|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2875 | HVO_1113 | HQ3147A | Hut2001 | rrnAC3284 | Hmu2460 | VNG1933 | hla1357 | HVO_2204 | Hbo1915 |
1970 | HVO_1113 | 2830 | 1780 | 1956 | 1902 | 1914 | 1738 | 1905 | 1904 | 1911 |
2335 | HQ3147A | 1780 | 2866 | 2221 | 2203 | 2193 | 1976 | 2248 | 2235 | 2337 |
2616 | Hut2001 | 1956 | 2221 | 2887 | 2564 | 2500 | 2228 | 2470 | 2398 | 2477 |
2661 | rrnAC3284 | 1902 | 2203 | 2564 | 2911 | 2636 | 2257 | 2484 | 2478 | 2503 |
2590 | Hmu2460 | 1914 | 2193 | 2500 | 2636 | 2907 | 2191 | 2415 | 2448 | 2449 |
2356 | VNG1933 | 1738 | 1976 | 2228 | 2257 | 2191 | 2580 | 2190 | 2224 | 2285 |
2581 | hla1357 | 1905 | 2248 | 2470 | 2484 | 2415 | 2190 | 2877 | 2507 | 2556 |
2616 | HVO_2204 | 1904 | 2235 | 2398 | 2478 | 2448 | 2224 | 2507 | 2910 | 2638 |
2663 | Hbo1915 | 1911 | 2337 | 2477 | 2503 | 2449 | 2285 | 2556 | 2638 | 2889 |
398 symbols consensus MKLAMIGFGQAGGKIVDKFLEYDRRTGSGIVRSAVAVNTAKADLLGLEHIPEENRVLIGQ #oth 111121121111112112222125233332123131112131112..332233311.1.1 HVO_1113 ::::L::I::::::V::ALVD:E:::KT:F:VD:I:::S:R:::R::RTA::SRQ::V:L HQ3147A :::::::::::::::::::V:::Q:H::D:::::::::::E:::M::N:::SSKQI:::: Hut2001 :::::::::::::::::::::::D::::::::::::::::::::::::RV:::::::::: rrnAC3284 :::::::::::::::::::::::KE::::::::::::::::::::::::::::::::::: Hmu2460 :::::::::::::::::::::::E::N:::::::::::::::::::::N:SQ:::::::: VNG1933 --------------------------------------------M::::::::::::::: hla1357 ::::::::::::::V::::::::K::::E:::A:A:::::::::M:::::A:NQ:::::: HVO_2204 ::::::::::::::V::::V::::ERNA::::A:::::S::::::::KN::KDQ:::::: Hbo1915 :::::::::::::::::::V:::Q:H::::::A:::::S:::::M::::::QDQ:::::: consensus SRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIPVHEVDAFLVVSGLGGGTGSGGAPVLA #oth 31.........11..1.111.111.11211122....1.1..111..........1..2. HVO_1113 T::::::::::::::::VIA::VG::LSM::DL::::I::::::A:::::::::::::I: HQ3147A LS:::::::::PD::R:::::N:::I:N:LNDV::::I::::I:A::::::::::::::: Hut2001 A::::::::::::::::::::::::I:::::N:::::I::::IIA::::::::::S:::: rrnAC3284 A::::::::::::::::::::::::::::::N::::::::::I:A::::::::::S::V: Hmu2460 A::::::::::::::::::::::::I:::::::::::I:G:::::::::::::::S::I: VNG1933 :::::::::::::::::::::::::::::::::::::::::::I:::::::::::S::I: hla1357 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2204 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1915 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus KHLKRIYTEPVYGLGVLPGSDEGGIYTLNAARSFQTFVREVDNLLVFDNDAWRKTGESVQ #oth 22..2.1......1.1..121.......................2.......111...21 HVO_1113 RE::H::::::::::I::AR::::::::::::::::::::::::I:::::::::::::LE HQ3147A NR::Q:H:::::::::::::E:::::::::::::::::::::::::::::::Q::::::: Hut2001 :::::::::::::::I::::::::::::::::::::::::::::::::::::::::::ME rrnAC3284 ::::::::::::::::::::::::::::::::::::::::::::M::::::::Q:::::E Hmu2460 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::E VNG1933 :::::::::::::I::::::::::::::::::::::::::::::::::::::::S::::: hla1357 :::::::::::::::I::::::::::::::::::::::::::::M::::::::::::::: HVO_2204 :::::::::::::::I:::::::::::::::::::::::::::::::::::::::::::: Hbo1915 :::::::::::::::::::G::::::::::::::::::::::::M::::::::::::::: consensus GGYDEINEEIVRRFGVLFGAGEVEDGGEVAESVVDSSEIINTLAGGGVSTVGYASEEVE- #oth 1..321.21113.1.1..1...234233.......1.......31.....1...214114 HVO_1113 A::GSL:A:LA::L::::S:::GDGS:A:::::::A:::::::GS:::::I:::AV:LDR HQ3147A :::E::::A:AT:::::::::::G:DS::::::::::::::::SS:::::::::::S::: Hut2001 A::A:::D:::K:::I::::::::H:::::::::::::::::::::::::::::A:::DL rrnAC3284 ::::H:::::::::::::::::I:A:DN:::::::::::::::D::::::::::::D::: Hmu2460 ::::H:::::::::::::::::IG::DN:::::::::::::::S::::::::::::D::M VNG1933 :::::::::::T:::I::::::::Q::D::::::::::::::::::::::I:::::T:D: hla1357 :::E:::::::::::I::::::IQQ:Q::::::::::::::::S::::::::::E::::: HVO_2204 :::::::::::N:::::::::::Q::Q:::::::::::::::::::::::::::::G::P Hbo1915 :::::::::::T::::::::::::Q:::::::::::::::::::::::::::::::T::: consensus -KSSGG---GLLSRLTGDDE-DDDLDTANTTNRITSLVRKAALGRLTLPCEIEGAERALL #oth 643421111.....2322253325412131...1.....1.........1.12.2..1.1 HVO_1113 P:R---:::::::::S:GK-:AEAD:GGDS:::::::::R::::::::::::S::::G:V HQ3147A :NP:S::::::::::::QST:A::::::S::::V:::::::::::::::A:L::T::::: Hut2001 DD::--::::::::FR:::S:A:SMES:::::::::::::::::::::::::D:S::::: rrnAC3284 VS:G::::::::::FK:::SS::SM::::::::::::::::::::::::::::::::::: Hmu2460 SS::::::::::::FSSGSDDSN:M:::::::::::::::::::::::::::D::::::: VNG1933 :NN:::AGS:::::F::::-::ELE:::S:::::::::::::::::::::::::S::::: hla1357 :ERTS::::::::::RN::G:E:Q::S:H::::::::::::::::::::::::::::::: HVO_2204 R:NN:::::::::::::G::P::N::::H::::::::::::::::::::::::::::::: Hbo1915 E:::S:::::::::I::G:::::QI:::H:::::::::::::::::::::::::T::::: consensus VLAGPPEHLNRKGIERGRKWLEEQTGSMEVRGGDYPI-NSGKVASVILLSGVHNVPRIKE #oth .31..152.1.1....1.1.2.21.11..1......442244..321..1..3211.11. HVO_1113 :V:::SDV:S:R::::A:T:::DE::T::I::::::::D:NF::A:V:::::YD:::V:: HQ3147A :V::::QY::::::::::::V:G::D::::::::::LMD:::::::::::::YKID::N: Hut2001 ::S:::G:::::::::::::::::::::::::::::VSD::Y:::::::::::::::::: rrnAC3284 :M::::::::::::::::::::::::::::::::::T::AP:::AS:::A:::::::::: Hmu2460 :M:::SA:::::::::::::::::::::::::::::T::EPR::AAV::::::::::::: VNG1933 :T::::KY::::::::::::::D:::::::::::::VS::DQ::::V:::::ND:::::: hla1357 :::::::Y::::::::::::::::::::::::::::YRGA:F::T::::A::T::::::: HVO_2204 ::::::::::::::::::::I::::::::::::::::PGAE:::G:::::::T::::::: Hbo1915 ::::::::::::::::::::I::::::::::::::::R::::::::::::::T::::::: consensus LQQVAIEAQDNIDEIRDESEDNLEELVEDDEDELEPLF #oth ..21.1.11212231132.241.25.12112.1111.. HVO_1113 ::A::::T:RDMLAK:ES:AAS:DD::STGD:RI:::: HQ3147A :::I:N::KE:::S::::::E::N:::N:::::::S:: Hut2001 :::::::::::::D::::::E:::A:::::::::D::: rrnAC3284 :::::::::::::D::NQ::::::D:::::::::D::: Hmu2460 :::::::::::::D::Q::::::DQ:::::D:::D::: VNG1933 ::E:::::::::::::E::::::::::::::::::::: hla1357 :::::::::::L::::::::E::D:::S::S::::S:: HVO_2204 ::::::::::::E:::Q::DS:::T:IN:::::::S:: Hbo1915 :::::::::E:::::QQ:::Q:::N::N:::::::S::