|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1341 | hla0785 | VNG1480 | Hut0878 | rrnAC0875 | Hmu1782 | HQ2788A | Hbo2444 | HVO_2715 |
758 | hla0785 | 1644 | 410 | 576 | 474 | 643 | 551 | 592 | 632 |
561 | VNG1480 | 410 | 960 | 509 | 456 | 473 | 378 | 374 | 454 |
806 | Hut0878 | 576 | 509 | 1317 | 443 | 726 | 555 | 536 | 643 |
614 | rrnAC0875 | 474 | 456 | 443 | 1014 | 561 | 441 | 397 | 475 |
908 | Hmu1782 | 643 | 473 | 726 | 561 | 1363 | 668 | 637 | 655 |
817 | HQ2788A | 551 | 378 | 555 | 441 | 668 | 1418 | 722 | 725 |
877 | Hbo2444 | 592 | 374 | 536 | 397 | 637 | 722 | 1410 | 849 |
1029 | HVO_2715 | 632 | 454 | 643 | 475 | 655 | 725 | 849 | 1403 |
221 symbols consensus ------------------------------DLAAFDAVVYDLDGTLVRLAVDWDAVASDV #oth 111111111111111111111222212444333522112211111114141114422442 hla0785 MTADDGRTVETGGDAPKSAAGTVPSVDRPI::::Y::::::::::::E:::::G:::ES: VNG1480 ::::::::::::::::::::::::::::::------------------------------ Hut0878 ::::::::::::::::::::::::::::::MTVSYE::I::::::::::D:::TL:TQK: rrnAC0875 ::::::::::::::::::::::::::::::------------------------------ Hmu1782 ::::::::::::::::::::::::::::::MS:DY::::::::::::::::::::::::: HQ2788A :::::::::::::::::::::MRYLVMDYDS:SE:E:::W:::::::::S::::T::::: Hbo2444 ::::::::::::::::::::::::::MPTC:::P:::::W:::::::H:::::G:::TEA HVO_2715 ::::::::::::::::::::::::::MTLP::S::::::::::::::D:R:::NDA:::A consensus AAVLREAGIDADG-DLWEMLELADDAGIRDAVEAAIADHEREGARESDRLPLADDL---- #oth 5433353232454632152.431334131243253225..26..35141.2323531111 hla0785 LE:YA:HAMIPPTDE::GL::A:G:Y::::P::E:::V:::S:::::VL:::GGR:IESV VNG1480 -------------:-M:SV:AT:::::V:T::DDI:TE::LA::DTAA:::A:::I:::: Hut0878 :SR::DR:::TE:AS:::L::R:EA:::L:VATEVV:T:::V:::TAE:::A:AE::::: rrnAC0875 -------------:----::T:SSET:H::::::::T::::T::H:::::A::EG::::: Hmu1782 DD::::R:V:TA:HS::D::::SEER:H:::::S:::::::P:::D:E::::L:E::::: HQ2788A TE:FQT::::VSDI::::::N::SKR::::E::TV:SR:::R:::AA:::TH:::V:::: Hbo2444 E:TF:A:::::::T:::G::D:::ESDM:EDI::ILSE::Q::::R:K::AC:ETM:::: HVO_2715 :::::N::V:::SL:::K::DA:::::V::DL:REL:A::::::WL::::::::H::::: consensus --PRD-VPVGVCSLNAEAACRVALDTHDLDDHVDA--VVGRDTVATRKPDPEPLLATLDR #oth 112543223......1.2.124.1331224422421112...12425....331244342 hla0785 EDG:ESP:A::::::C:E:::::VE::G:G:AL:PDAI::::::D:H:::::SV::AVE: VNG1480 :::::::::::::::::::::R::AA:E:A:A:AV:::A::::TPAM::::RA:EWVTTE Hut0878 :::L:::::::::::::::V:T::ER:::LEA:E:::::::::LSAQ:::::::::LA:: rrnAC0875 :::HS::::::::::::E:::A:::V::::SY:GP:::::::::ESP:::::G:::IT:E Hmu1782 :::L:::::::::::C:::::I::E::GV:G:::::::::::SLS:Y::::A::R:L:SE HQ2788A ::GNIAPQE::::::C::::KI::Q:QEI:V::T::::T:::::E:Q::::S:::H:::Q Hbo2444 ::GTF:EVE::::::C::::H::::::::AG:A:::::::::S::::::::::::E::R: HVO_2715 ::AD:G::S::::::::D:::::::V:::S::::::::::::S::::::::::::T::E: consensus LDVDPAAALFVGDSARDETTADRAGVAFRWVEEGPSG---- #oth 3312.3411.1..142.231.4..223.3116466652111 hla0785 :GA:::R:::::::R::AVA:K::::P:A:AADLIDR:::: VNG1480 :G:A::DT:::::::S:::::E:::AD:Q::------:::: Hut0878 ::A:::RT:::::T:K::R::::::MD:QY:::WLEK:::: rrnAC0875 IG:::E:TV:::::ES:A:A:Q:::MT:E:AS:FDQARYRA Hmu1782 F::S:S::::::::DS:A:A:R::SMD:Q::R:RH:L:::: HQ2788A :S:::DT:V:I:::P::::::K::D::::YA:TVTR-:::: Hbo2444 M:AA:DD:V:::::R::KL::E:::::::Y:GD::::V::: HVO_2715 MA:::DS:V:::::::::V::::::::::Y:DG::T:V:::