|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2701 | hla2705 | HVO_0811 | Hbo0722 | VNG0327 | NP1194A | Hut0399 | rrnAC1798 | Hmu0868 |
2052 | hla2705 | 2830 | 1940 | 1810 | 1743 | 1730 | 1802 | 1700 | 1794 |
2135 | HVO_0811 | 1940 | 2739 | 2039 | 1827 | 1761 | 1787 | 1831 | 1770 |
2074 | Hbo0722 | 1810 | 2039 | 2707 | 1802 | 1771 | 1799 | 1746 | 1792 |
2010 | VNG0327 | 1743 | 1827 | 1802 | 2701 | 1826 | 1697 | 1775 | 1734 |
2127 | NP1194A | 1730 | 1761 | 1771 | 1826 | 2665 | 1849 | 1939 | 1961 |
2198 | Hut0399 | 1802 | 1787 | 1799 | 1697 | 1849 | 2666 | 2102 | 2175 |
2171 | rrnAC1798 | 1700 | 1831 | 1746 | 1775 | 1939 | 2102 | 2697 | 2295 |
2235 | Hmu0868 | 1794 | 1770 | 1792 | 1734 | 1961 | 2175 | 2295 | 2694 |
382 symbols consensus --------------------MQRAEPQEFDRVLSSMCTEPHPAAREAAERFLATNPGDPG #oth 1111111111111111222321133..3.2........4...2..2..11.1.......2 hla2705 VQARAPGAERVRPSAVTFGR::QP:::S:::::::::::::::::::::::::::::::A HVO_0811 ::::::::::::::::::::::::A:::::::::::::R::::::K:::::F:::::::A Hbo0722 :::::::::::::::::::::::SV::T::::::::::D::::::A:::::::::::::A VNG0327 ::::::::::::::::MTRGEA:RP:::::::::::::T:::::::::QA:::::::::E NP1194A :::::::::::::::::::::::::::::S:::::::::::::::::::::::::::::: Hut0399 :::::::::::::::::::::::::::D:E::::::::::::::::::Q::::::::::: rrnAC1798 :::::::::::::::::::ML::::::D:E::::::::V:::S::::::::::::::::: Hmu0868 :::::::::::::::::::::::::::S:E::::::::::::T::K:::::::::::::: consensus TYETVADLERDAVELLGEITGLPDP---AGYVTSGGTEANVQAVRIARNRADT--DDPNV #oth ..221251.22.234.1322113311112..111......2..1.2...132211321.2 hla2705 :::A::S::ER:I:::ATLAEH:T:TDA:::::::::::::::::S::::H:A::S:V:: HVO_0811 ::QA::A::E::LSY::D:::::A::::H:::::::::::I::I:A:::H:RD::::::: Hbo0722 :::E::E::A::::T::K::::A:::::H::I:::::::::::::A::::SRDRVS:::I VNG0327 ::PA::ER:::::A:::::V::SS::::H::IAA::::::L::::A::::::A:::AV:: NP1194A :::::SK:::E::DM:::VA::::A::::::IA:::::::I::::::::::::::RT::F Hut0399 ::Q::T::::R:::::::::::G:::::T::::::::::::::::::::::E:::T:::: rrnAC1798 ::::I:G:::E:::Y::D::::S:::::::::A:::::::L::I:::::::::::::::: Hmu0868 ::::::::::E:::R::T:A::G::::::::::::::::::::I::::::G::::::::: consensus VAPESAHFSFTKAADVLDVELRTAPTD-DYRADVDAVAEAVDDDTVLVVGVAGTTEYGRV #oth .1.312....4...13.1....32.33312.2232113312.33.13.1....1..1.2. hla2705 :V:::G::::H:::EL:::::::V:V:D:F:TRT:::SA::::A:A:::::::::::::: HVO_0811 :::::I::::Q:::::::::::VV:V:D::::N:A::R:::::H::::A:::::::F::: Hbo0722 ::::::::::N:::::::::::LV:::ETH:::::::RA::::E::::::::::::F::: VNG0327 :::A::::::Q::::::G::::L::::G:H::::A:::DL::G::AV::::::::::::: NP1194A :::A::::::R::::I:G:::::::LE:::::NL:G:::LI:S::A:::::::::::::: Hut0399 :V:D::::::::::EM::::::RI::T:::::::E:M:D:I:::::A:::::::::::H: rrnAC1798 :::VH::::::::::::G:::::::AA::::VNMA:M::L::E:::C::::::S::::Y: Hmu0868 ::::H:::::::::EL:G:::::::AT::::::M::MTHLA:::::A:::::::::::Y: consensus DPIPALADIAHDAGALCHVDAAWGGFVLPFTDHAWHFAHADVDTMTIDPHKMGQAAVPAG #oth ....12123.3421.32.....1...3....122.3.21.312111.....5...31... hla2705 ::::E:TR:::ET::RM:::::::::::::::GE:S:DD:A:::L::::::F:::::::: HVO_0811 ::::E:TAV:::::::M::::::::::::::::E:S::::P::S:::::::Y:::V:::: Hbo0722 ::::E::A:::::::F::::::::::L::::::::N::::P::SL::::::C:::CI::: VNG0327 ::::::::::AGVD:NL::::::::::::::::D:S::D:P:N::A:::::::::P:::: NP1194A ::::::::M:A::::::::::::::::::::E:::D:DD::IH::::::::::::::::: Hut0399 ::::::::L:DE::::M:::::F:::F:::::F::::G::EI:::::::::A:::V:::: rrnAC1798 :::::I::L:ETVD::::::::::::Y::::::D:::G:::I:::::::::V:::::::: Hmu0868 :::::V::L:DAV:::::::::::::Y::::::D:::G::::::L::::::V:::::::: consensus GLLARDPDLLDELAIDTPYLESRSQATLTGTRSGAGVASAVAAMDALWPDGYRDQYERAQ #oth .1.1.24541.2..11.....132.31.1.........1.2.2122..12...4312243 hla2705 ::::::AAA::A::V::::::T::::::::::::::::G:::::E:::::::::AV:::T HVO_0811 :::F::KSVV:S::V:::::::A:::S:::::::::::::A:::RE::::::::A:::Q: Hbo0722 :::F::RNG::S::VE::::::T:::::::::::::::::A::L:E:::::::HE:D:VS VNG0327 :F:::::ET::A:::E::::::DT:P::G:::::::::G:L:SLR::::::::E::::T: NP1194A :::::G:E::::::::::::::T::V::::::::::::::A:V::E::R::::Q:::T:: Hut0399 :F:::SS::::::::::::::::::V::::::::::::::::::E::::E:::R::HASM rrnAC1798 ::::::RT::::::VE::::::TD:L::::::::::::::::::ES:::A:::Q:::TSM Hmu0868 :::::S:::::::::::::::::::V::::::::::::::::::::::R::::ET::::M consensus ANAEWLADELAARGYDVVDPELPLVAADLPDSEFDALRDRGWRVSRTGSGELRVVCMPHV #oth 31.311142145..22112.1..11.1221644344..141.1211.42122.1...... hla2705 :::::::SA::E:::E:::::::::::A::R:::::::EA::K::::SH::::::::::: HVO_0811 :::D::Y:::R:::::A:E::::::::SV::EQ::S:::L:::I:::A:::::I:::::: Hbo0722 DL:S:F:G::RT::F:::::::::::::VSE:T:Q::::HE::I:::D:DL::::::::: VNG0327 G:::Y::A::::::::::::::::::::M::A::Q:::EE:::I:::A:DA::::::::: NP1194A T::H:::A:VES::F:::::V::I::M:::YDLVAD::E::::L:::EAD:A:I:::::: Hut0399 D:::::::A::D:::T::G:::::L:::VSL:LIEQ::::::::TK:::::M:::::::: rrnAC1798 :::D::::Q:S:::H:::G::::::::::SMPMT:E:::::::::K::A::M:::::::: Hmu0868 G::::::EQ:DV::H::IG::::::::::SIPMTTE:::::::::K:::::M:::::::: consensus TRSMLRSFLADLDWLR------ #oth 1.23.32.13.1.332211111 hla2705 ::EA::A:V::::RI:E::::: HVO_0811 S:ES:::::S:::N::SGPARN Hbo0722 ::DT:SA::::::AV::::::: VNG0327 ::E::AA::D:V:A:A:::::: NP1194A :::::EE::T:::R:A:::::: Hut0399 ::::::::V:::::Y-:::::: rrnAC1798 ::::::::V:::::Y-:::::: Hmu0868 ::::::::V:::::Y-::::::