| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2617 | hla1010 | HVO_1224 | Hbo0334 | VNG0973 | NP2174A | Hut1638 | rrnAC2204 | Hmu0406 |
| 1611 | hla1010 | 2781 | 1295 | 1258 | 1336 | 1323 | 1392 | 1447 | 1381 |
| 1749 | HVO_1224 | 1295 | 2674 | 1762 | 1265 | 1357 | 1440 | 1509 | 1499 |
| 1742 | Hbo0334 | 1258 | 1762 | 2670 | 1273 | 1426 | 1365 | 1486 | 1405 |
| 1697 | VNG0973 | 1336 | 1265 | 1273 | 2553 | 1449 | 1474 | 1549 | 1512 |
| 1822 | NP2174A | 1323 | 1357 | 1426 | 1449 | 2591 | 1548 | 1629 | 1559 |
| 1994 | Hut1638 | 1392 | 1440 | 1365 | 1474 | 1548 | 2590 | 1863 | 1826 |
| 2139 | rrnAC2204 | 1447 | 1509 | 1486 | 1549 | 1629 | 1863 | 2720 | 1944 |
| 2037 | Hmu0406 | 1381 | 1499 | 1405 | 1512 | 1559 | 1826 | 1944 | 2662 |
399 symbols consensus -------------------SADGPRAVVVDDSHFMRTVISDILEDGGIDVVAEARDGAEA #oth 1111111111111122234554553221211141..21.112.311113..22.51.231 hla1010 MLILGPLPHMSRTTDRRGGRD:SL:V::::::P:::GL:::L:T:A:VA::G::G::::: HVO_1224 ::::::::::::::MSSTAG:GPT::::::::R::::L:RTL:::ADVE:::::A::R:: Hbo0334 :::::::::::::::::::---------------:::L:RTL::::::::::::S:::A: VNG0973 :::::::::::::::::::---MTE:L::::::::::::::::::::V:::GT:EN::R: NP2174A ::::::::::::::::::M:NN:IA:::::::Q::::::::M:D:A::T:::T:SN:ESG Hut1638 :::::::::::::::::MS:RSS:::::A:::::::S:::::::E:::E::TT::::RA: rrnAC2204 :::::::::::::::::::M:::V::::A:::::::S::::::S::::::::Q::::E:: Hmu0406 ::::::::::::::::::MAGST:::::A:::::::S::::::DE::V::::::KN:R:: consensus VSAVREHRPDVVTMDVEMPEMNGIEAVERIMEECPTPVLMLSAHTDENADVTFEALDKGA #oth 243.5233...1...21..2.2.12.2231.324...1.11..11312.12.1..113.. hla1010 L:V:A:T::::::::::::G:G:L:::::L:D:T:::::::::::A:G:E::::::ER:: HVO_1224 I:V:E:N::::::::I:::::::LD:::A:::::::::::::::AE:D:::::::::R:: Hbo0334 :ET:T::A:::::::I::::::::::::A:::D:::::::::::AEDD:::::::::::: VNG0973 LD::TDVQ:::I:::::::::D::::TAE::R:Q:::I::V::L:T:D::A:L::ME::: NP2174A :E:::T:E:::::::LK::G:D::::TG:::D:::::::V::::A:DG:EL::::M:E:: Hut1638 IT:::::E::::::::::::::::::A::::A:R:::I::::::::::::::::::E::: rrnAC2204 ::::I::::::::::::::V::::::T::::A:S:::::::::::::::::::::::::: Hmu0406 :AL:D::::::::::::::::D::S:::Q:::Q::::::::::::::::::::::::V:: consensus VDFFTKPGGEVSMEMSRLKDELVEKVRSVAAVDVSAT-------RSRPEADSSTEPTTTP #oth 1.113..1.111323234222.1221411.41.232352221115645553465322244 hla1010 ::::S:::::::TGV::ES:R:::A:::::DA:LD:ATRDR::::E:EA:::DQNA:ISR HVO_1224 :::V:::::::TS::P:V:R:::::IQ:A::::L:::RR:::::G:::PKAE:KS:A:AG Hbo0334 :::V:::::::TSS:PSV:R::::::Q:A::::L:::ERTKGNVTTA:SR::Q::TA::Q VNG0973 I:T:A::::TI:T:L:GHSE:::AA:ER::SA:PT:-:::::::----GH:VEM::ASP: NP2174A ::::K::S::::VGIKQQQ:::::::::::GA::::::::::::EAAA:RTT::ATS::T Hut1638 :::::::::::::::::::EQ::DM:L:::E:::TTD:::::::AG:S:PA:AS:::IK: rrnAC2204 ::::::::::::::::::::Q:::M:S:::::::G::GS:::::::GTGS::G:A:::AG Hmu0406 ::::::::::::::::::::Q:L:M:L:::D::::G:S::::::GRT:T:SPNRS::S:: consensus GSSASE-----------------YVDNPTLVIGASTGGPNVVEQVLSELPAEADLRVLVV #oth 5453453433331111112222244342.12..1.....22..32133..33.22.1111 hla1010 V:TT:TPPATTE:::::::::::IDGPL:V::::::::::A::R:M:A::M-::C::VI: HVO_1224 ST::ASETTESL:::::::::::PTEGS::I::::::::::::R::AA:::::G:::::: Hbo0334 TDRSR:REQTTSPVSPESRLKRSFP:VS:::::::::::::::E::G::::D:N::I::: VNG0973 DATT::::::::::::::::::::A:::::L::::::::::::SI:AS::::::F:::I: NP2174A SR::::::::::::::::::::::::K::::::S:::::T::::L:::::LD::::I::: Hut1638 ::----:::::::::::::::::V:E:::::::S:::::T::::I::::::A::::I::: rrnAC2204 ::ATDRRGTGGS::::::SGQTT::A:::::::S:::::KM::::MEN::I:::::::II Hmu0406 EAV:DD::::::::::::::::::DA::::I::S:::::KM::S::::::LA::F::::: consensus QHMPEGFTGRFADRLDARSDYDVREATDGERIGGGEALVAAGGSHLRVSNYRNGRLRVKL #oth ....43..4...5.114113.413..41.31.13.1211.3.12.23133124.1.124. hla1010 :::::A::A:::::::EA:A::::::S::A:::S::::::R::::T:IDS::S::::::: HVO_1224 ::::A:::K:::A:::G:C::E::::E::::::P:QIRI:P:::::L:TGD:A::::LE: Hbo0334 ::::::::R:::::::T::A:N:Q::::::K::A:::R::P:::::V:DRD:R:Q:TL:: VNG0973 ::::DQ::S::::::::A:Q::IT::E::S::::::G:::R:DY:M:::G:S::::::R: NP2174A ::::D:::::::K:::GA:E:S:S:::G::::::::::::Q::Y::E::G:GG:::::T: Hut1638 ::::TD::::::T::NK::E:T::::G::D:::::::::::::R:ME:::::S:::::A: rrnAC2204 ::::::::::::E:INT::::E:Q:::::A::::::G:::::DR:ME:K::::::::T:: Hmu0406 ::::G:::::::Q:I:::::::::::Q::D::S:::::I:::DY::::K::::::::::: consensus TDDEPVNSVRPAVDVTMASAAEVVDDPLVGVILTGMGADGADGIRRIKAAGGRTIAQDEA #oth 22233222.2.12.1.241.124112..2222.....5.122.232244..1512..2.2 hla1010 DE:DS-Q::T::A::::R:::A:::G:::::V:::::::ASE:::AMAD::A:::::S:D HVO_1224 S:::ALHG:K::I:L:::::::A::A::A::L:::::R::VE:MT::ER:::H:V::::: Hbo0334 ::TK::HG:K::I:L:::::V:T::G::A:AL:::::R::V::MG::HE:::H:V::::: VNG0973 DQS:RLH:::::I:::FK::::R:T::::S:V:::::S:::::V:AV:D:::A:L::N:: NP2174A :E:::::N::::::::LQT:::Q::G::TAA::::::::::::VESVS::::SVV::::E Hut1638 :::D:::::::S:::::E:::A:I:::::::::::::T:::A:::A::::::T:L::::: rrnAC2204 :Q:::::::::::::::QT:::TI::::::L::::::E::::::::::Q:::K::::::: Hmu0406 S::P:::::::::::::ET::D:I:::::::::::::N:::A::E::::::::::::::: consensus TSAVFGMPKRAIETGCVDDVLPIDDIADGILDGITRE-- #oth 11111.1.3..2.1.312514253523442333254322 hla1010 :CVIY::::::V:::GIGEIHDL::V:GA:VG:EA--:: HVO_1224 :::I:::::::::A::::T:AADGR:::EA:S:L:T-:: Hbo0334 :::I::::M:::::::IEV:A:AEKV:SS::::L:ED:: VNG0973 ::::::I:E:::::::::::::V:QLTEA:A:S:R:TT: NP2174A ::::::::Q::::::V::::R:RNEL:::V::T:M:::: Hut1638 S:::Y::::::V:::Q::AIC:L:TLS:R:::A:NA:VH rrnAC2204 ::::Y::::::A::::::T::::::::::VI:T::T:VT Hmu0406 ::::Y:::Q::A::::::SI:::EE:PA::VET:K::VT