Home |  Text search
[C] (CyoB) COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1
8 genomes BUD0901 12 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0657

rrnAC0880

rrnAC1278

HVO_0907

Hbo0131

Hbo0636

Hmu0914

Hmu1697

Hmu1896

Hut0727

-

NP2456A

HQ1611A

Pairwise sequence scores
Consensus score4501 rrnAC0880 NP2456A VNG0657 Hmu1896 Hut0727 HQ1611A HVO_0907 Hbo0636 rrnAC1278 Hmu1697 Hmu0914 Hbo0131
2518rrnAC0880 5818 2393 2442 2327 2361 2276 2265 2239 2398 2323 2450 2647
3533NP2456A 2393 4569 3141 3204 3312 3194 3216 3230 3280 3304 2418 2618
3548VNG0657 2442 3141 4604 3144 3234 3228 3283 3319 3220 3334 2339 2632
3520Hmu1896 2327 3204 3144 4675 3375 3205 3213 3225 3343 3346 2315 2488
3809Hut0727 2361 3312 3234 3375 4517 3449 3482 3493 3560 3403 2340 2599
3903HQ1611A 2276 3194 3228 3205 3449 4919 3911 3990 3507 3458 2295 2585
3854HVO_0907 2265 3216 3283 3213 3482 3911 4538 3958 3558 3541 2326 2546
3960Hbo0636 2239 3230 3319 3225 3493 3990 3958 4500 3519 3504 2305 2573
3794rrnAC1278 2398 3280 3220 3343 3560 3507 3558 3519 4565 3826 2320 2626
3744Hmu1697 2323 3304 3334 3346 3403 3458 3541 3504 3826 4529 2349 2570
2464Hmu0914 2450 2418 2339 2315 2340 2295 2326 2305 2320 2349 4005 2506
2869Hbo0131 2647 2618 2632 2488 2599 2585 2546 2573 2626 2570 2506 5176

855 symbols
consensus       ----------------------------M---QL-LTVLMGVLLVGVAAW-------LAR
#oth            111111111111111111111111112244455342443343235345451111111331
rrnAC0880       :::::::::::::::::::::::::::::LNRAIVEGTALA::ALA:LFL:::::::WV:
NP2456A         :::::::::::::::::::::::::::::AAE::A:A::::A:VLAAFGF:::::::V::
VNG0657         ::::::::::::::::::::::::::MATAASSIT::::::::::::V:V::::::::::
Hmu1896         ::::::::::::::::::::::::::::-:::--:----:VA:VA:A::V:::::::VT:
Hut0727         :::::::::::::::::::::::::::::AGE::A::::::I:::::::F::::::::T:
HQ1611A         MFGYVHFHDIASRYPESFIMPGFFGSHMEVNG::V::A::::F:I::T::::::::::::
HVO_0907        ::::::::::::::::::::::::::::-:::--:----:::F:IA::::::::::::::
Hbo0636         :::::::::::::::::::::::::::MQVNG::A:::::::F::A::::::::::::::
rrnAC1278       :::::::::::::::::::::::::::::VAGDIV::G::A::::::::L::::::::T:
Hmu1697         ::::::::::::::::::::::::::::-:::--:----:A::::VIVGA::::::::::
Hmu0914         ::::::::::::::::::::::::::::-:::--:---------------:::::::V:-
Hbo0131         :::::::::::::::::::::::::::::SLPFVP:LAVVSAF:G:WLY:RRGESTDTS:

consensus       IENWRSY-TPLAGGG----------------------GV-GEETGYGHEE-KPAGLIRWL
#oth            6232242231732231111111111111111111111566456566546412132251.2
rrnAC0880       EQ--:QA:R:ESD::::::::::::::::::::::::YTTR::VEFEIGR:IQSE:S:::
NP2456A         VQ::H--:L:FV::Q::::::::::::::::::::::R::--A:DG::AH:::::IT:::
VNG0657         L:D::::::::SDV::::::::::::::::::::::::GL::R:::T::::::G:I:::F
Hmu1896         L:::::::::AV::::::::::::::::::::::::::GTVD::AH-:G::::G::T:::
Hut0727         ::D::::AS:T:S::::::::::::::::::::::::T::-S::::::R::::::VL:::
HQ1611A         ::::::::::I:::::::::::::::::::::::::::SYEQSDS:VSD:::::::::::
HVO_0907        V:D::::::::::::::::::::::::::::::::::T:G:TAEQ:VS:::::S:V::::
Hbo0636         :::::T::S:::::S:::::::::::::::::::::::AF:QKE::VS:::::S:V::::
rrnAC1278       V::::::::::::::::::::::::::::::::::::A:T:D::AVINR::::::I::::
Hmu1697         A:D:::::::::S:::::::::::::::::::::::::Y:::A::H::A::::G::V:::
Hmu0914         -------:R:MTDR-::::::::::::::::::::::--:----------:R:GV:SP::
Hbo0131         T:SL:DAVSLRTD::ERRADGGERRADNSASHGETLP::I:SLY:RE:KTG::Y::M::V

consensus       TTVDHKDIGILYGAFALIAFAWGGLMVMLMRTELATPGMTIISNSFYNALLTSHGITMLF
#oth            .12..1...31.2511341221.1331243.41.531464445365.1221.1..2...1
rrnAC0880       ::T::R:::L::IF:GTA:GL:::VDA:ML::::L::PAD:WTPET::::F:T::L:::I
NP2456A         :::::::::::::IYGV:::L:::VA::F::F::W:::A:HM:TEM::::::::::::::
VNG0657         :::::::::::::VYGT:::::::VS:L::::::::SSE:L::P:L::G:::::::::::
Hmu1896         :::::::::L:::T::VL::::::VA:V:::F::V::TSNFLQPAM::::::::::::::
Hut0727         :::::::::L:::L:::::L:V:::A::V::L::V::SSN:V:A::::::::::::::::
HQ1611A         :::::::::L:::::G:T:::V:::::V:::I:::D::::V:::T:::S:::::::::::
HVO_0907        :::::::::M::::Y::V:::V:::::V:::I:::D:S::L:::T:::S:::::::::::
Hbo0636         ::::::::::::::Y::::::V:::::VV::V:::D::::L:::T:::S:::::::::::
rrnAC1278       :::::::::L:::VY:V::L:V::I:A::I:IQ:V::AGA:LG:NA::SI::::::::::
Hmu1697         :::::::::::::VY:VV:::V::I:A::I:VQ:TL::GV:VG::Y::S:::::::::::
Hmu0914         ::L::R:::RY:LL:GALSGV:::TDALAV::::LS:AVDLWPPGT:D:FF:T::V::::
Hbo0131         :S::::::::::LL:G:A:GL::ATDAVMI::::F::TTDVWDAHT::::F:T::L::::

consensus       LFGTPIIAAFANYFIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIP--------
#oth            1.21.232122..22....1........1..11....11222.212.2355224642211
rrnAC0880       F:VL:VFFGIG::VL:::::::::::::V:::G::::L::LI:VRM:LMMQVLGQVLN::
NP2456A         ::::::::::::::V::::::::::::::::::::::::G:I:::::::TM:LDI:::::
VNG0657         :::::M::::G::::::::D:::::::::::::::::::G:I:::S::L-::::::::::
Hmu1896         ::::::L:::S:::V:::::::::::::::::::::::FG:V:::::::-::::::::::
Hut0727         ::::::::::G::::::::::::::::::::::::::::G:::::S::L-::::::::::
HQ1611A         ::A:::::::S::L::::::::::::::::::::::::::::::::::::::::::::::
HVO_0907        ::::::L:::S:::::::::::::::::::::::::::::::::::::::::::::::::
Hbo0636         ::::::L:::S::::::::D::::::::::::::::::::::::::::::::::::::::
rrnAC1278       :::::::::::::::::::::::::::::::::::::::::::::::::LA:VTDN::::
Hmu1697         ::::::L:::::::V::::::::::::::::::::::::::::::::::TA:LTGN::::
Hmu0914         F:A::VAFG::::LV:::::::::::::V::T::::::::LV:AR::TVGHLLGVG::::
Hbo0131         F:V::VFTGL::::L::::D:::::::::::::::::::SFV:VR::LLTEVLAKMIDAV

consensus       --------GIAPAQ------------TAWTMYTPLSV-----EQPNPGVDLMLLGLHLSG
#oth            1111111162412511111111111132..1.3.113131313343223.212.....2.
rrnAC0880       ::::::::LVL::DAIRFFLTMREVSVG::L:A:::::::::Q::::QI::L::::::::
NP2456A         :::::::::VG::E:::::::::::::S::::::::::::::::S:A:::::::::::T:
VNG0657         :::::::::::T:::::::::::::::S::::::::L:::::QMSS:A::M:M:::::T:
Hmu1896         ::::::::::::::::::::::::::::::::::::L:::::D::S:AI:::I:::::T:
Hut0727         ::::::::::::S:::::::::::::AS::::A::::::::::::HL:T:M:::::::T:
HQ1611A         ::::::::EVI::::::::::::::::G:::::::::GEGMGN:A:A:::::::::::::
HVO_0907        ::::::::DVI:::::::::::::::::::::::::AGAGSGN:V:A:::::::::::::
Hbo0636         ::::::::DVI:::::::::::::::::::::::::AGVGNGN:V:A:::::::::::::
rrnAC1278       ::::::::M:E::R::::::::::::::::::::::::::::::A:::::::::::::::
Hmu1697         ::::::::E:E:::::::::::::::::::::::::A:::::::A:::::::::::::::
Hmu0914         ::::::::WL::PA:::::::::::::G::::P::::::::::G:GL:F:FL::::::A:
Hbo0131         GPRIEFLYALE:PT::::::::::::PG::L:V:QAI:::::QLT::Q:::L::::::::

consensus       VSATMGAINFIATIFTERGEDVSWANLDIFSWTMLTQSGLILFAFPLLGSALLMLLLDRN
#oth            21122111.2.2..13.152614.221..2..23.111122.....21..123...1..1
rrnAC0880       IAT:V::::::T::VY::::G:::::::::::N::VT::IA:::::::::::V:::::::
NP2456A         ::::::::::::::::::SD::T::::::::::I:::::I::::::::::::::::::::
VNG0657         ::::::::::::::::::::::G:PD:::::::::::::::::::::F::::I:::::::
Hmu1896         :::::::::::::::::Q:::ID::::::::::V:V:::Q::::::::::::V:::::::
Hut0727         :::::::::::V:::::::D:::::::::::::::::::I::::::::::::I:::::::
HQ1611A         ::::::S::::::::::::KN::::::::::::I:::::::::::::::::IM:::F:::
HVO_0907        ::::::::::::::::::D:K::::::::::::V:::::::::::::::::I::::::::
Hbo0636         :::::::::::::::S::A:E:T::::::::::V::::::::::::::::::::::::::
rrnAC1278       :A::::::::::::::::N:E:N::::::::::I::::A::::::::::::IV:::::::
Hmu1697         :A:::::::::::::::::DG:N::::::::::V:::::::::::::::::MI:::::::
Hmu0914         ::TILS:V:L:V::VM::-:S:T::T:::Y::S:::TA::V:::::V:::T::::::::H
Hbo0131         LATV:::V:I:V::::::::R:G:S:M::L::SL::T::I::::::I:::::::::::::

consensus       FGTAFFAT-EGGGPILWQHLFWFFGHPEVYILVLPPMGLVSYILPKFSGRKLFGFKFVVY
#oth            31.5..35143.22211......1......112..22.13.411.1.3..1...1211..
rrnAC0880       L::::::::::::A:::::::::W::::::::F::AT::M:L:::::V::::::YQ:I::
NP2456A         :::L:::::::::::::::::::::::::::::::M:::::W:::::A::::::::::::
VNG0657         :::T::TV:A::D::F::::::::::::::V:::::::I::L::::::::::::::::::
Hmu1896         M::::::IG::::TL::::::::::::::::::::::::I:::::::C::::::::::::
Hut0727         L::L:::V:D::N::::::::::::::::::::::::::I:::I:R::::::::::::::
HQ1611A         :::S:::G::-::A:::::::::::::::::I::::::II:::::R::::R:::::::::
HVO_0907        :::M::SV:D-::A::::::::::::::::::::::::I::LV::R:A::R:::::::::
Hbo0636         ::::::V-:N::D:::::::::::::::::::::::::I:::V::R::::R:::::::::
rrnAC1278       LA:T:::V::::::L::::::::::::::::::::::::::L::::::::::::::::::
Hmu1697         LA:T:::::GN::TM:::::::::::::::::::::::::::::::::::::::::::::
Hmu0914         V::V:::::D::::::F:::::::::::::::I::A:::I:H:::R:A::R::::RY:::
Hbo0131         :::::::L::A::::::::::::::::::::::::AF::T:Q:::::A::R::::::I::

consensus       STLAIGVLSFGVWAHHMFATGIDPRLRASFMAVSLAIAIPSAVKTFNWITTMWNGNIRLT
#oth            ...11.............3113...2231..12111.11...1.1...11.1.1.32..1
rrnAC0880       :::GL:::::::::::::T:SA:::VKL::::::I:::V:::I:V::::::::E::::::
NP2456A         ::::::::::::::::::GS:::::I::::::T::::::::::::::::::L::::::::
VNG0657         ::::::::::::::::::T::::::I:S:::::::::S::::::V::::::::::KL:::
Hmu1896         ::::L::::::::::::::::M:::::GA:::ITIS::::::::::::MA:::::RL:::
Hut0727         :::::::::::::::::::::::::::::::::::::::::::::::::::::::R::::
HQ1611A         :::::::::::::::::::::L::::::::::::::::V:::::::::::::::::::::
HVO_0907        :::::::::::::::::::::::::::::::::::::::::::::::::::::::K::::
Hbo0636         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1278       ::::::::::::::::::S::M:::::::::::::::::::::::::::::::::RL:::
Hmu1697         ::::::::::::::::::S::M:::::::::::::::::::::::::::::::::QL:::
Hmu0914         ::::::::::::::::::T:::::::Q:::::::::::V::::::::::::L:::RV:::
Hbo0131         :::::::::::::::::::::M:::::::::VIT::::V:::::::::MA:L::::V::E

consensus       APMLFCIGFVANFIIGGVTGVFLASIPVDLVLHDTYYVVGHFHYIVMGAIAFAGFAGIYY
#oth            1.1222312132.12..2..1.1.21.1112113.12..1...2222.4.31241113..
rrnAC0880       ::FML:A:GIGT::::::::::::V::::ILY:G:::::::::L::V:I:P:LMI:AS::
NP2456A         ::::::L::::::V:::I:::::::V::N:L::E::::::::::::::M::::::GA:::
VNG0657         ::::::::::Q:::::::::::::V::I::I::::::::::::F::Y:::G::L::AS::
Hmu1896         ::F:::V::I:::V:::M::::E:A:::::L:::::Q::A::::VI::G::::V::::::
Hut0727         T::::::::::::::::::::::::::I::I:T:::::::::::VI:::::::V:::V::
HQ1611A         T::::SV:::::::L::::::::::::::::::A::::::::::::::::::::::::::
HVO_0907        T:::::::::S:::L::::::::::::::::::::::::::::::::::::::::::L::
Hbo0636         T:::Y:::::S::::::::::::::::::II:::::::::::::::::::T:::::::::
rrnAC1278       T:::::::::S:::::::::::::::::::I:::::::::::::::::::G::A::::::
Hmu1697         T:::::::::S:::::::::::::::::::::::::::::::::::::::G::V::::::
Hmu0914         ::::::LAA:SL:VL::::::::::::::::::G:AF::::::LLLV:T:TT:L::AS::
Hbo0131         :::Q:LL:GI:L::V:::::I::::::::::::G:::::A:::F::V:I:::SM::AS::

consensus       WFPIYTGRMYQRTLAKAHFWLSMIGTNVTFFAMLLLGYLGMPRRYATY--------LPQF
#oth            .1.232..1.24211341122343.2331.321242.3411...412.322433212443
rrnAC0880       :Y:LI:::W:DTRM:RFQAL:IVF:SF:::MTL:VI:G::L:::QTI:::::::::P:EY
NP2456A         ::::V:::::N:R::::::::::::S:I::::::IA:::E::::::::EFDPNLAP:TEV
VNG0657         :::MV::::::KR::H::::TALV:S:A::L:::W:::G:::::::::::::::::I:::
Hmu1896         ::::::::W::::::::::::T:::::I:::P:I::::A:::::::::::DVAVGPIDL:
Hut0727         ::::::::::::::G:W::::T:::::::::::I::::V:L:::L::::NAITVGPIDVI
HQ1611A         :::L::::::::::G:M::::::::::I:::::I::::G:::::::::::::::::::::
HVO_0907        :::::::::::V::G:W::::::V:::L:::::I::::G:::::::::::::::::::::
Hbo0636         ::::::::::::::G::::::::::::::::::I::::G:::::::::::::::::::::
rrnAC1278       ::::F:::::::::G:::::F::V:::I::::::A:::::::::::::QFDGAIAP:T:V
Hmu1697         ::::VS:::::K::G:::::::::::::::::::A:::::::::::::NFDGAIAP:A:V
Hmu0914         :::LIV::W:DPG::R:::::TAV::VLA:CPL:VA:A::L:::M:::::::::::PAD:
Hbo0131         :Y:LF:::::NKR::TI:AV::IG:VI::::PLFI::LM:L:::S:Q:::::::::PV::

consensus       TTLHQIATVGALILLVGQLIFVWNVVQSWLEGPKVED-GDPWDLKEDGLFTREWQWFEQK
#oth            4341232.1.2311441333124.3241335.35133141.1324553365311513565
rrnAC0880       QLAQ::::::GY:IGLSA:LWLY:MLV:YWR:TP:TT:T:::G::ATSQ::::::::::H
NP2456A         :L:::AM::::V:IA::T:LWFV:::W::KK:TE:T::P:::NT::Y::HG::FA::::Q
VNG0657         A:A:RL:::::FLIG:ST::WLF:MAT::R:::R:DS:T:::::E:TDQ::ND:A::RA:
Hmu1896         :L::::::L:VVL:V::::L:L::::T::::::R:TS:N:::N:DR::MRA::FE::ASE
Hut0727         :L:::A::::::::F::::V::::IL::::D:::LT:::::::::D:::::::FA:N:DR
HQ1611A         A:::::T:L::::::A::I:::::FA::::::::::::::::::HDN::Y:A::E:YD::
HVO_0907        A::::V::::::::::::M:::::F:::::::R:::::::::::AA:D:T:A::T:::R:
Hbo0636         I:M:::::L:::::::::I:::::F:::::::::::::::::N:::E::Y:A::::YDR:
rrnAC1278       S:F::A:::::F::FI:::F::::I:::::::::::::::::::ES::MLD::F:::DEQ
Hmu1697         ::F::L:::::F::::::::::::::T:::::RR::S:H:::N:E:NDMLGN:FS::KEQ
Hmu0914         AVW:T::::::Y:IAT:::LWLL:::TAVRN:EL::NCPV:RSID------H::R-----
Hbo0131         :S:Q:::::::F::AISVG:WLF:M:N:FRA::V:R::P::::::ST:Q:S:::::::DR

consensus       LET------ALADGGEE------DP---DLLADGGQ------------------------
#oth            675322222353133444533323511155732136465522333322211111111111
rrnAC0880       MMDKYDMEPTEPETTRRSYAPEAE::::TG::G:VGTVAQTVSRNAWMAAVGGFVGTVLM
NP2456A         :AA::::::--T:::D:::::::--:::E:AT:::EP:::::::::::::::::::::::
VNG0657         E::T:::::V:P:::D:AQS:::EA::::AVT::::PAAD::::::::::::::::::::
Hmu1896         RLP::::::::T:::S:SEVSGASS:::E:RS:::SESEVSGASSELRS:::::::::::
Hut0727         IT-::::::--::ET:A:::::::A:::::W::::E::::::::::::::::::::::::
HQ1611A         :T::::::::I::::D:ET::::EE:::KV:T:::DVNSD::::::::::::::::::::
HVO_0907        ::::::::::VT::::D::::::ET:::E:AT::::TVDD::::::::::::::::::::
Hbo0636         VK:::::::::::::H:::::::--:::--------::::::::::::::::::::::::
rrnAC1278       ::-::::::--:EAP:K:::::::::::S:::::::::EE::::::::::::::::::::
Hmu1697         R:::::::::::::::::::::::E:::SVM:::::PGQQ::::::::::::::::::::
Hmu0914         ---::::::TRD:TSRD::::::--:::--------::::::::::::::::::::::::
Hbo0131         MSRDLARPRV:::::R:VVAVAD::SAD:SP:::PPEDDPSVDGPS::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC0880       SGGLITAILIGVLVPVSFGEIAELVGLPANPAIGAVLFLVGGTVTWPLLFLAFSDYLPGR
NP2456A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG0657         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu1896         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hut0727         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HQ1611A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_0907        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo0636         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1278       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu1697         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu0914         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo0131         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       --------------------------------------------------------SDEE
#oth            111111111111111111111111111111111111111111111111111111114166
rrnAC0880       LLFETGLVFATLISSGFAIAFYTGQSGLTFIGYLTFVLVSHWAYGIGLTVTFQYLK:::T
NP2456A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::A::A
VNG0657         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::T:
Hmu1896         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::E:G:
Hut0727         :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::T
HQ1611A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::A:AD
HVO_0907        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::A:AD
Hbo0636         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::S:
rrnAC1278       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::Q:DS
Hmu1697         :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::R
Hmu0914         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::----
Hbo0131         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::A:DS

consensus       S--------------
#oth            644444423221211
rrnAC0880       LRSRGGGGS::::::
NP2456A         Q::::::::::::::
VNG0657         :::::::::::::::
Hmu1896         DRPTDGD::::::::
Hut0727         Q::::::::::::::
HQ1611A         :DNDSTVDTHSEE::
HVO_0907        ANSADDA::::::::
Hbo0636         :DS::::::::::::
rrnAC1278       -::::::::::::::
Hmu1697         -::::::::::::::
Hmu0914         -::::::::::::::
Hbo0131         PADAHPADDVTETDE