| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3935 | HVO_1541 | Hbo1707 | Hbo3505 | Hut2173 | VNG1967 | Hmu1346 | rrnAC0550 | hla2212 | HQ1733A |
| 3344 | HVO_1541 | 3924 | 3421 | 3239 | 3029 | 3026 | 3133 | 3114 | 3136 | 3094 |
| 3377 | Hbo1707 | 3421 | 3943 | 3626 | 3086 | 3007 | 3104 | 3167 | 3098 | 3069 |
| 3203 | Hbo3505 | 3239 | 3626 | 3795 | 2932 | 2866 | 2975 | 2999 | 2949 | 2912 |
| 3485 | Hut2173 | 3029 | 3086 | 2932 | 3931 | 3158 | 3277 | 3368 | 3258 | 3253 |
| 3390 | VNG1967 | 3026 | 3007 | 2866 | 3158 | 3898 | 3327 | 3191 | 3231 | 3242 |
| 3528 | Hmu1346 | 3133 | 3104 | 2975 | 3277 | 3327 | 3912 | 3387 | 3397 | 3355 |
| 3608 | rrnAC0550 | 3114 | 3167 | 2999 | 3368 | 3191 | 3387 | 3921 | 3443 | 3451 |
| 3539 | hla2212 | 3136 | 3098 | 2949 | 3258 | 3231 | 3397 | 3443 | 4543 | 3447 |
| 3522 | HQ1733A | 3094 | 3069 | 2912 | 3253 | 3242 | 3355 | 3451 | 3447 | 3907 |
590 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 HVO_1541 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1707 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3505 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2173 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG1967 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1346 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0550 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2212 MVVHYVHEWRGSSREDISRRRRHRLSSRDTEGGSAGCGADAASRSTVRGTNRVPSRRSPF HQ1733A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ----------------MADTYVGAIDQGTTGTRFMVFDHSGQVVANAYEKHEQIYPEPGW #oth 11111111111111124633111211111111111...23.4.1112.11...2..2... HVO_1541 :::::::::::::::MSGE::::::::::::::::::::D:K:::::::::::::::::: Hbo1707 :::::::::::::::MTE:::::::::::::::::::::D:R::::::Q::::::::::: Hbo3505 ::::::::::::::::------------------:::::::K:::S::Q::::::::::: Hut2173 :::::::::::::::::T::::::::::::::::::::RD:::AG::::::::F:::::: VNG1967 :::::::::::::::::T:A::::::::::::::I:::QH:D::::T::::::H:::::: Hmu1346 :::::::::::::::::P:::::::::::::::::::::::N::::S::Q::::::K::: rrnAC0550 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2212 GQRRRRERTSATGGIQYMTQ:::::::::::::::::::G:::::::::Q::::::N::: HQ1733A :::::::::::::::::::::::S::::::::::::::::::::::::::::::::N::: consensus VEHDPIEIWENTKAVVTAGLADAGLDAEQLEAIGITNQRETTIVWDKETGRPVHNALVWQ #oth ...116...2..13.2241.33.112.3112.1.1.......21..321.2112..1... HVO_1541 ::::AN:::D:::Q:ID:A:SS::::::::::::::::::::L:::R:::Q:I:::I::: Hbo1707 :::::E::::::Q::MLTA:EE::::::::D:::::::::::LI::::S::::Y::I::: Hbo3505 :::A:A::::::Q::MLTA:EE::::::::::::::::::::LI:::AS::AIA::I::: Hut2173 :::::L:::A:::::::::::::::E:::VA:L:::::::::L::::D::K::::::::: VNG1967 :::::L:::::::S::::::SA:::::DD:A:::::::::::V:::AAS:::I::::::: Hmu1346 :::::T::::::::::::::DA:D:::T::::::::::::::::::R:::::I::::::: rrnAC0550 :::::V::::::QE:::K::::::VG::::::L:::::::::::::::::K::::::::: hla2212 ::::::::::::QQ::LD:::::::E:N::D:::::::::::::::R::::::::::::: HQ1733A :::::::::::::E:::R::EE::::::::::L:V:::::::::::EAS:K::::::::: consensus DRRTTDRVEELQEEGKVEWIREKTGLEPDAYFSATKTEWILDNAEPLKLQSSRGDDLRDR #oth .....1.1.211221.3131.2.....2........1..1..111.1.1323.351211. HVO_1541 :::::::I:T:EA:::TDDV:A::::::::::::::A::L:::SD:I:::R::PE:I::: Hbo1707 :::::::::T::D:::E::V::::::::::::::::A::L::::D:I::ARM:P::V:E: Hbo3505 :::::::::T::D:::E::V::::::::::::::::A::L::::D:I::ARM:P::V:E: Hut2173 ::::::::::::D:D::::::G:::::::::::::::::::::::::::::H:AS::H:: VNG1967 :::::S:::S:E:N::I:R::::::::A:::::::::::L::E::::::S:A:ASS:::: Hmu1346 :::::::::::E:A::I:M::::::::A:::::::::::::::::::::E:A:TR:::E: rrnAC0550 ::::::::::I:::D::::::G:::::C::::::::::::::::::::M:::::A:::E: hla2212 :::::::::::::AD:::D::::::::A::::::::::::::::::::M:::::G::::: HQ1733A ::::::::::I::A::::M::::::::C::::::::::::::::::::M:A:::G:V::: consensus AEDGELLMGTIDSWLIYNLTGNHITDVTNASRTMLYNIHDMEWDDELLEEFDVPREMLPE #oth .23...31....2.1111...2.1...1.......1113213..22..2..31.3211.. HVO_1541 :A::::AF::::T::::::::::::::::::::::F::::::::::::D::N::::L::: Hbo1707 ::E:::MF::::T:VT:K:::A:V:::::::::::F:::::D::::::::::::KA:::: Hbo3505 ::Q:::MF::::::VT:K:::A:V:::::::::::F:::::D:::::::::N::A:L::: Hut2173 ::S:::::::::A::::::::::::::::::::::::V:E:A::GD::A::G::EA:::: VNG1967 :R:::::::::::::::::::E:::::S::::::::::T:L::::W::::::I::::::: Hmu1346 :R::::::::::::::::::::::::::::::::::D:EGLS::A:::::::I:ES:::: rrnAC0550 ::::::::::::A::::K:::::::::S:::::::::::::::::::::::G::ES:V:: hla2212 :RE:::V:::::::::::::::::::::::::::::::R:L:::::::::::::K::V:: HQ1733A ::::::::::::::::Q:::::::::::::::::::::REL::::::::::R:::S:V:: consensus VRPSSDEDLYGHTDADGFLGAEVPVAGALGDQQAALFGQTCFDAGDAKNTYGTGSFYLMN #oth ......143..1..2....2111..11........1......12..........1.1... HVO_1541 ::::::D:Y::T::::::::::::::::::::::::::::::::::::::::::::M::: Hbo1707 :::::::::::T::S::::E::I:::::::::::::::::::::::::::::::::M::: Hbo3505 :::::::::::T::P:::::::I:::::::::::::::::::::::::::::::::M::: Hut2173 :::::::N::::::P:::::::I:::::::::::::::::::EE:::::::::::::::: VNG1967 :::::::AV:::::P::::::A:::TA::::::::::::::::::::::::::::::::: Hmu1346 :::::::AT::T::P::::::::::::::::::::::::::::::::::::::::::::: rrnAC0550 :::::::S:::::::::::KE::::::::::::::::::::::K::::::::::A::::: hla2212 ::::::::Y:::::::::::E::::::::::::::::::::::E:::::::::::::::: HQ1733A ::::::DEY:::::::::::::I::::::::::::M:::::::E:::::::::::::::: consensus TGDEAVMSDHGLLTTIGFQRSGEPVQYALEGSIFITGAAIEWLEDVDLINNAAQTAELAR #oth ..41..4.11.....11..2.....1........21.....1...12..21..1112..1 HVO_1541 ::::::::E::::::V:::::::::::::::::::::::::::::MT::D:::ESEK::: Hbo1707 ::::::::E::::::V::::::::::::::::::::::::::::::S::DD::E:E:::: Hbo3505 ::::::::E::::::V::::::::::::::::::::::::::::::S::DD::E:E:::: Hut2173 ::T:::E:::::::::A::::::::R::::::::A:::::::::::::::::::::D::S VNG1967 ::ED::S:E::::::::::L::::::::::::::V::::::::::::::::::::::::S Hmu1346 ::E:::E::::::::::::M:::::::::::::::::::::::::::::K:::::::::: rrnAC0550 ::S:::A::N:::::V:::M:::::::::::::::A:::::::::::::::::::::::: hla2212 ::N:::K::::::::::::M:::::::::::::::::::::::::::::::::::::::: HQ1733A ::TD::A::::::::::::M::::::::::::::V::::::F:::::::::::::::::S consensus SVDSTDGVYMVPAFTGLGAPHWDGRARGTIVGMTRGTRKEHIVRATLESIAYQTRDVAEA #oth 1.11.....2.............1.....11......211.1......1.11....2.1. HVO_1541 ::E::::::F:::::::::::::Q::::::::::::::R::::::::::::F:::::::: Hbo1707 :::::::::F:::::::::::::Q::::::L:::::::R::V:::::::::F:::::::: Hbo3505 :::::::::F:::::::::::::Q::::::L:::::::R::V:::::::::F:::::::: Hut2173 A::::::::L::::::::::::::::::::::::::::::::::::::A::::::::::: VNG1967 :::T:::::::::::::::::::::::::L:::::::::A::::::::::::::::I:A: Hmu1346 ::E:::::::::::::::::::::::::::::::::::::::::::::::::::::I::: rrnAC0550 ::E:::::::::::::::::::::::::::::::::::::::::::::::::::::L::: hla2212 :::::::::::::::::::::::::::::::::::::G:::::::::::::::::::::: HQ1733A :::::::::::::::::::::::::::::L:::::::E::::::::::::G::::::::: consensus MEADSGIETTTLRVDGGAVKNNFLCQLQSDIIQTDIARPEVDETTALGSAYAAGLAVGYW #oth ..2..112211..........1......11123.112..3........1........... HVO_1541 ::S::E:DLSS::::::::::::::::::N:LD:E:V::Q::::::::A::::::::::: Hbo1707 ::E::::DLS:::::::::::::::::::N:VG:::V::M::::::::A::::::::::: Hbo3505 ::E::::DLS:::::::::::::::::::N:VG:::V::M::::::::A::::::::::: Hut2173 :::::::::::::::::::::D::::::A:V:R::::::::::::::::::::::::::: VNG1967 ::::::VS:::::::::::::::::::::::::::L::::::::::::A::::::::::: Hmu1346 ::::::V:::::::::::::::::::::::::::E:S::::::::::::::::::::::: rrnAC0550 ::E:::V:M::::::::::::::::::::::::::::::Q:::::::::::::::::::: hla2212 ::::::V:::S:::::::::::::::::::::::E::::::::::::::::::::::::: HQ1733A ::::::::::S::::::::::::::::::::L::::V::V:::::::::::::::::::: consensus DTLDELRDNWQVDREFSPEMDAENADKMYGRWDDAVDRSLDWAREE---- #oth 332.1..2..11.12.412444441253.3..21..1.112..3122211 HVO_1541 E::::::E::::::::A:K-:PQ:VEHR::::KE:::::::::::::::: Hbo1707 SN:::::N::::::::::DD::::V:GR::::KE:::::::::::::::: Hbo3505 SN:::::::::I::::::DDS:::V:GR::::KE:::::R:::::GSD:: Hut2173 AD:::::E::R:::::T::IPV:D::R::S::::::E:AR:::::::::: VNG1967 :S::D::E::R:::S:E::::PSE::SK::::E:::::::A::T:D:::: Hmu1346 ::I:::::::::::N:Q:::AP:Q::::::::::::E::R:::H:::::: rrnAC0550 ::V::::::::::E::::::::GK:::::A:::::::::R:::Q:::::: hla2212 ::V::::::::I::::T::KGQAEV::L:S::::::E:::N::QDDEEDE HQ1733A ::V:::::::::::::ES:::SAD:NT::D::::::E::::::Q::::::