|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2702 | VNG2108 | rrnAC2515 | HQ1355A | hla0242 | HVO_0470 | Hbo1008 | Hmu3021 | Hut1960 |
1852 | VNG2108 | 2741 | 1459 | 1060 | 946 | 1552 | 1632 | 1586 | 1342 |
1899 | rrnAC2515 | 1459 | 2761 | 1101 | 1022 | 1610 | 1699 | 1666 | 1529 |
1391 | HQ1355A | 1060 | 1101 | 1998 | 1082 | 1301 | 1388 | 1020 | 1030 |
1288 | hla0242 | 946 | 1022 | 1082 | 1884 | 1136 | 1252 | 934 | 934 |
2113 | HVO_0470 | 1552 | 1610 | 1301 | 1136 | 2840 | 2056 | 1602 | 1472 |
2179 | Hbo1008 | 1632 | 1699 | 1388 | 1252 | 2056 | 2812 | 1615 | 1468 |
1914 | Hmu3021 | 1586 | 1666 | 1020 | 934 | 1602 | 1615 | 2778 | 1612 |
1777 | Hut1960 | 1342 | 1529 | 1030 | 934 | 1472 | 1468 | 1612 | 2721 |
404 symbols consensus -----------MLVCSACGRTYE---AEPWRC-ACGAPLDFAARP-P-----PDPTELDR #oth 111112222224351541232141143331111312422133542312133342255424 VNG2108 :::::::::::::::RS::A:::TGPE:::::R::EHAV:::E:::-::RATG:::AV:P rrnAC2515 ::::::::::::RT::V:D:E:P::R:::::::S::::::Y:MQ:L:D::::SQ:GQFS: HQ1355A :::::::::::------------:::------:------------:-:::::-------- hla0242 :::::::::::------------:::------:------------:-:::::-------- HVO_0470 MTTPPDLPARLR:A:DS::E::D::::WR:::::::E::::::D:T:S:AAT::DAD::Y Hbo1008 :::::MSLSNLS:R:::::E:::::T:WA::::D:::::::L:DAR:S:RSA:::R:F:D Hmu3021 ::::::::::::YH:E::::E:G::PDG::::::::HA::Y:R::L:DADSP::::T::: Hut1960 ::::::::::MER::TD:::::P::LEG::::::::S:::LGGL::-::DLPAQ:P:I:: consensus RRGLWAFADFLPV--EPRVSLGEGWTPLVDAAEWDAQFKLEYVFPTGSFKDRGAATMLSR #oth 341213245111311344221111211122243332531123231211211111224337 VNG2108 TA:::::SE::::AADDA:::::::::::S:S::::E:::D::C:S::Y::::::VLMT: rrnAC2515 TS:V:D::K:::M::DE::::::::::::::PG:::T::::SLH::::::::::::VIAE HQ1355A -------------::-----------------------------------------:I:T hla0242 -------------::--------------------------------------------- HVO_0470 :D:::::D::::T:::::A:::::M:::::::::E:S::::::::S::::::::T::::L Hbo1008 :::::S:::::::::G:H:T::::M::::::P::::A:::::::::::::::::T:T::V Hmu3021 D::::S:EP:::::::R:::::::::::::D:AF:::L::DS::::::::::::TVT::Q Hut1960 DS::::CEG::::::::L:T::::::::I::EATGL:Y:::HL::::::::::::VV::H consensus ALELGADRVVEDSSGNAGAAVATYAARAGIDAEIYVPADAKPAKLRAIERAGATPVRIEG #oth 15432332131111111131213111111211211..112123.2121111..432212. VNG2108 :AA::V::::::::::::::::Q:::::::::::::::::PA:::D:M:A::::T:PVA: rrnAC2515 :::V:::::L::::::::L:::S::::::L::::::::S::D::V:R:::T::DV::V:: HQ1355A :TR:E:N:::::::::::T:::::::::::::::::::SI::::R:::::T::::IS::: hla0242 ---------------------------------V:::::V:DS:::::R::::E:::::: HVO_0470 :S:::VE:::::::::::::::::::::::::::::::SV::S:V::::::::K:::::: Hbo1008 :T:::IEK::::::::::::I:::::::::::D:::::SV:A:::::::::::::::V:: Hmu3021 :DA::VE:::::::::::L:I:S:::::::::::::::::::T:::K:::T::DV::::: Hut1960 ::DR:::::I::::::::L:I:::::::::::::F::V::::G:::::::T::ALR::D: consensus SREAVTDACIDAVEDGDA--------------------WYASHAWNPAFFAGTATFAYEI #oth 3.43..3..332244221111111111111111111111......3.2.21..113.1.1 VNG2108 G:R:::E::VSEAVGS:::::::::::::::::::::::::::::S:S:Y:::::V:::: rrnAC2515 :::S::E:::::::::AG:::::::::::::::::::::::::::::::::::::A:::: HQ1355A :::Q::K:::ET:KSDE:::::::::::::::::::::::::::::::::::::A::::V hla0242 ::AD::E::VA:LGE::GGGGGGRGGRGGRKGDSADSA::::::::::::E::::V:::: HVO_0470 ::Q::::::VE:::AD:::::::::::::::::::::::::::::::::::::::V:::: Hbo1008 :::D:::::LE::::::G:::::::::::::::::::::::::::::::::::::::::V Hmu3021 T:GD:::::H::L-:::::::::::::::::::::::::::::::Q:::::::M:W:L:V Hut1960 D:::::Q:::::::A::G::::::::::::::::::::Y::::::E:M:L:::::::L:V consensus AAQRGWSAPDAVVTPLGHGTLFLGAYRGFRALRAAGWIDRMPRLLGAQAAGYAPIAAARH #oth 12..1.31..1..2.1.....1..11...32.651..1143.212.3..3.22.123334 VNG2108 ::::::R::::::V:V:::::L::::::::::A:G:::ES::::::V::::VE:V:::VN rrnAC2515 ::::D::V::::::::::::::::L::::Q::EQ:::T:AI::I::T::V::S:::DDDE HQ1355A C:::::::::V::M:::::::::::::::VD:LN:::::SL::::::::T::::::REL: hla0242 :F::D:E:::::::::::::::::::::::R:KR:::::EV:::F::::::I:::VREL: HVO_0470 ::::D::V::::::::::::::::::::::::YE:::T::::E:Y:::::::S:::D::: Hbo1008 :Y:::::::::::::::::::::::::::::::D:::::E::K:::::::::::V:EEL: Hmu3021 ::::::DV:::::V:V:::::L:::::::::::::::TE:V::::::::S:::::::G:P Hut1960 ::::::E::::::::::::::::::S:::DR:QR:::::DV:::F:I::S:V:::T:::G consensus GS----DADAVNDVADGIQIADPVRGDQILDAIAATDGDAVAVSAAATERELDRLHAAGF #oth 45452154453.33....1.33.3.432244.23212.212.222211243322.333.2 VNG2108 ::AS:::E::::EA::::::RS:A:L::VAA:V::::::V::CDES::TDA:AS::E::L rrnAC2515 :GTVP::DA:A::L::::H:R::P::R::RH::DE:::A::::::::::::R:::G:::: HQ1355A DISI::APTK::NR:::::::E:::RK:::T::N::::::I:L::D:VDTTV:A:::R:: hla0242 :ADAADPERR::AA:::::::E:::KRE:F::::D:::::L::TQ:::DW:::::::::: HVO_0470 H-::::T::ET:::::::::L::::EAE:HE:LD::G:::I:L::D:V:D::::::RH:: Hbo1008 :-::::PTEGT:::::::::R::T:L::::::VD::::::I:LTED:V:T::::::RR:: Hmu3021 A:DG::E::DA:E:::::::HR:A::::L:::L:::E:T::::D::::::AH:::AR::Y Hut1960 ND::::RDAER:NL:::::::E:::::G:::::E:SG::::::T::E::AGHE::LGE:L consensus YTEPTCAVAPAALRELRERGVLAADDDVVVPLTGSGLK------ #oth 321..1.2.3.1.532.331326353..1.2.1.2132621111 VNG2108 :V:::S:::V:G:AAY:A:::VGDS:::::A:::::::KP:::: rrnAC2515 HV:::::T:T:::P:F::::E:QDG:::::A:::RND-:::::: HQ1355A :::::::I:::::DVY:D:EIIV:H:::A:::::::::TIYNKF hla0242 :::::::::::::::::::::::PN:::::::::::::G::::: HVO_0470 :::::::::::::::::LS:::DR:A::::::::::::S::::: Hbo1008 :::::::::::::G:Y::::::SD::::::::::::::N::::: Hmu3021 QV:::::T:V:G:ERF:AA:TIT:EE::::V:S:QNY-:::::: Hut1960 DLD::S:T:L:G:ER:::Q::I:::S::::::::RNRSV:::::