| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4488 | NP2506A | HVO_2008 | Hbo1879 | hla1109 | VNG1957 | Hut2895 | rrnAC3261 | Hmu2440 |
| 3314 | NP2506A | 4452 | 2872 | 2927 | 2886 | 2872 | 2877 | 2979 | 2880 |
| 3472 | HVO_2008 | 2872 | 4447 | 3382 | 3242 | 2999 | 2903 | 3015 | 2933 |
| 3666 | Hbo1879 | 2927 | 3382 | 4456 | 3379 | 3074 | 3087 | 3138 | 3128 |
| 3570 | hla1109 | 2886 | 3242 | 3379 | 4634 | 3020 | 2987 | 3085 | 3038 |
| 3459 | VNG1957 | 2872 | 2999 | 3074 | 3020 | 4476 | 2966 | 3157 | 3070 |
| 3522 | Hut2895 | 2877 | 2903 | 3087 | 2987 | 2966 | 4465 | 3165 | 3166 |
| 3729 | rrnAC3261 | 2979 | 3015 | 3138 | 3085 | 3157 | 3165 | 4603 | 3503 |
| 3590 | Hmu2440 | 2880 | 2933 | 3128 | 3038 | 3070 | 3166 | 3503 | 4540 |
612 symbols consensus MTDYFEIHERDGAARLGELRLADPVTTPALVDDV-----------LADAGSLWAAERDVP #oth ..1...113..3...311...22121..123.231111111111123.1.11.432143. NP2506A ::E:::::G::C:::R:::::DESRR:::A:::I:::::::::::VT::::::H:DQS:: HVO_2008 ::::::V:A::::::I:::::S:S:::::V:::::::::::::::::::::::::::EL: Hbo1879 ::::::::G:::::::::::::::::::::A:E::::::::::::VE:T::::::::::: hla1109 ::::::::::::::::::::::::::::::A:PF:::::::::::::::::::::::T:: VNG1957 ::E::::::::A:::V:::::SE:::::T:T::::::::::::::I:::::R:TQP:ET: Hut2895 ::E:::VID::::::I:D::::ASI:::::I:::::::::::::::V:::D::TED:Q:: rrnAC3261 ::::::V::::S:::V:::::::S::::::::::DTETPGDCRHV::::::R:ST:::A: Hmu2440 ::::::V:::::::::A::::::::::::V:::H:::::::::::::::::::PT::::: consensus DGDDDVLTVLPHRGLPAGTPDEVAEAFAVDYPDVDFPSAAVVSPETAADHGADAYVLAGA #oth 2.2124.......21.3.1323.231.3214.2.32.1...12331.524.2...1.131 NP2506A :::ESA:::::::A::P::DET:::::ET:Q:N:SS:::::::::::N:Y:T:::::::: HVO_2008 ::S::::::::::S::::SA:::R:S:S:A::::::::::::TAD::D:F:::::::SD: Hbo1879 E:A::::::::::SF::::D:K:QSS::::S::::Y::::::TA:::T:A:S:::I:SN: hla1109 :::EAS:::::::AF::::RG::R:S::::H:E::::A::::DS:S:RHV::::::::D: VNG1957 E:::AA::::::::F:S::A:D:QAS::P:::::A:::::::::S::::F:::::::S:: Hut2895 ::S::E::::::::F::::::::QT::DPAV:::EY:::::I:::::::::T:::::::G rrnAC3261 ::::SL::::::::::::::::::::::::::::E:::::::::D::TN::S:::::::: Hmu2440 A::ES:::::::::::G:::E::::::::::::::Y:::::::TA::E:::::::::SE: consensus PGFVGHAEAFVDAIVEAREAIPADTALYLSGVATPRNVATLVYAGVDLVDEDRARVRGTQ #oth 3.3...23..21112321222.2.11.3.1...1.2..12.1......11421.121.31 NP2506A ::Y::::A:::E:V:AV:::::D:A::::::::::A:::::::::::::::K:::A::LE HVO_2008 Q::::::R::R:NVI::K:NL::::::V::::::::::SL:::::::::::KL::A::LE Hbo1879 Q::::::S::R::::A:KD:L:::::::::::::::::::::::::::::AKL:::K:R: hla1109 S:::::G:::R::::S:K:SL::::::M:::::::::::L:A:::::::::TL::TK:A: VNG1957 ::I:::GS::A:::::::A:::D::::S:::::::::::M:::::::::NA:::V::::: Hut2895 A:L:::S::::E::::T::S::P:AG:::P:::S:G:::::A::::::F:T:::V::::: rrnAC3261 ::Y::::S:::::VTTV::::::::::::P::::::::::::::::::::P:::V::::E Hmu2440 A:L::::::::E:VI:T:::M:D::::M::::::::::::::::::::::R:::V::::: consensus GRYLTTDGEYFLEDLDELPCACPACQQPREEFDREDCADHNVNALRAELARVRRRIRDGR #oth .3.1.31412212..1....2.2..232222.114.112..212.3...21..4.112.1 NP2506A :F:::::::A:::::E::::::::::GG::A:T:S::::::AAM:::::S:::T::S::: HVO_2008 :F:::S::::::::::::::::E::RK:AS::T:A:A::::A:::::::::::::V:::: Hbo1879 :M:::SEN::::::::::::T:A:::T:::::TH::::A:::::::::::T::Q:::::: hla1109 :M:C:A:A:H:::::::::::::::AG:::::T:A:::E::::::::::R:::E:::A:: VNG1957 ::::::E:A:D:A:::::::S:::::::AAD:::T::V:::::::E:::::::::::::: Hut2895 :W:::R::::RVD:::::::S::::::AV:D::::::VE::E:V:D:::RT::N:::N:E rrnAC3261 :::::::EA::::::::::::::::::::A::::::::E::::::A:::R:::::::::: Hmu2440 :::::::DA:::::::::::S::::RK:::::::Q::V:::::::E:::::::::::::: consensus LRDYIEGQARHDQWLTAAFRRLDQQYGYLEERTPLIRRAELTAASDDSLRRVEIQRFADR #oth ....1...1.132....22.11.121313.311.34.3322311141222.1..1...2. NP2506A :::::::::::EA:::::::::::::S:I:::::VF::G::L:::::A:::P:::::::: HVO_2008 ::::V::::::::::::L:::F::::SFM:Q:V:V::DS::::::EE:ID:::::::::: Hbo1879 :::::::::::N::::::::EF:::::::::::::::NS:IA:::S::I:::::::::E: hla1109 ::::::::T::E::::::::EF:D:W::V::::::M:D::V:::TAET:D::::R::::: VNG1957 ::::V::::::TA:::::M:E:::::::V:Q:::TF:DSL:LSSTQ:A:H:::::::::: Hut2895 :::::::::::E:::::TM::::DE:D:::G::::L:K::I::ST::T::::::::::E: rrnAC3261 ::::V:::::Q:N::::T::::::G::::::::::::::D:S::::::::::::::::E: Hmu2440 ::::V:::::Q::::::TV:::::::A:::RH::IY::E:I:::TE:TM:::::::::Q: consensus VTSRYRNRF-DAPLVLVPCSARKPYSDSQSHRQFHDAIQYRAHVASMTSPIGVVPQELEL #oth ..3..43.1224..111....2....1....4.132.232.1.31.1........2...1 NP2506A :::::ER:L:E:::::::::::::::E::::E::MR:::::G::V::::::::::N:::T HVO_2008 ::K::::::::N::::L::::K::::E:::::::QE:V:::::MV::::::::::::::: Hbo1879 :::::K:::::N:::::::::T::::E::::S:::::V:F:::L:::::::::::S:::: hla1109 :::::Q:::T:Q:::::::::T:::::::::G:::::::W:G:TV::::::::::::::T VNG1957 ::::::K:LDGH::L:::::::::::::::::::Q::AS:::::::I::::::::::::: Hut2895 ::D::::::::::::::::::T:::::::::G::RE::N::G:::::::::::::::::: rrnAC3261 ::D::IP::D:R:::::::::::::::::::K:Y::::KW::::V::::::::::::::: Hmu2440 ::E:::P::DEQ:::I:::::::::::::::E:Y:R:::F:G:M:::::::::::::::: consensus TYPAQHYDSVVTGRWSEDEIEFVARVLERYLERNDYPRVIAHVPEDGYRDICERVEDD-- #oth ........2....1.213.14..13..23..2221.21211.11232.12.2...14311 NP2506A :::::::::::::::T:T::D:::S::::::::AN:D:H::::TG::::::::::::S:: HVO_2008 :::::::::::::D:::::KS:::E::R::::::::::I:::L:PGA:T::V:::A:::: Hbo1879 ::::::::T::::::::::KQ:::S::TQ::::::::::V:::::H::::::::::QE:: hla1109 ::::::::A::::D::::::G:::E::R::::::::S::V:::::::::E::::::S:PA VNG1957 ::::::::::::::::AE:KD::::::R:::::T::S:::::::PE:::::::::AG::: Hut2895 ::::::::T::::::::T::::::D:::A::AA:::::::::::::-::A:T:::::R:: rrnAC3261 :::::::::::::D:NAT:::::S::::::::GT:::EI:::::GE:::::::::A:S:: Hmu2440 ::::::::::::::::AN::::::D:::G::DGT:::E::V:::GE:::E::::::ER:: consensus LDVSFEYTVEDHPTTDESLGNLAAALAGEDKYRKREREHNTVRAIADYQFGDGAGDALF- #oth 2143111.242...131.122.342.4.23224221.111121.2...21.31..122.1 NP2506A :GI:::::AT:::::G:::SA:SE::S:::A:::ET::AA:::::::::::P:::::V:: HVO_2008 ::LDV:F::SE::::T::I:::MRT:D::P:FTRE:::::V:K:L::::L:PD::::::: Hbo1879 V::P:::::::::::TD:IA::MST:Q::L::S::::Q::::K::::::::::::::::: hla1109 I:::::::CVG:::S:::::E:N:::Q::PA:S:::::::::::L:::LL::::::D::G VNG1957 V::P::F::A::::::::::E:N::::::::IWVQ:::AA:LK:V:::YL:::::::V:: Hut2895 ::RE:::::V:::::::::A::SE:::::Q:::::::Q::VI:::::::::AD::NE::: rrnAC3261 ::RE:T:::T:::::AD:::::::E:E:W:R:P::::::::I::V::::::E::::E::: Hmu2440 ::Q::T:::::::::AD::A:::G::E:YP:::::::Q:::L::V::::::A::::EI:: consensus --GD--IETTGRYPKLRV---------DDDDGEQLAAMVPQYGVLSLTLAGARRWVDSDA #oth 113224343311..2.113122211114334.3...11211..2.21131..13.421.1 NP2506A :::P:G:::G::::S::::::::::::T:A::T::::::::::T:::SM::::A:QE::V HVO_2008 ::S:VAL:M:S:::::Q:W::::::::-N:A:V:::T:::::::::F::E::KV:R:::: Hbo1879 ::A:VDVQM:S:::::Q::::::::::RNG::D:::::::::::::F::::::V:S:::: hla1109 GP:EAD:R::::::::Q:WGDDPDAGREGEP:::::T::::::T::F::::::::AE::: VNG1957 ::A:::::VQ::::::QAL:::::::::A:T:D::::L::E::S::F::::::Q::A::: Hut2895 ::::::FSVES::::::::::::::::R::::::::::::E::::A:::::::Q:::A:V rrnAC3261 ::D:::LS:Q::::Q::A:::::::::::A:::::::LAQ::::::::T:::::::E::V Hmu2440 :::::TLTAE:T::Q::AHGERT:::::GGQ::::::LTQ:::::G::I::::::::::V consensus PTKRVEIDDFVPHGSVLAPGVVDADDDIRVGDEVVIEGPKAFAVGRAEMSGPEMVESTRG #oth 11.1.2.14.1.2.......13..222..1..1.121.12.111...514.2114211.. NP2506A :::T:T::A:::S::::::::L:::GS::P:::::F:::::VG::::AAH:RA:A::::: HVO_2008 :::T::::G::::::::::::::::E:::P:::::V:::::::I:::::G:R:L:::::: Hbo1879 ::::::::N:A:::::::::::::::::::::::IV:::::::::::::F:A::T::::: hla1109 ::::::::P::::::::::::::::::::::::::::::::::I:::::::::::::::: VNG1957 ::::::::G:::Q::::::::I::S::::::::::::::A:::::::R:P::A:ADA::: Hut2895 ::::::::::::::::::::II::::S::::::::F:::S:::::::N:::::::D:S:: rrnAC3261 :::T:::EP:::::::::::IT::S:::::::D:::K:DA::GI:::Q::::::RS:::: Hmu2440 SV:::A::::::::::::::::::A:E::::::::::::S::G::::T:P::A:D:A::: consensus IAVEVRHVEER- #oth 21222..12.31 NP2506A V::D:::C::KQ HVO_2008 :G::I::::::: Hbo1879 V:::::::::K: hla1109 V:S:::::D:T: VNG1957 M::Q:::CV::: Hut2895 ::S:::::::K: rrnAC3261 :::QM:::D::: Hmu2440 ::CQ::::::Q: