Q::LVTAV::::A:::V:S:::::RM:M:: consensus DALAHTAFAGVAVGLFLNAVLGLGVSP-----------YLTAVVVAMIAALLIELISEAT #oth 11....1.1...21211424444643111111111111114.12.2431..23152336. NP4732A E:::::::G:::I:::VG:AVPDLNY::::::::::::LVW:L:::T::::GMQYVAVK: hla2467 ET::::::::::I:ILVTSST:WNG:L:::::::::::L:V:LA:GILG::VVQWLT:R: NP2866A ET::::::::::::VLVV:I::GTQA:IVEAVGSRGTLL:V:LI:SAAG::GLQWL:DH: Hut0225 ::::::::::::::::::::ID::::::::::::::::::::::::::::::::::::V: rrnAC0500 :::::::::::::::::::::E:S::::::::::::::::::::::V::::::::::::: HVO_2399 ::::::::::::::::::G:FS::::::::::::::::::::::::V::::::::::::: VNG6262 ::::::G:::::I:::::::FEF:I::::::::::::::::::I:::V::::::V:::T: Hmu3367 ::::::G:::::::::::::ID:::::::::::::::::::::::::::::::::::::: Hbo3000 ::::::G::::::::::::::D:::::::::::::::::::::I:::::::::::::::: HVO_A0609 :T::::::::::LA:::D:T:::A:P::::::::::::L:G:L:::VV:::VVQALI:Y: Hmu2858 :::::::::::::::LVGS:T::P:::::::::::::::VA:L:::VV:::V::TLTAR: consensus DAYNDVSMAIVLSTGFALGTTLISLNAG--GLAVGINQYLFGNLATVSAENAAILLVLFA #oth 2223.222.11.211..1.232..434211332231331...2123.2543141244135 NP4732A :G:A:IPI::M:TG:::V:IAV::YGV-::VFSATVES::::DILF:PF::VQLMVG:TL hla2467 :::G::PI::M::GS::V::LI::YGD:::LTG:N:QG:::::::V:TP:G:RLMGA:SL NP2866A ST:G::PI::::TGS::V::L:::WSRDFVAI:ID:EDF::::::I:T:TG:RLVAI:SV Hut0225 :::::::::::::::::::::::::::::::::::V::::::::::::PTS::::::::V rrnAC0500 ::::::::::::::::::::V:::::::::::::::::::::::S:::::::V:M:G::S HVO_2399 ::::::::::::::::::::V:::::::::::::::::::::::S::::::::::::::: VNG6262 ::::::::::::::::::::::::I::::::::::V::F:::::S:::TDS::::::::T Hmu3367 ::::::::::::::::::::::::I::::::::::V::F:::::S:::N:S:::::A::G Hbo3000 ::::::::::::::::::::::::I::::::::::VK:F:::::S:::PDS::::::::: HVO_A0609 ::RS:AAL:M::TG:::::SV::::TG::::IS:::::::::S:::::RADVGL:VSMGL Hmu2858 ETSG::::::::AG::::::V:::ATG:::::S:::K:::::S::::TRP:::L:IS:T: consensus VIVGVVALTRNQLLYVTFDETAAAVSGLSVRWYNRILVMLTAMVVVGAMQIMGVILVAAM #oth 3122423122211221.1.13..131214.6421322221..3...2..111.2....11 NP4732A LVGL::G::HK::KFI:::RE::RLARIN:WF:DTL:IV:::L:::A::::L:A::::G: hla2467 IV:AG::::YK:::FI::::Q::R:AQ:N:TG::TL::V:::V:::::::VL:::::::: NP2866A FV:ALTVVHYK:F:FI::::R::R:AR:N:DR::AL::VM::V::::::::L::::::GL Hut0225 :::AT:TV:::::::::::::::::::IP:N:::::T::::::::::::::::::::::: rrnAC0500 ::::T::::::::::::::::::::A::P:A:::::M:::::L::::::::::::::::: HVO_2399 ::::T::::::::::::::::::::::I::T::::VM:::::L::::::::::::::::: VNG6262 I:I:::GV::::::::::::::::::::::N:::::M::::::::::::::::::::::: Hmu3367 I:I::IG:::::::::::::::::::::::S:::::T::::::::::::::::::::::: Hbo3000 ::I:::G:::::::::::::::::::::::S:::::M::::::::::::::::::::::: HVO_A0609 :V::S::VAYRP:V:::::::::RA:R:H::AV:TL:SI:::F:::S::R:::::::::L Hmu2858 LV:A::T:AYRP::A::V:::::RIA::D::RF:QL::V:::V:::A::::L:I:::::: consensus LVVPVAGASQVARSFNESLLVSVVLAELAVILGIAVSYYGGATAGGVIVLVAVGIYVL-A #oth ..1..12.32232..43313521331121132.33412353324.13.123.22413533 NP4732A ::I:::A:M::TG:::RGM:M::GFGQV:::G::LS:::L:IAT:PM:II::IL::IG:: hla2467 ::::::A:::I::::R:TMYLA:IFGQ:S::G:F:::IGF:LPS::S::IT:IA::LASI NP2866A ::I:::A:::::D::R:T:YL::LVGQ:S:LG:L:FAIWQSLPP::S:IVI:I:F:L:AI Hut0225 ::::::::T::S:::S:::I:::::::I::S::::::F:A:V:::::::::::::::C:: rrnAC0500 ::::::::T::S:::S::::::I:::::::L:::GI:::A:::::::::::::::::::S HVO_2399 ::::::::A::S:::S::::::::::::::L:::GA::::E::::::::::::::::V:: VNG6262 :::::::::::::::::::::::::::I::V:::::::::E:::::::::L:::V::::: Hmu3367 ::::::::::::::::::::I:::::::::::::GA::::E::::::::::::A:::V:: Hbo3000 ::::::::A::S::::::::::::::::::::::GA::::K:::::::::T::A::IV:T HVO_A0609 ::I::VT::RIG:::KQ:::YG:LAG:::GLA:VT:A:LY:LA:::S:::::LAGF:-:: Hmu2858 ::::::T:TPR::::VDA:AR:::A:QV::VG:VT:A:L::IAV::T:::L:I:L:A:ET consensus VAAGKLQTAIGE--TPE-G-I-------------- #oth 25414666385554122223136531114434211 NP4732A :LS---------::---:-:-:::::::::::::: hla2467 :GS:FSVK::SAHG---:-:-:::::::::::::: NP2866A LFS:RDSG::SVH:---:-:-:::::::::::::: Hut0225 ::L::V:S:R::QA::HM:S:EADSVDASAGSGDD rrnAC0500 :F:::VRQTGAPDE:R:LDT:SQD::::::::::: HVO_2399 ::I::V:ARA:ADA:::L:S:DSRE:::A:::::: VNG6262 :L:::::::LTGTE:::M:A:SPNS:::DPTTTDD Hmu3367 :VL::::::F::EE:::M:S:DTTE:::SVSRGD: Hbo3000 ILL::::::V::ES:::M:S:DVGQ:::TESAGD: HVO_A0609 ::V:RRL:----::---:-:-:::::::::::::: Hmu2858 :R::QTF::SR-::---:-:-::::::::::::::