|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2069 | hla2653 | VNG0583 | Hbo0693 | HQ1550A | HVO_0842 | Hut1270 | rrnAC0732 | Hmu0765 |
1705 | hla2653 | 2070 | 1600 | 1656 | 1656 | 1697 | 1599 | 1601 | 1569 |
1860 | VNG0583 | 1600 | 2099 | 1805 | 1813 | 1785 | 1688 | 1727 | 1729 |
1933 | Hbo0693 | 1656 | 1805 | 2074 | 1949 | 1886 | 1747 | 1778 | 1755 |
1905 | HQ1550A | 1656 | 1813 | 1949 | 2069 | 1890 | 1700 | 1748 | 1735 |
1902 | HVO_0842 | 1697 | 1785 | 1886 | 1890 | 2054 | 1746 | 1725 | 1701 |
1851 | Hut1270 | 1599 | 1688 | 1747 | 1700 | 1746 | 2094 | 1765 | 1724 |
1860 | rrnAC0732 | 1601 | 1727 | 1778 | 1748 | 1725 | 1765 | 2067 | 1940 |
1819 | Hmu0765 | 1569 | 1729 | 1755 | 1735 | 1701 | 1724 | 1940 | 2056 |
270 symbols consensus MSLERKDDHDHKAWMKKKDLTPIESVFLTTLIWLDKRLRIVDYLELLETLYYRVNLQMPK #oth ..1112.12..22.212211142.341..3.2.1.1.1.1.....11.21..11.1.... hla2653 :::KKQ:EM::N::L:EQ:::V::TA:::::::::::::::::::::::M:::A:::::: VNG0583 ::I:::::::::::I:E::::A:::T:::V:V:::R:::::::::::::::::::::::: Hbo0693 :::::::E::::G:::::::::V::::::::::::::F::::::::M::::::::::::: HQ1550A ::::K::EY:::S::::::::::::::::S::::::::::::::::M::::::::::::: HVO_0842 ::::::::Y:::::::::::::V:AT:::::::::::::::::::::::::::::::::: Hut1270 :::::P:::::D:::E:R:FSRV:RMY::V:::F:::::::::::I::G:::K::M:::: rrnAC0732 :::::::E::::G::ESRE:::::::Y::V:::::::::V:::::I::D:::K::M:::: Hmu0765 ::::::::::::G::ESRE::TL::IY::A:L::::::::::::::::D:::K::M:::: consensus SHTEQYNLDNKFWYWYPLYALGSFSTLAYVVAAISGALLGFYYSPSAAA-ADG--DPTVA #oth ......2............2..21.121.2...11........1.222124522243.3. hla2653 ::::::D::::::::::::S:::L:II::L:::VT:::::::::::T:G::AAQG:::A: VNG0583 :::::::::::::::::::S::F::::S:::::::::::::::::::::ATC:VDGS::: Hbo0693 :::::::::::::::::::T::L:::::::::::::::::::::::S::GTEA::AG::: HQ1550A :::::::::::::::::::T::F::::::::::::::::::::::::::GGEA::AG::: HVO_0842 :::::::::::::::::::T::L::::::::::::::::::::::ATTG:---:::::T: Hut1270 ::::::G::::::::::::::::::::::I:::::::::::::::G:LG::S::::::I: rrnAC0732 ::::::::::::::::::::::::::V::I:::::::::::::A:A:::::::::S:::: Hmu0765 ::::::::::::::::::::::::::IS:::::::::::::::A:A::::S::::TA::: consensus YESVAFIMTDLNFGFMLRSIHRWAAQVMVAAVFLHMLRVYFTGAYKEPRELNWLIGIVLI #oth .42254..42111.12...2.1.1..2.1..............1......1..11.11.1 hla2653 :D::VM::K:VQ:::::::L:S::::F::::::::::::::::S::::::V::IL:VI:: VNG0583 :CA::G:::::::::F:::L::::::::T::::::::::::::S::::::V::::::::L Hbo0693 ::QI:::::::Q::::::::::::::::::::::::::::::::::::::::::L::I:: HQ1550A :Q:I:I::Q::Q:::::::::::S:::::::::::::::::::::::::::::::::::: HVO_0842 :N:IE:::R::Q:::::::V:::::::::::::::::::::::S::::::::::L::::: Hut1270 :::LT:::::::::::::::::::::::::::::::::::::::::::::::::L::::: rrnAC0732 :D::ML::GQ::L:YF:::V::::::I::::::::::::::::::::::::::::::::: Hmu0765 ::::QL::GE::L:YL:::::::S::::::::::::::::::::::::::V::I:::::: consensus SLTLVFGYTGYLLPWDQLAFWAGQIGVEMSLSIPLIGEWVAQLLFGGFTLGQATLQRMYI #oth 1..11..11..1...2..11..1......1.12..2.1.2...2....11211..1...1 hla2653 G:::L::FS::V:::K::S:::A::::::A:AT::V:::A:::::::::::::::V:::: VNG0583 :::M:::::::::::::::Y:::::::::::::::V:D:::::M::::S::::::::::L Hbo0693 :::M:::::::::::::::::::::::::::::::::::I::::::::::S:S::::::: HQ1550A :::M:::::::::::::::Y:::::::::::::::A:::I::::::::S::::::::::: HVO_0842 :::M:::::::::::::::::::::::::A::V::A::::::::::::S:::S::::::: Hut1270 ::::L:::S::::::::::::::::::::::::::::::::::I:::::PNP:::::::: rrnAC0732 :::::::::::::::S::S::::::::::::::::::::::::M::::::S::::::::: Hmu0765 :::::::::::::::S::SY:::::::::A:::::::::::::M::::::S:S::::::: consensus LHVFLLPFVVTTLIAIHIGIVWMQGIAEPH #oth 1...2...11.22..2.211..1....... hla2653 ::::V::::::G:::L:V::::V::::::: VNG0583 ::::::::::::V::::L:L:::::::::: Hbo0693 ::::::::::::::::::::::V::::::: HQ1550A I:::::::::::::::::::::V::::::: HVO_0842 I:::::::::::::::::::::V::::::: Hut1270 ::::F::::::::::V::A::::::::::: rrnAC0732 ::::F:::IT:AI::V:::::::::::::: Hmu0765 ::::F:::IT:AI::V::::::::::::::