| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2546 | NP3354A | VNG1638 | hla1039 | HVO_2519 | Hbo2163 | Hut1995 | rrnAC1629 | Hmu2105 |
| 1140 | NP3354A | 2497 | 648 | 862 | 848 | 790 | 807 | 822 | 836 |
| 1408 | VNG1638 | 648 | 2765 | 1046 | 1011 | 1046 | 734 | 841 | 844 |
| 1580 | hla1039 | 862 | 1046 | 3361 | 1331 | 1266 | 843 | 988 | 936 |
| 1599 | HVO_2519 | 848 | 1011 | 1331 | 2774 | 1500 | 866 | 922 | 963 |
| 1623 | Hbo2163 | 790 | 1046 | 1266 | 1500 | 2622 | 886 | 907 | 1026 |
| 1300 | Hut1995 | 807 | 734 | 843 | 866 | 886 | 3059 | 995 | 1066 |
| 1405 | rrnAC1629 | 822 | 841 | 988 | 922 | 907 | 995 | 2458 | 1411 |
| 1487 | Hmu2105 | 836 | 844 | 936 | 963 | 1026 | 1066 | 1411 | 2465 |
464 symbols consensus ---------MEIPDLVQSALGDEEVVAGVALGGEDALCVTPTRTLVYRGDGLLSDESVEE #oth 111111112234132134411212144415111214332.2111121141...1..4.42 NP3354A ::::::::MDDL:E:LAD:VAGGT:IDIIDI::G:TIA::RSA:H:F:S::::K:::::T VNG1638 ::::::::::DV:S::::S::::D:A:H:S:K:::::F:::::S:L:TD:::::::::S: hla1039 MADGSDIRD:SL:E:LAGTV:::::::E:P:::A:R:A::::::::::::::::::::A: HVO_2519 ::::::::::SQ:EI:::V::E:D::TR:H:::::E:F::::::::::AE::::::::D: Hbo2163 :::::::::-----M::::::::D:::R:::::::E:YA:::::::::SE::::::T::: Hut1995 ::::::::::::::::HEE::G::IRS:::I:D:EVV:A:A::::I::P:::::::R::T rrnAC1629 :::::::::::::::::QE:::::IRG::N::D:::A:F::::::::::E::::::K:AS Hmu2105 ::::::::::::::::RQ:::::::T:::N::D:::V:F::::::::::E::::::G:G: consensus YPHDAERISVSEGRRKAKISLDYGLDGDESFSVPAKRADAVLEPLLEGVLRAAGVTA-DD #oth 13.3212152121...2223141132344223114333231133312.3.5351232132 NP3354A FG::VD::G:KTK:::SS:Q:ES-I:AS:::T::S:I::::V:AT::::::TT::V::A: VNG1638 ::::::A:R::D:::::T::::::::::D:::::SGSL:D::H:I:A:::N::D::E:AG hla1039 :S::V:::A::T::::::LT:G:::N:::TI:::T::::D::H:V:A:::S:T:::D:PG HVO_2519 FS:A::QL::K::::::::::::::::S:T::LS:::L:DA:Q:IV::::S:::::DE:G Hbo2163 :S:N::::T::::::::::T:::::::EQT:GLSV:HL:RA:H:VVQ:::KSN:TL:::N Hut1995 F::EVDQLVL::::::TTFK:T:-V::TR::::::RHSRE::TL::::I:GVD::LD:E: rrnAC1629 ::::F::LT:::::::T:F::I:-TSEKLEL:::GS:::::::R::::K:TVS:GI::P: Hmu2105 :A::F::L:I::::::T:FTMT:-V:DKD::A::G::TS::::R::::N::VK::I:::: consensus ESVVGAFRFSELTLVVTDRRLVKHIGSAVWDEDFEAYRFDDVTGLDFEEGSVATAVVLET #oth .415351......1.11351111.1.232.241113251222.1.4114.2.11422325 NP3354A :ELQTQ:::::::::::::Q:L::V::::::DEY::F:Y:EL::::::K:::::Q:IV:: VNG1638 :T:RRSY::::::::::SN:V:::V:::::GL:::EIV:ET::::ST:D:N:SSQL:::: hla1039 :::IQT:::::::::::SE:::::V:::::::E::EFAYA:I:D::::::T:::::::TH HVO_2519 :RL:Q::::::::F:I::A:V:R::::::::::Y:::::A:::D:E::S:::::T:::TV Hbo2163 :::ERL::::::::::ATG:V:::::::L::::::E:::::::D:Q::G:::::S::MTV Hut1995 :::::::::::::::IAEN:::R:::ET::::::TQ:EYA:L:::::Q::::::EIAISI rrnAC1629 ::L::V:::::::::::::Q:L::::NVT::A:Y::FS:::::::E::::::::::::SF Hmu2105 :G:S:V:::::::::::ES::L::::EYT:AG:::S:HY::::::H:::::::::::::A consensus DGRPERIKAPNEQARLVRETLEDALFAYHGVDSLAELRAAVEPDEDDAE-------DDGG #oth 33.41.2.3.21512422232461123122.41242134434444345443322212425 NP3354A :S:RQ:V:V:::H:GS:QQVVQT:V:E::::S::SG:Q:KLD:ETEPEPVGG:::::EAA VNG1638 TQ:T:::::::DKF:A:::AV:::V::::D:T:A:::A::NS:EQT---::::::::S:: hla1039 G::S::F:::::S::A:::::V::VC::::::::E:F:VT:ADQG::DSGGVAAG::::: HVO_2519 :::Q::F:I::::::::::K:AR::CD::::G::E:F:VQM:QAQAA::GA::::::TER Hbo2163 N::Q::F::::DE::QL:::::S::LG:W::S::D:::E:N::::::E-:::::::PA:D Hut1995 ::::Q:::T:R:D::::E::IKK:V:EFYD:ATM:::QQV:::T:E::PA::::::T:EP rrnAC1629 NE::::::::S:E:PM::KA::E::::::E:::::D:N:K:GA:P:KSA::::::::EA: Hmu2105 :::::::::::D::G:F:K:::GS:::::D::::G::NH:L:V::T:G:TDDEEASPS:S consensus DDLDFGSGIDPLSANPEED---PA-A--------------EAPDAEAAGAAAAQQAGAAG #oth 4534223231.2443454243432323443411111111154232234535663443544 NP3354A :ADEAEATTS:EENGGQD:DDGFVS:D:::::::::::::WS:P:DQDP:RVTPNSDVD: VNG1638 GEVS::::V::IDTSTV--:::--:-::::::::::::::GED::P::::N::::::::: hla1039 STT:::E:P:::::S:VA:AEAE:E:GTEGE:::::::::S::N::SG:ETM:NERLTR: HVO_2519 :NT:::A:P:::::::G:LSDE::N:TLSED:::::::::A::AEPTQQ::RN:ST:S:E Hbo2163 K:VS::D:P:::::::T:LSEE::N:TRAES::::::::::S:P::T:D::GG::S:GQQ Hut1995 :::TL::N::::VSGT:G:QPS::EGDQPNIAEDDQSRIA:NEPEP::NSTTEPEP:P:N rrnAC1629 NG:GLE::::::VS:D::-:::--:-::::::::::::::GGD:S:SESTS:ST::AT:S Hmu2105 :G:GLD::::::-------:::--:-::::::::::::::VGD:ED:DPSDERPA:A:GQ consensus AGSAAGVTEDTEAA-------------------------------GSRQAAEAATGTPAN #oth 563343445565532323311111111111111111111111222445542345434456 NP3354A NDA:::AA------:::::::::::::::::::::::::::::::E:QPT:D:T:A::DA VNG1638 :MER::G:D:::P:::::::::::::::::::::::::::::::::N:N:RG:KR:VQ:T hla1039 G:::SS:A::::T:PNAESVKEPVDGHAVDANDPLSDDPLADDPLSDD:N:DP:S:RAVD HVO_2519 :AA:T:AVAEAK::EAATT:::::::::::::::::::::::QSAAESP:::QSS:NV:G Hbo2163 S::QQS:SQQV:T::::::::::::::::::::::::::::::::SQTVE:::Q:Q::T: Hut1995 TRTP:ADR:PKRSQPGSDA:::::::::::::::::::::::::::DHESR:STAD::V: rrnAC1629 TNEQGPT::APTET:::::::::::::::::::::::::::::::R:SDT:GID::SVES Hmu2105 RQ:::S::SQRD:T::::::::::::::::::::::::::::::::::::SPS:D::T-- consensus ADD--FE-SGF-SAA---------ADAD-------------------------------- #oth 444633342224332322234233424263233322322333332233223233311111 NP3354A :A:V:--:---:---:::::::::----:::::::::::::::::::::::::::::::: VNG1638 T::AE::S:::QT:::::ANVEPAV:P:ELAAELADMTAVVDEFADTIDKQHAVI::::: hla1039 ::PTARSETD:A:D:TGEATGEEI:PT:ATESQDTTAPADHVDHADPVDADAFDGSPFES HVO_2519 :::LG::G:::E:::ESEAGDTAT::::Y::::::::::::::::::::::::::::::: Hbo2163 EA:DG:GG:::Q:::::::::::::::::::::::::::::::::::::::::::::::: Hut1995 EHREAV:TTDEFASTGSAPTETPT::QPTAEQSTADQPTRGSLASNADVATADEV::::: rrnAC1629 DTT::--:---:---:::::::::T:P:I::::::::::::::::::::::::::::::: Hmu2105 ---::--:---:---:::::::::N:::L::::::::::::::::::::::::::::::: consensus -----EALAEQVAELRATVEAQNELLRRQQELIEQLIEELRRGR #oth 111112323422341323112.424155.433222.33211322 NP3354A ::::::::SQ::EA:A:K:DR:T:::EA:::T::::VD:::::: VNG1638 :::::DDF:DTIDQQ::VID::QAV:DE:R:RLDD:-QA:IPDQ hla1039 AGVEG:D::TE:::::H:::Q:S:R:D::SA::::::::::::: HVO_2519 :::::A:::AE:ES::EV::::S:QI:H::::V::::::::::: Hbo2163 ::::::RV::EL:::::::DQ:G:EI:Q:R:::::::::::::: Hut1995 ::::::::R:::S::S:A::R::K::KK:HRA:KH:L:N-:SAE rrnAC1629 :::::AE:EA:::::T:A::::::Q:Q::ERT:K:::K:::Q:: Hmu2105 :::::A:VE::L:T:TE:I:Q:::::AK::QT:K:::K:::Q::