|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1696 | rrnAC0497 | Hmu0629 | Hut2731 | Hbo0714 | HQ1562A | hla1286 | VNG0535 | HVO_0820 |
727 | rrnAC0497 | 1167 | 652 | 678 | 620 | 565 | 563 | 424 | 633 |
1241 | Hmu0629 | 652 | 1820 | 1059 | 1069 | 1069 | 1109 | 446 | 1060 |
1238 | Hut2731 | 678 | 1059 | 1707 | 1051 | 1050 | 980 | 467 | 1012 |
1334 | Hbo0714 | 620 | 1069 | 1051 | 1743 | 1235 | 1155 | 470 | 1115 |
1357 | HQ1562A | 565 | 1069 | 1050 | 1235 | 1735 | 1197 | 406 | 1073 |
1313 | hla1286 | 563 | 1109 | 980 | 1155 | 1197 | 1822 | 453 | 1115 |
500 | VNG0535 | 424 | 446 | 467 | 470 | 406 | 453 | 710 | 491 |
1289 | HVO_0820 | 633 | 1060 | 1012 | 1115 | 1073 | 1115 | 491 | 1704 |
254 symbols consensus VTGYLEILVVAFVAQLAVLPGEKVQFIIAGLSTRYDPLVVVAAAGSAFAGWTALEILFGQ #oth 224341123213341121111111112112111223131112111211121112113213 rrnAC0497 ------------------------------------------------------------ Hmu0629 :::FV::VA::MI:::S::::::::::::::::K:N::::::::::::::::::::A::A Hut2731 ::E:::::::::GM:::::::::::::::::::::H:::::S:::T::::::::::G::N Hbo0714 :::::::::I:::Y:::::::::::::::::::::N:::::::::::::::::::::::: HQ1562A MST:::::II::IT:::::::::::::::::::::::I:::::::::::::::::::::: hla1286 ::A:A::V::::::::::::::::::M::A:::::::K:::::::::::::::I::A::: VNG0535 ------------------------------------------------------------ HVO_0820 :::WW::::::L:T::::::::::::::::::::F::K:::::::::::I:::::::L:: consensus ALQAALPPIALDAITAGLFLLFAVLLYRSAPDAN------SPQSAAETDGGVA------- #oth 123321233313231142143113123112166422321145653453112652212222 rrnAC0497 -----------------M:::::I::L::::A:GAEQQ::E:A:GFT::::QL::::::: Hmu0629 :I:::::GVY:::F:::M:::::::::::::TTGA:::::Q:EP::IA::DG:GADHRTD Hut2731 :::N:::E:Y:T:F:::::V:::::MI::::EP:::::::--D:TTK:::::T::::::: Hbo0714 :IRS:::::::N::::A:::T:::::::::::S:::EP:::H:::T:::::F:::::::: HQ1562A ::::V::::::NVV::S::::::I:::::::SN:NTNPDV:DTTT::::::L:::::::: hla1286 :::S:::GVV:::V::V::FV::Y:::::M:NRE:::::::G:I:SDG::DPEAVDSDPE VNG0535 ----------------------------------::::::-------------::::::: HVO_0820 ::KN::S:A:::::::V::AT::::::::::::S::::::AESE::T:::::S::::::: consensus -------ALEAVTLPGPLNRVPGSFGGFLPIFAMMAAGEFGDKTQLVTIGLAAQYGA-TS #oth 2221124453743242447544442122211141122........11..1..32.1.112 rrnAC0497 :::::::---D:RV:VVDWQ::NKL:::::::::::F:::::::::I::T:::::S:HA: Hmu0629 GGTATVDLP:V:::A:REFT::DR::S:::::LL::::::::::::I::T:::E:::::A Hut2731 ::::::ESVGTLDVSVFGYE::ALL::W:::::::::::::::::::::::::D:::::: Hbo0714 ::::::DPADQAD:::::T:LS::::::I:::V::::::::::::M::::::ID:::::: HQ1562A ::::::::::M::::::::::S::::::::::IL:VT:::::::::::::::V::::::: hla1286 PSDATLA:::S:::::::D:YA::::::::::VLT:T:::::::::::::::V::::::: VNG0535 :::::::--------------------------::F::::::::::::::::SD:::::P HVO_0820 ::::::GLDD:P:VF:RELSTQ:-::::::::::::::::::::::::::::V::::::: consensus AIWAGEMLAIIPVSLANAYFFHRFSHRFDLRKAHLGSAALFGFFAADTVLSIAAGFSVWE #oth ...5......1.1.22..11.23.112113.211132.4..4..13.331334421.2.. rrnAC0497 :::T::::::::::::::L:::::A:::N:::::FVG:G::L:::::FA::VTM:V:L:: Hmu0629 ::::::::::V::::L:::::YT::::::::::::FG:I:::::GL::::::LT:::I:: Hut2731 :::V::::::::I::L::::::::::MVN:::::F:G::::::::::N::K:V::::L:: Hbo0714 :::F:::::::::::::::L::K::::::M::V::L:::::C::GL::::QMTMNV:::: HQ1562A :::I::::::::I::::::L::S::G:VNM:T:Y::::L:::::GI:AIM::LFD::::: hla1286 :::L::::::::I:::::::::T:A::::M:R::::::V::A::G::::::::::::::: VNG0535 :::L::::::::::MV:::::D:::GK::A:::::V::V::F:::G::L:EVSV:V:::: HVO_0820 ::::::::::::::I::::::::::::::T:::Y::A:G::A::::::L::L:T:::::: consensus TIVATISAAVLAAV #oth 24264324423332 rrnAC0497 :M:SS:A:Q:G:-- Hmu0629 :::DALTT:L::V: Hut2731 E:IT:::SV::::: Hbo0714 SA:KAVA:GLGV:- HQ1562A ::I:E:TT::S::: hla1286 :FME:V:::ASGLF VNG0535 EL::LA:QLL---- HVO_0820 :L:G:A:D::::LF