|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3520 | Hut2511 | rrnB0197 | NP0104A | Hbo3927 | rrnAC2953 | Hmu2882 | VNG2220 | hla0382 | HVO_2961 | Hbo1573 |
2418 | Hut2511 | 4595 | 2035 | 2099 | 2016 | 2161 | 2168 | 2206 | 2170 | 2150 | 2096 |
2481 | rrnB0197 | 2035 | 3504 | 2025 | 2026 | 2213 | 2170 | 2251 | 2303 | 2255 | 2233 |
2547 | NP0104A | 2099 | 2025 | 3486 | 2042 | 2314 | 2298 | 2338 | 2365 | 2282 | 2307 |
2594 | Hbo3927 | 2016 | 2026 | 2042 | 3507 | 2141 | 2174 | 2256 | 2404 | 2392 | 2403 |
2730 | rrnAC2953 | 2161 | 2213 | 2314 | 2141 | 3490 | 2741 | 2370 | 2407 | 2399 | 2409 |
2784 | Hmu2882 | 2168 | 2170 | 2298 | 2174 | 2741 | 3473 | 2475 | 2451 | 2410 | 2432 |
2824 | VNG2220 | 2206 | 2251 | 2338 | 2256 | 2370 | 2475 | 3538 | 2495 | 2584 | 2539 |
3011 | hla0382 | 2170 | 2303 | 2365 | 2404 | 2407 | 2451 | 2495 | 3542 | 2825 | 2786 |
2998 | HVO_2961 | 2150 | 2255 | 2282 | 2392 | 2399 | 2410 | 2584 | 2825 | 3532 | 3019 |
2964 | Hbo1573 | 2096 | 2233 | 2307 | 2403 | 2409 | 2432 | 2539 | 2786 | 3019 | 3543 |
626 symbols consensus ------------------MVVGDITTG--------------------------------- #oth 111111111111111111111212212111111111111111111111111111111111 Hut2511 MSTAFAVPDLGDGATEGRL:ALEVAA:ETVAEGTLLAEVETDKSIVEVTAPETMAIEACD rrnB0197 :::::::::::::::::::::::V::S::::::::::::::::::::::::::::::::: NP0104A ::::::::::::::::::::::::S::::::::::::::::::::::::::::::::::: Hbo3927 :::::::::::::::::::GAKET::E::::::::::::::::::::::::::::::::: rrnAC2953 :::::::::::::::::::::::V:::::::::::::::::::::::::::::::::::: Hmu2882 :::::::::::::::::::::::V:::::::::::::::::::::::::::::::::::: VNG2220 ::::::::::::::::::::::::S::::::::::::::::::::::::::::::::::: hla0382 ::::::::::::::::::::::::A::::::::::::::::::::::::::::::::::: HVO_2961 ::::::::::::::::::::::::A::::::::::::::::::::::::::::::::::: Hbo1573 ::::::::::::::::::::::::S::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hut2511 AAEGEDVEVGETLFTYEAADPDDPSESGDGEGGEPAEPPEPTEDGPSEPDDDSADAVGGA rrnB0197 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0104A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3927 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2953 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2882 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2220 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0382 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2961 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1573 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -----------------------------------TEVLVIGAGPGGYVAAIRAAQLGLD #oth 11111111111111111111111111111111111.11111.1..........11.322. Hut2511 SQLTGGASERTVRPVGEGTPADVPSPGSVEGVPEQ:D::I::::::::::::::G::::: rrnB0197 ::::::::::::::::::::::::::::::::::::D::::::::::::::::::::A:: NP0104A :::::::::::::::::::::::::::::::::::::L::V:G:::::::::::G::DV: Hbo3927 ::::::::::::::::::::::::::::::::::::D:::::::::::::::::::H::: rrnAC2953 :::::::::::::::::::::::::::::::::::::L::::G::::::::::G:::::: Hmu2882 :::::::::::::::::::::::::::::::::::::L::V:G:::::::::::::::V: VNG2220 ::::::::::::::::::::::::::::::::::::D:A:V:::::::::::::G::::: hla0382 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::K::: HVO_2961 :::::::::::::::::::::::::::::::::::::L::::::::::::::::::N:I: Hbo1573 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::N::: consensus TTLVEKDAYGGTCLNHGCIPSKALITGSDLAHEAGQAEEMGIHADPAVDMAQMVEWKDGV #oth 1....3211..2...3.......3.22252.32133.131.24121311343143..121 Hut2511 V::::D::V::::::Y:::::::::H:A:I:Y::AN::HL:VS:::T::ID:LTG:::D: rrnB0197 V:::::GE:::A:::R:::::::::H::K::S:::::::L::Y:::T:ALDE:IN::::: NP0104A V::::A:::::::::E:::::::::HVAT::D:VES::A::L::RAD:::QGL:D::::: Hbo3927 V:::::E::::V:::::::::::Y:SAT::::D::::A::::LV:::I:::K:Q:::SNS rrnAC2953 :::::R:::::::::::::::::::SA::V::D:R:::S::VF::::::::G:T:::::: Hmu2882 :::::R:::::::::::::::::::S:A:V::R::::::::VY::::::LSG:::::::: VNG2220 V::::::::::::::Y:::::::M::A:GV:::::H:::::VY:::D::V:E::D::::: hla0382 :::::::::::A:::R::::::::::::G::::::N::S:::::::::::GK:::::::: HVO_2961 :::::::::::::::Y:::::::::::AN::::::N::::::::::V:::S:LRD::S:: Hbo1573 :::::::::::::::::::::::F::A:S::::::H::::::::N:::::S:LRN::::: consensus VDQLTGGVEKLCKANGVNLVEGTAEFVDENTVRIAHGGEGQGSETIEFEHAIIATGSRPI #oth 121..311.2.1222..3123.4.3.3246422142223221222251231111....12 Hut2511 :::::::::Q::H:Q::TV:D:V::::NNRRAT:TTD---D:ETA:D:GN::V::::::: rrnB0197 :::::S:I:Q::T:A::::LK:::::A:::K:::I:Q:::::::SLK::NC::::::::: NP0104A :::::S:::::::::::S::::R:::::GE:A:::::::::::::VT:DS:V:::::::: Hbo3927 ISR::DT::::::::::S:I::M:S::::TE:HVTRDEDNRDRVS:G::RC::S:::::V rrnAC2953 :TR::R:::S:::NA:::::::::::::DG:::V::::::::::SLS:::::V::::::M Hmu2882 :TR::R:::S:A:SA::E:I::E:T:TG:H:A::::::D::::::V::::::V::::::: VNG2220 :::::::::::::::::::I::R:::AGSDKL:VV:::D::::::::Y::::VS:::::: hla0382 ::R:::::::::::::::::P:::S::::H:A:V::::Q:::::S::::::::::::::: HVO_2961 ::::::::::::::::::::::::R:K:::A:::::::::::::::::::C:::::::V: Hbo1573 :::::::::::::::::::I::::R:K:DGA:::E::::::::::V::::C::::::::: consensus QIPGFEFDDDHVLSSRDALAADSVPDRLVVVGAGYIGMELSTVFAKLGADVTVVEMLDDI #oth 22.113.4415121.431.43322.241311.1.......1.2231..42.111..1132 Hut2511 E::D:P::SEY::D::::::L:ER::S:::I:::::::::::::E:::T:::::::F::V rrnB0197 E::::G:E:ERIV::DG::NF:T:::E::I::::::::::A::YSR::S::S:I:::EQA NP0104A EL::V:::GE:I:D:S:V:DLR:::ESMT:::G:::::::::ML::::C:::I::::::: Hbo3927 :::::D:T::E:W::::::S:AT:::::::::::::::::::::::::S::::I:::::A rrnAC2953 AV::::::GE:I:::K::::LE:::EK:L::::::::::::::::::::E:::::::::V Hmu2882 :V::::::A:PI:::KE:::LE:L:E::L:::::::::::::::Q:::SE::::::::EA VNG2220 EV:::D:G::P::D::Q:::MAEL:SSM:I::G:::::::::::::::V:::::::::G: hla0382 :::::::AE:::W::A:::D::T:::::GI::G:::::::A:TY:::::::::::::::: HVO_2961 :::::D:G:EP:W::::::E::T::E::::::G:::::::::T::::::::::::::::: Hbo1573 :V:::::A::A:W:::::::::::::D:::::::::::::::T::::::N:::::::::V consensus LPGYEDDIARVVRKRAEELGIDFHFGEGADSWEE-ADDGIVVHTETEDGEES----EYRA #oth .23132.1323..41.222.13141.24.33.4515133341512211136411114261 Hut2511 :S::D:::S:L::E::A:F::::R:::M:A:::::T:::::::::D:::DRH::::SLE: rrnB0197 ::S::E:::SI::::::R::V:::::YT::::AA:S:GKA:LTAVPA:EAAHDSDI:LT: NP0104A ::::TE::T:L::N:::S::VA:S:::R:TG::P::G::VRLD:::::::TA::::S:T: Hbo3927 ::::::::T:::::::S::::::R:::::SE:RG:I:N::E:V:::::::R:::::V:PT rrnAC2953 :::::::::T:::D:::::::::N:::A::N::::T:E::R:Q:VD::EVVT::::::N: Hmu2882 :::F:::::TL::E::::I:V::Y:::A:::::Q::GEE::::::D:::DLT::::RFD: VNG2220 ::Q:G:::::P::Q::::::::::::LA::::TD:T::::::TAAD:::::T:::::FET hla0382 :DP::::VK:I:::::::::VE:::::::SE:S:G::G:YLL:::::E::::::::T:G: HVO_2961 :::::S:V::::::::::::::M:L::::SG:R::E::::M:T::::::::N:::::::: Hbo1573 :::::::V::::::H::S::VK:::::::SG:SP:DGEDV::E:::::::I:::::T::: consensus DKVLVAVGRQPVTDTLDLDNAGLEPDDDGFLETDDRARTDVEHIFAVGDVAGE-PMLAHK #oth 1231.11..3211113422431213333.3241.5451.441412.1...1322.....2 Hut2511 E::F:VG::E:::::AN:QA::I:L:::::VK::AQG::TC:R:::I:::V::::::::: rrnB0197 :RI::::::R::::::SI:D::V:TNAQ::IP::STC::NK::::::::::::::::::: NP0104A EN:::::::EGAA::CNVEAL::::RN::T::::ATTQ:S:DG:Y::::::::::::::: Hbo3927 :::::::::::::E::::EQI::::TEQ::::::RH:::::::V:::::::::::::::T rrnAC2953 E:C::::::E::::::A:::ID:QT:EN:VIP:::QC::AF:SV:::::::::::::::: Hmu2882 E:A:::::::A:::G:G::EL:I:::E::::A::EQ::::A::V:::::::::::::::: VNG2220 E:::::::::::::::N::AV::::N:::R::::HE::::::NV::I::::PG::::::: hla0382 ::I:::::::::::G::V::::I:T::R::I:::::T::A::::H:::::::D::::::V HVO_2961 :::::::::S:::::M:IE:::::A::R:::SV:::R:::::::Y:::::VEDT:::::V Hbo1573 :::::::::S:::::::IE::::::NEN::::::::M:::::::Y:I:::VADS:::::V consensus ASKEGEVAAEVIAGEPAALDYQAIPAAVFTDPEIGTVGMTEAEAEAAGFDPVVGQMPFRA #oth 122..2...222.11.334.5113.11...1..11...11241.244.23.12.411331 Hut2511 ::R:::::::A:::::SV:::::M::V::::::VA::::S:ND:RDD:YY::::R::LAS rrnB0197 G:::::::::::::::::V::::L::::::::::::::L::N::ANK:MT::T:EFQ:Q: NP0104A :YR::H:::::V::::SR:::::::S::::::::::::L:::::::E:::::::E::L:: Hbo3927 :::::I:::D:A::K:STM:NRT:::::::::::::::L:A::::SE::::I::TF:::: rrnAC2953 :MA::::::RAA::::::F:H:::::::::::::A::::::S:::::::E::I::::V:: Hmu2882 :MA::::::::V::::::::H:::::::::E:::::::::::::AD:::::::::::M:: VNG2220 :::::::::::::::::::::::V::::::::::::::L::DD:A:Q:::::::TF::N: hla0382 :::::I::::::::::T:::Q::::::::::::::::::::E::::D:::::::E:::N: HVO_2961 :::::I::::HV::::V:F:S::V::::::::::::::::::D::E:::T:::::::::: Hbo1573 G::::I::::H::D::V:Y:A::V::::::E:::::::::Q::::E:::T::::K:::N: consensus SGRALTTGHTEGFVRIVADEETGFVLGAQIVGPEASELIAELALAIEMGATLEDIASTIH #oth 11..1.32432...121.15231321.1....11.1.11..3122..11.2111213.1. Hut2511 N:::::L:D::::::::::RR:ELI::::::::N:::::::V::::::D:R:S:::E:V: rrnB0197 ::::::ANRA::::::I:TK::ER:I:::::::::::::::I:AM:::::K::::G::V: NP0104A ::::::L:AD:::::::::A:::::::G:::::::A::V::VG::::L::R:::::A:V: Hbo3927 :S::::::E::::::::::G:C:T::::::::A:::::V::V:::::LD::V:EL:::V: rrnAC2953 N:::::VNEK:::::V:::ADEE:L:::::::::::::::::G:G:::::R:::::G::: Hmu2882 N:::::VDEKA::::::::D:::::::::::::::::S:::VG:::::::::::::G::: VNG2220 :::::::::DD:::EV:::::S::L:::::::::::::V:::G:::::::::::V::::: hla0382 ::::M::::::::::L:::D:::::::::::::::::::::A::::::::::::V:A:V: HVO_2961 :::::::N:AD::::V:::::S:::::::::::::::::::::F::::::::::V::::: Hbo1573 ::::::::::D:::::::::DS::I:::::::::::::V:::::::::::::::V:G::: consensus THPTLSEAVMEAAENARGQAIHTLNR #oth .....1..22...32.225.1.1321 Hut2511 :::::::::::::A::::E::::AD- rrnB0197 ::::::::I::::Q:::EK:::RR:- NP0104A :::::::::A:::A:::DS::::::: Hbo3927 :::::A:::::::::::DR::::::: rrnAC2953 :::::::::H:::AA:::E:V::--: Hmu2882 :::::::::H:::LA:::E::::--: VNG2220 ::::::::T:::::H:L:H:V::::: hla0382 :::::A:::::::::::::::::::: HVO_2961 :::::A::::::::::L::::::::: Hbo1573 :::::A::::::::::Q:::::::::