|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2776 | Hut0638 | Hbo3451 | VNG1185 | hla2027 | HVO_2144 | NP1546A | Hut0714 | rrnAC3489 | Hmu2185 |
1533 | Hut0638 | 3083 | 1313 | 1367 | 1361 | 1371 | 1340 | 1276 | 1339 | 1322 |
2238 | Hbo3451 | 1313 | 2991 | 1896 | 1958 | 2059 | 2000 | 1992 | 1938 | 1919 |
2124 | VNG1185 | 1367 | 1896 | 2726 | 1894 | 1862 | 1875 | 1922 | 1804 | 1862 |
2197 | hla2027 | 1361 | 1958 | 1894 | 2826 | 1914 | 1949 | 1913 | 1858 | 1932 |
2273 | HVO_2144 | 1371 | 2059 | 1862 | 1914 | 3064 | 2094 | 1975 | 1899 | 2015 |
2244 | NP1546A | 1340 | 2000 | 1875 | 1949 | 2094 | 2849 | 1882 | 1889 | 1919 |
2245 | Hut0714 | 1276 | 1992 | 1922 | 1913 | 1975 | 1882 | 3162 | 1928 | 1954 |
2135 | rrnAC3489 | 1339 | 1938 | 1804 | 1858 | 1899 | 1889 | 1928 | 2745 | 2103 |
2203 | Hmu2185 | 1322 | 1919 | 1862 | 1932 | 2015 | 1919 | 1954 | 2103 | 2803 |
434 symbols consensus -----------------------------------G----MPRDIDTS------------ #oth 111111122333223323334334442334235442545453473.43111111111111 Hut0638 ::::::::MTEDHPHGDGQSPEAGHPGGHPGSSAP:HDGGS:GTT:SGHPGGHLGTRNYD Hbo3451 :::::::::::::::::MQTIVPNTFGSSLSHTAI:VATMN::A:::::::::::::::: VNG1185 :::::::::::::::::::::::::::::::::::-::::-MTPV::::::::::::::: hla2027 :::::::::::::::::::::::::::::::::::-:::::FDNL::D:::::::::::: HVO_2144 :::::::MSRPPHVDTDADAEANADAGSDAGAPPTATAPPD:SS:::::::::::::::: NP1546A ::::::::::::::::::::::::::::::::MST:APIPS::::::::::::::::::: Hut0714 VFGTVDLDSEAYRVLWIATALVPSLCIDSHGSANR:ERNVR:T:::P::::::::::::: rrnAC3489 :::::::::::::::::::::::::::::::::::-:::::RGKL:LG:::::::::::: Hmu2185 :::::::::::::::::::::::::::::::::::-::::-M:GV:VE:::::::::::: consensus ERPLVLIWEVTQACELACDHCRADAKPARHPDELTTAEGKRLLDDAAEFGDGQ-LVVLSG #oth 21.3112..1....3.2.2....2.415.1.2..111..221133134..22.111.1.. Hut0638 ::::IVT:::::::::E::::::E:Q:E:D:A::SIE::RAFI:SITD::RP:PIL:F:: Hbo3451 Q::F::V::L::::::::K::::::::N:::::::::::QQ:::E::Q:::::::::::: VNG1185 :::V::V:::::::A::::::::S:R:Q:::S::S:::::Q::T:::A:::::::::::: hla2027 R:::::::::::::G:::R:::::::::::::::S:E::::::N:::T:::::::::::: HVO_2144 R::F::::::::::D::::::::::T::::::::::::::::::Q:R:::P::::::::: NP1546A Q::F:::::::::::::::::::::::S::::::::::::::::S::::::::::::::: Hut0714 :::I:::::L::::D:::K::::E:EDR::::::::::::Q::A::T::::E:::::::: rrnAC3489 :Q::::::::::::::::K::::::Q:R::::::S:::::A:::Q:S::::::::::::: Hmu2185 :::::::::L::::G:T:K::::::R:E::::::::::::::::Q::D:::::::::::: consensus GDPLARDDLVELVEYGTDQGLRMTLTPSGTASLTPERIEALADAGLRRMALSLDGATAEA #oth ...14.4.351.1411234112112..11.521.435233.41..2414.1.2.123332 Hut0638 ::::E:P::F::LDHAA:RDVTTAV::AP:DN::EAV:GK:::::VE:I::::::::P:: Hbo3451 ::::::E:AA:::Q::::A:::::::::::::::RDS:DE::::::Q:V:::I::GS::: VNG1185 ::::::P:T:::::H:::C:::::V::::::::::TA::::::::VAQF:V:I::::PTT hla2027 :::::::::L:::S::D:::::::I:::::Q:::AD:::D:::::I:::::::::::R:S HVO_2144 ::::::S:::D:::::::M:::::::::::S:::S:TVA::L:::VK:::::::::::AS NP1546A :::MK::::::::R:::K::::::::::::EA:::DN:A::V::::Q:::::V:AP-:T: Hut0714 ::::Y:::VT::::::::::::::::::::::::S:::::::S:::::::V::::PD::S rrnAC3489 ::::::G::P:::::::E::::::::::::N:I::::LAE:D::::::L:::I::GDSD: Hmu2185 ::::V:::VT:::::::R:::G::::::::E::::::::::Q:::::::::::::GD:DS consensus HDAFRGEAGSFERTLAAAEAAREAGLPLQINTTVCAETVEELPAIRDLVADLGAVLWSVF #oth ..4..2.41..23153..1212331311.2....114..15..22233.2221111.1.. Hut0638 ::E::::E:::A:VEQ::RQ:::::MEI::::::T:N:::Y::E:AAM:EAFD:AM:E:: Hbo3451 :::::K:N:::DQ:V::::::KS::::::V:::::::::D:::K::Q::E:::::::::: VNG1185 ::E::::::::::::R::R:I::L:V:::V::::::D:::A:::::::::E::VA::::: hla2027 ::R::::E-:::S::E:::::S:::::::::::::::::D:::::::R:R:::::::::: HVO_2144 :::::::D:::DQ:V:::R:::::::::::::::::Q::D::::LC:::::::::::::: NP1546A ::R:::::::::::RE::::::D::I:::T::::::T:::T:::V:EF::EV:::::::: Hut0714 ::G::Q::::::Q:I:::RT:::K:::::V:::::G::::D::::::::::::::::::: rrnAC3489 ::T::::S::::A:M:::::::NLDI::::::::::::::Q:::::::::::D::::::: Hmu2185 :::::::S::::A::::::::::TD::::::::::::::DQ:::::E::::::::M:::: consensus FLVPVGRGRVLDPISPERAERVMEWLHEVSEDAPFGVKTTEAPHYRRVALQRRRDG---- #oth ...11...33.3123.3.114.12..641323141121.1...2....441354333333 Hut0638 ::::I:::EE:AQLD:G:TVD:::::YRRGR:::YR:I:V:::::::::DEFE:RE:::: Hbo3451 ::::::::::::::::A:::G:::::SH:ADE:R::::::::::::::VA::GS:STDRP VNG1185 :::::::::A:::V::A:::E::A::DG:ARSEA:::::::::M::::RA::GG:::::: hla2027 :::A:::::I:E::A:::::D::::::G:A:SE::::::::::F::::G::SDG:E:::: HVO_2144 ::::::::::::::::::::::::::T::::::::::::::::::::::I:::::ASDAP NP1546A ::::::::QI::::Q:::::S:L:::QD:::A::::::::::::::::::::NGSATDAP Hut0714 ::::I:::T:::::::::::D::A::A::QR::D::I::::::::::::::::Q::AGGR rrnAC3489 :::::::::::T::D:::::::LK::::::DE:S::L::::::::::::MEQQDE::::: Hmu2185 :::::::::::TQ:::D::::::::::::::SE:::L:::::::::::TIE:E::::EAG consensus -ADGIQRR-------GGITAGDGFAFVSHTGEVYPSGFLPQSAGNVRDRSVVDIYRNSDL #oth 4542531211111114122..4..1...12.331......421.1.22522.23.1224. Hut0638 SSE:VRV-::::::::STR::K::V:::YE:::::::::::RG:::T:::L::::::A:: Hbo3451 S::S:G:::::::::A:::::N:::::::I:K:::::::::::::::EQ::::::::::: VNG1185 :--AP::::::::::A:V:::::::::::::A::::::::S::::::E:::::S::::E: hla2027 :-EATR:::::::::::::::R::::::::::A:::::::E:::::H:::I::::::G:: HVO_2144 PT:::G:::::::::L:::::::::::::::DLF::::::AT::::::GGL:ER::E::: NP1546A D::A:G::::::::::::I:::::::::::::LF::::::K:::::T:SDL:SL:QD:T: Hut0714 PPM:Q::HSSSGDRST:::::N:::::::::::F:::::::::::::ET::::::::G:: rrnAC3489 ::S:LK:::::::::M::R::K:::::::::::F::::::K:::S::EE:::::::D:P: Hmu2185 EN::L::::::::::T::R::Q::::::::::M:::::::E::::::SEG:::L::E:A: consensus FRRLRDPDALKGKCGACEFRHVCGGSRSRAYATTGDPLASDPLCPYVPDGYDGPLP---- #oth .22..132316.1.11.41151........2.4.12.121....4311432215311112 Hut0638 ::::::TEQFV:S:SR:DYLD:::::::::H:V::N:::::::::W:---------:::: Hbo3451 ::S:::::::R::::::::::L::::::::F:Y:Q:::E:::::D::::::E:Q:::::E VNG1185 :Q::::TE::T::::::S::T::::::::::::::E:M:::::::H:::::::::::::: hla2027 :ES::E::R:::::::::::Q:::::::::F:::::::E::::::::::::::E::PTLK HVO_2144 ::S:::R:::G:::::::::::::::::::::H:::::::::::G:::AD::::I::::: NP1546A :ES:::R:R:::::::::::::::::::::::V:::::::::::A:R:S::::::::::: Hut0714 :E::::::E:S:::::::::F:::::::::F::::::M::::::A:::E::::A:::::: rrnAC3489 :QQ:::D:::T::::::RY:T::::::::::::::::::A::::D:R:::FE:SV::::: Hmu2185 :Q::::DS::E::::::PY:G:::::::::::A::::MG:::::SF:::E:::::::::: consensus ----DRDAAAAD-- #oth 22225355623311 Hut0638 ::::E:VDD:T-:: Hbo3451 QTFTA:::ST:::: VNG1185 ::::::Q:T:D::: hla2027 DGFEGSTS:PDAAD HVO_2144 ::::-GTRS:G::: NP1546A ::::::Q:::DR:: Hut0714 :::::GAPET:::: rrnAC3489 ::::--:QHP:::: Hmu2185 ::ATHGERVPT:::