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8 genomes BUD0888 8 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1455

rrnAC0291

HVO_2711

Hbo2440

Hmu1382

Hut1959

hla1428

-

HQ2409A

Pairwise sequence scores
Consensus score2678 Hut1959 Hmu1382 rrnAC0291 hla1428 VNG1455 HQ2409A HVO_2711 Hbo2440
1429Hut1959 2662 1041 1008 975 1077 1123 1153 1160
1736Hmu1382 1041 2657 1649 1698 1280 1117 1339 1269
1755rrnAC0291 1008 1649 2724 1960 1249 1159 1305 1389
1719hla1428 975 1698 1960 2703 1239 1179 1256 1228
1579VNG1455 1077 1280 1249 1239 2607 1128 1361 1271
1687HQ2409A 1123 1117 1159 1179 1128 2947 1686 1767
1882HVO_2711 1153 1339 1305 1256 1361 1686 2712 1871
1870Hbo2440 1160 1269 1389 1228 1271 1767 1871 2715

401 symbols
consensus       -------------------------MARRGLSRVALLALALAAAAGPASAHVKYVTDG-G
#oth            11111111111111111111223446764645553634375334223221.12..12323
Hut1959         ::::::::::::::::::::::MSTASE:T:LT:L:A::SS:ILS::::::I:::::E:D
Hmu1382         ::::::::::::::::::::::::::TFSKV:::::ALVG:::I:R::A:::D::::PT:
rrnAC0291       ::::::::::::::::::::::::::DT:IP:FIGTV::V:TLLSR::A:::D:::E:P:
hla1428         ::::::::::::::::::::::::MSV:SRPVA::A:::FATLV:R:VA:::D:::EDT:
VNG1455         :::::::::::::::::::::::::---------------MPPV:PASPG::R::S:::A
HQ2409A         MLGDSDSQSQSQSGEQSCSQKTRCIRL:L::ILSLC:IAPVTL:T:RV::::::::P:::
HVO_2711        :::::::::::::::::::::::MTQHV::AT:L:G:VAL:::G::S:::::::::P::S
Hbo2440         ::::::::::::::::::::MKQRPF:AQFV:FT:VVVV:IV::T:R:::::::::P::S

consensus       DPVDAAAFLVAVLSDPFNAAVLAGGGLAVGAGLAAYLRFRPARRDVAILRRTLAGYRDLL
#oth            324412314652134.3221222211242443423113421445.2422143133.5323
Hut1959         SAGS::ELFA::FN::GSV:L:V::A:GA:LLITG::::SRLVP:I:VAS:::QS::PY:
Hmu1382         :A:::I::VRET:AV:V:::LFV:S:AVAVT:::L:::Y::RVL:IE:::AK::T:E::I
rrnAC0291       EAL::V::AIS:::N:V::::FGIS::::TG::::::WV::TIA:IV:::DV:V::A::V
hla1428         ::I::VT:T:E:::E:L::::F::S::VAI:::::::WV::TIT::V:::EK:V::G::V
VNG1455         PTDR:I::::D:::T:L:::IV:A:AA::VTI:VVAV:YQ::AT::HA::DA::::HTFM
HQ2409A         :::AV:E::GRA:T::::LIL::::::FGIVAATL::QI::F:::L:VF:Q:MGE:::::
HVO_2711        :::EV::::S:A:T::::L:::GA::VG:AVAG::::::::LPN::RAF:::M:S:ES::
Hbo2440         E::EVVQ::LTA:::::TL:::GI::VT:::LV:L::HL::::::::VF:E:M:S:D:::

consensus       PWMLRLSVGLPLVGAGFQGYLFSPAVQ--PASPPFVRLFGIGIGFLLLFGLATRLVATVG
#oth            1.1...22....1....3..112.314114453343.223123..31...11..221321
Hut1959         ::::::T::::::::::A::::T:SL-::---:VEA::LQVA:::::::::::::::A::
Hmu1382         :::::::L::::::::::::::A:T:SFD:TAN:LL::AL::V::C:::::G::I:T:F:
rrnAC0291       ::::::::::::::::::::::A:T:TFD::TS:V::ILF::L::T::::::::I:T:I:
hla1428         ::::::AI::::::::::::::A:TLAFDTG:S:VL:VLF:::::FI:::::::IA::::
VNG1455         ::::::A:::::I::::T::FI:::::::----SPT:V:QVT::::::::::::A::L::
HQ2409A         S:L::::::::::::::S::F:::::T::IGP:V::::::VTT:::::::FG:::M:F:S
HVO_2711        ::L:::A::::::::::S::F::::::::SS::V:::::::TV:::::::FG:::::A::
Hbo2440         ::L::::::::::::::A::F:::L::::T:I:T:T::::::V:::::::FG::::::::

consensus       LVTYLG-GLAVDPALVLAFEYVPGFLAIALLGGGRPSADHLLARLAATDGTLYGRIDPFH
#oth            14614413.34314221.3..1221211421.2.1....331333123221411.31222
Hut1959         ::I::::L::T:ST:L::S::IA:::::MIV:A:Q::::M::R::VV:E:::AS:ARGLP
Hmu1382         MGL:VL:A:::S:DAL::L::::::V:LFV:::::::::DI:LDI:S:E:SI:::V:RV:
rrnAC0291       :::FGW:A:S:::GV:::M::::A:::LLI::::::::::M:Q:V:S::::Y:::V::V:
hla1428         :IM:AWVL::A:::V:I:M::::VLV:LVI::S::::::DM:LAV:S:P:SY::::::V:
VNG1455         :TA::A:E:V:H:E::::S::IG:::G:::::S:::::::::Q:V::A::S::::L::L:
HQ2409A         ::G:T::::ILE:T:L:::::::ALT:::::::::::::QVV:::::K:-:V:S:::::Y
HVO_2711        :G:::V:::::E::::::::::::::::::V:::::::::VV:SM::D:R:F:S:::::Y
Hbo2440         :LS::V::::FE:::F:::::::::::::::::::::::::V:::::D:-:::S:::::Y

consensus       RLVAF-FDERTAPYRRYVPTVLRVGLGISFVYLGVTQKLANPGRALAVVEKYDLTAVVPV
#oth            4424512343244335211421.212.32.32..341.233.13221..1..2..2....
Hut1959         TPAE-:MIA:VGIDKLP:APL::LFV:VN:MF::::::WL::AGGI::::::N:::::::
Hmu1382         L:K:W:L::L:::::::::::::::::V:::F:::::::GD:A:S:::::::::::::::
rrnAC0291       H:KG::L:TT::T::E:::VII:::M:VT:I:::LF::::E::Q::L:::::N:::::::
hla1428         H:KS::::AP:::L::::::I::::M::T:::::LIE:::D:::::L::::::::S::::
VNG1455         PV:DR::NDLIR:FE::A:::I:A:::FN:AL::FWE:::H:::::::::::E::T::::
HQ2409A         :A::VP:V::VSG:TWL::I:I::::::::M:::::::IM:::D:A:::A::N:::::::
HVO_2711        :R::LP:V:::RHLEA:::A:::::::LT::::::A:::ME::D:::::A::::::::::
Hbo2440         :A::VP:VR:VE::TSL::V::::::::::I:::IA:::M:::D:::::A::::::::::

consensus       DPELWVLGAGLTEAAVGVALIFGAFTRGAAAVSFLLFTTTLFGLPDDPVLAHITLFGLAS
#oth            2.11.13...21.42..22134.22..221132.221.1......1......12...12.
Hut1959         S:::::F::::V:::::::F:L:L::::T:::G::ML:::::::::::::::::::::L:
Hmu1382         ::G:::::::V:::V::L:::V:LL::AS:G:A::::::::::::Q::::::V::::M::
rrnAC0291       ::GM:::::::::ML::LV::::FM:::::::::V::::::::::::::::::::::M::
hla1428         ::G:::V:::V::I:::L:::A:F:::::::L::V:::A:::::::::::::VA:::M::
VNG1455         ::G:::::::A::L::::LFVL:L:::AT::TA::VL:::::::::::::::V::::MV:
HQ2409A         S::::II:::V::M:::AV:F::::::T:S::::I::::::::::::::::::S::::::
HVO_2711        A:::::V:::::::L:::L:VG:::::A:SG:A::::::::::::::::::::S::::V:
Hbo2440         A::::IV::::::VL:::::L::::::::::I:::::::::::::::::::::S::::V:

consensus       ALLVTGSGPLSLDRLLGRAAARDAEPDPAARG--A------
#oth            .1223.2.23.3.2424554543545263343341332111
Hut1959         ::::V:::RY:::AS:VP:IR:RLD::WER:TDH:AAD:::
Hmu1382         ::VTL::::::::::::EEP:G:::TVS:S--::-::::::
rrnAC0291       :VFTM:A::::F:DWF::P:QS:R:TVVS:D-::-::::::
hla1428         :VFTL::::::F:::V::P:LD:D:AVI::D-::-::::::
VNG1455         ::F:::G:::::::V:DAWDD:T:T:Q:::::DD:GS::::
HQ2409A         :::I::G:RW:I:A:::G:GDPQSAV::E:TETP:DPSAAD
HVO_2711        ::::::G::::V::A:SSRG:D:::S:GD:S:RS:GA::::
Hbo2440         ::::::::AF:V:AW:HETDESQKHE:T:PS:T:-::::::