| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3556 | Hut2169 | hla2209 | HVO_1540 | Hbo0005 | HVO_A0271 | VNG1972 | HQ1736A | rrnAC0556 | Hmu1342 |
| 2457 | Hut2169 | 3605 | 2157 | 2232 | 2327 | 2212 | 2259 | 2289 | 2384 | 2313 |
| 2705 | hla2209 | 2157 | 3935 | 2506 | 2505 | 2564 | 2338 | 2364 | 2430 | 2403 |
| 2784 | HVO_1540 | 2232 | 2506 | 3450 | 2860 | 2526 | 2404 | 2513 | 2583 | 2496 |
| 2855 | Hbo0005 | 2327 | 2505 | 2860 | 3408 | 2508 | 2407 | 2535 | 2586 | 2548 |
| 2759 | HVO_A0271 | 2212 | 2564 | 2526 | 2508 | 3740 | 2479 | 2442 | 2612 | 2562 |
| 2979 | VNG1972 | 2259 | 2338 | 2404 | 2407 | 2479 | 3670 | 2844 | 2900 | 2886 |
| 3074 | HQ1736A | 2289 | 2364 | 2513 | 2535 | 2442 | 2844 | 3607 | 2972 | 2962 |
| 3145 | rrnAC0556 | 2384 | 2430 | 2583 | 2586 | 2612 | 2900 | 2972 | 3632 | 2989 |
| 3098 | Hmu1342 | 2313 | 2403 | 2496 | 2548 | 2562 | 2886 | 2962 | 2989 | 3638 |
526 symbols consensus ---------------------------MSD-AETP-GEPEFEPDE------PNDGEE--- #oth 111111111111111111222223322323334233655453235111111333334222 Hut2169 :::::::::::::::::::::::::MSDTQRGD:ATDRT:TDA:V::::::ES:E:G::: hla2209 MTRHTDDEDGGAEEGNGTNGTNGAGDRDNPE:PS:::V::AGR::QPSIFV:D:::PKET HVO_1540 :::::::::::::::::::::::::::::::::S:::N:TLT::A::::::QT:D--::: Hbo0005 :::::::::::::::::::::::::::::::::N::--:NVT:::::::::QT:---::: HVO_A0271 ::::::::::::::::::MTASDDRDRTTESNR:NSHDQTI:R:R::::::TTS:GKQRR VNG1972 :::::::::::::::::::::::MSDSE::STT:T:A:NR:::AT::::::::V::K::: HQ1736A :::::::::::::::::::::::::::::::::S:NTDY::::TS::::::::T:S:::: rrnAC0556 ::::::::::::::::::::::::::::::::::::P:T::D:VA::::::::T:::::: Hmu1342 ::::::::::::::::::::::::::::::S:D:::T:ES:::T:::::::::T:::::: consensus --------------------------FEPVDVFPDSTDMDLRPGADSCYKCSTCDTSCPV #oth 222222122222222122222221112122321233322...211.2.2.123..22... Hut2169 ::::::::::::::::::::::::::Y::R:::DST:E::::A:::N:T:VG:::AE::: hla2209 AATDGGVESATGGSDSTELNPDA:::YD::::::G-G:L:::E::::::::TS::::::: HVO_1540 ::::::::::::::::::::::::::::A:E:::::::::::::::N::::TA::V:::: Hbo0005 ::::::::::::::::::::::::::::::Q::D:E:E::::::::N::::TS::::::: HVO_A0271 TDGERRVTDGGVAAASASESAEYDTGS:LT:::EE-G:L:::A:::D::::TA::::::: VNG1972 :::::::::::::::::::::::::::D::ALHD:TD:F::::ES:::::::::::N::: HQ1736A :::::::::::::::::::::::::::::::I::::::F:::::::::::::M::::::: rrnAC0556 ::::::::::::::::::::::::::::::::::::D:F:::::::::F:::::::N::: Hmu1342 ::::::::::::::::::::::::::::::Q::::EET::::::::::T:::::::N::: consensus AEVDDDFPGPKFQGPEQWRLKRKDDAD---IDDSIMSCSNCMRCDDACPSGVPLSQMHNT #oth ...111....1.........12331532221.1.112....11..21...1.11.1...1 Hut2169 :::N::::::Q:::::::::SQ:GEVE::::::::TE::::LQ::SG::::::F:E:::: hla2209 ::::EE:::::::::::::::::E:H::::::E::T::::::::::::::S::::::::E HVO_1540 :::::E:::::::::::::::::E:EA:::V::::::::::::::::::::::::::::: Hbo0005 :::N:::::::::::::::::::::::::::::::::::::::::N::::S::::::::: HVO_A0271 ::::EE::::::::::::::::::::::::::::V::::::::::S::::S::::::::E VNG1972 :::::::::::::::::::::EQS:DEDHE:::::TE::::::::S::::::S::::::: HQ1736A ::::::::::::::::::::::S::EHE:::::::::::::::::::::::::::::::: rrnAC0556 :::::::::::::::::::::QS::DHE::::::V:D::::::::N:::::::::::::: Hmu1342 :::::E:::::::::::::::QT::G:EFA::::::D::::::::::::::::::::::E consensus ARGEYVDEQMDKLSREYIRNRILANYRTSARIASKVPRLANAAMNFGPARWVMEKTLGVT #oth ..121.3311321.4112.....1..213.631.33..211231222412232..21112 Hut2169 ::AK::L:D-QP::IKK:::::::::::::WL:::L::T::FF::N:AV::L::::MKIP hla2209 :::QF:ES::E::::::V:::::S::HFF:S::::::::::::TKIPG:MKLG::V::IA HVO_1540 ::::::::::::::::::::::::::G:L:QLG:MF::::::V:GNSVVQRIN::V::I: Hbo0005 :::::::::::::::::::::::S::::M:E:G::::::T:FL:GNSLVQKIN::V::I: HVO_A0271 ::::::S:::ST:::::V::::::::::::AV::A::::::F:::::::::A:::L:::: VNG1972 :::::::D::S:R:LK:W::::::::::::::::TL:::::::::::::::::::::::: HQ1736A ::::::EK::::::I::::::::::::::::::::M::I:T:V::::::::::::::::: rrnAC0556 ::::::S:::::::V:::::::::::::::FF:::::::::F:::::::::::::::::: Hmu1342 ::::::::::S:::T::W::::::::::::WL::::::I::V:::::::::::::::::: consensus SEREFPEFATQTFREWWAARGGAAVS-E-A--AR--RG-P--QDADKKVAYFHGCYSNYN #oth 31.1..2..31..11..421..454121213321421132115221.11.......111. Hut2169 ::::::::::::::::::E:::E:T:K:R:RE::AE::GAHV:SDE:RI::::::::::: hla2209 GD::::D::::::::::K:::::Q:-:-:-::--::--:-:::NP::R:::::::::::: HVO_1540 A::D:::::::::::::NE:::PQ:-:-:-::--::--:-::RSDE:R:::::::::::: Hbo0005 :::::::::Q::::::::E::::K:-:-:-::--::--:-::SSDE::I::::::::::: HVO_A0271 A::D:::::S:::::::RE::::R:-:-:-::--::--:-::ENPE:R::::::::A::: VNG1972 ::::::A:::E::::::Q::::::A:K:R:QAR:RE::E:::V:::::::::::::A::: HQ1736A K:::::A:::::::Q:::::::VT::R:N:RE::ER::E:::V:::::::::::::A:F: rrnAC0556 :::D:::::K::::::::D:::QVQ:R:N:KA::KR::L:::E::::::::::::::::: Hmu1342 ::::::A:::E::S:::::Q::::G:R:R:RD::ER::E:::L::::::::::::::E:: consensus TPEVAKAMVRVYEHFGYEIVVPEQRCSGTPMFANGMLDDARRHAETNVSSMADLIEEGYD #oth .11.12.1...1.31...241.3.2..........112..2.1.3211232441241.11 Hut2169 :TQ::::::::::SL::::T::K:K::::::::::RV:::::::KV::EHLGNA::D::: hla2209 ::::G:::::::::::::VM::P:K::::::::::::K::::::::::ENLVEA:G::A: HVO_1540 ::::G::::::F:S::::V:::K:::::::::::::::::K:A:GI::DNF:G::P:::: Hbo0005 :::::::L:::::E:::::A::R:::::::::::::::::G:A:K::::EFN::L::::: HVO_A0271 :::::::::::F:Q::::VL::P:G:::::::::::::::::::::::EHL:AALAD:A: VNG1972 ::::GQ::::::::::::::::K:G:::::::::::::::::::DIT::::S:::::::: HQ1736A :::::::L::::::::::L:::::::::::::::::VG:::::::VTL:::S:::::::: rrnAC0556 ::::G::::::::E::::V:A:::K::::::::::::::::::::::::::SE:VD:::H Hmu1342 :::::R:L::::::::::::::::G::::::::::::::::::::V::::::::V::::: consensus AIASCTSCSMALRQEYPELFDIDGIEDVAANTFEALEYLRIHEDLRGELQDADVDGE--Q #oth 2111.1...11......1..122.2131141.1113.....1.21232234143424224 Hut2169 V:CT:S:::L:::::::D:::LE::DEL::H:YD:M:::::::::EA::AG:NAEEF::P hla2209 V::::::::LS:::::::::::H:::::SDH:Y::::::::N:::E:::A:TKLA::::: HVO_1540 I:::::::::S::::::::::::::::LS:H:Y::::::::::::E:AVRE:S::D-::: Hbo0005 IV::::::::S:::::::::EYH:T:E:::::Y::M:::::::::ES::K::S:SE-::: HVO_A0271 V::::::::LS:::::::::::::::::SD:::::::::::::N:::A:A::EL::-::E VNG1972 ::::::::::::::::::::::::::T::S:::::V:::::::P::ETV:S::I:::LAD HQ1736A ::::::::::::::::::::::::VDT:SR::::SV:::::::N::S:I:S::::DAIEK rrnAC0556 :::::::::::::::::::::::::DK::E:::::V:::::::::K::V:A:::::DLAE Hmu1342 :::::::::L:::::::::::::::::::E::::SI::::::::V::A::::EIGD:LAE consensus EFAYHAPCHARNQGLDRQAVELFRDLDGVTIEDVGDSCSGISGTYGWKEEKYETSMEIGE #oth 311..1...2.1..14..1..1.221111323................2...11..3..2 Hut2169 DV:::::::S:::::G:::::::E:VE:::VT::::::::::::::::S::::::::::: hla2209 S::::::::::::::S:::::T:::V::::M::::::::::::::::::::::::::::A HVO_1540 A::::::::G::::::::::::::Q::::EV:::::::::::::::::::::DK::Q::A Hbo0005 S:::::::::::::::::::::::E:::::::::::::::::::::::::::::::K::: HVO_A0271 S:G::G:::::::::H::V::::::V:::E::::::::::::::::::::::DK::K::: VNG1972 :::::::::::S:::::::::::G:::::G:D:::::::::::::::::::::::::::D HQ1736A ::::::::::::::IS:::::::GE::D:::::::::::::::::::::::::::::::: rrnAC0556 :::::::::S::::::::::::::::::AEVK:::::::::::::::::::::K:::::: Hmu1342 :::::::::::::::E:::::::::::::AV:::::::::::::::::D::::K::A::: consensus EMFDHMEHAEGDTGMTECPTCSMQMEHGTGYEIRHPLELLEAALVE #oth 1..1..2422243.2......11.....1..113..21.1241134 Hut2169 :::E:::ETDAEH::::::::::::::::::::S::MQ:::TV:T- hla2209 :::E:::D::::V::::::::A::::::::::VE:::Q:::D:VGS HVO_1540 D::::::::Q:SV::::::::::::::::::D:K:::Q:::E:::- Hbo0005 ::::::S::::NV::::::::::::::::::D:K:::Q:::E:::- HVO_A0271 ::::::R:::::A:I::::::A:::::::::::::::::::D:::: VNG1972 D::::::S::::::L::::::A::::::::::V::::::::::::D HQ1736A :::E:::AVDAT::::::::::S::::::::D::::I:::SV::IQ rrnAC0556 :::E:::::::E:::::::::A::::::S::::::::::::::::: Hmu1342 :::::::DV:ST:::::::::::::::::::D::::I::VA:::::