|
Pairwise sequence scores | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 4501 | rrnAC0880 | NP2456A | VNG0657 | Hmu1896 | Hut0727 | HQ1611A | HVO_0907 | Hbo0636 | rrnAC1278 | Hmu1697 | Hmu0914 | Hbo0131 |
2518 | rrnAC0880 | 5818 | 2393 | 2442 | 2327 | 2361 | 2276 | 2265 | 2239 | 2398 | 2323 | 2450 | 2647 |
3533 | NP2456A | 2393 | 4569 | 3141 | 3204 | 3312 | 3194 | 3216 | 3230 | 3280 | 3304 | 2418 | 2618 |
3548 | VNG0657 | 2442 | 3141 | 4604 | 3144 | 3234 | 3228 | 3283 | 3319 | 3220 | 3334 | 2339 | 2632 |
3520 | Hmu1896 | 2327 | 3204 | 3144 | 4675 | 3375 | 3205 | 3213 | 3225 | 3343 | 3346 | 2315 | 2488 |
3809 | Hut0727 | 2361 | 3312 | 3234 | 3375 | 4517 | 3449 | 3482 | 3493 | 3560 | 3403 | 2340 | 2599 |
3903 | HQ1611A | 2276 | 3194 | 3228 | 3205 | 3449 | 4919 | 3911 | 3990 | 3507 | 3458 | 2295 | 2585 |
3854 | HVO_0907 | 2265 | 3216 | 3283 | 3213 | 3482 | 3911 | 4538 | 3958 | 3558 | 3541 | 2326 | 2546 |
3960 | Hbo0636 | 2239 | 3230 | 3319 | 3225 | 3493 | 3990 | 3958 | 4500 | 3519 | 3504 | 2305 | 2573 |
3794 | rrnAC1278 | 2398 | 3280 | 3220 | 3343 | 3560 | 3507 | 3558 | 3519 | 4565 | 3826 | 2320 | 2626 |
3744 | Hmu1697 | 2323 | 3304 | 3334 | 3346 | 3403 | 3458 | 3541 | 3504 | 3826 | 4529 | 2349 | 2570 |
2464 | Hmu0914 | 2450 | 2418 | 2339 | 2315 | 2340 | 2295 | 2326 | 2305 | 2320 | 2349 | 4005 | 2506 |
2869 | Hbo0131 | 2647 | 2618 | 2632 | 2488 | 2599 | 2585 | 2546 | 2573 | 2626 | 2570 | 2506 | 5176 |
855 symbols consensus ----------------------------M---QL-LTVLMGVLLVGVAAW-------LAR #oth 111111111111111111111111112244455342443343235345451111111331 rrnAC0880 :::::::::::::::::::::::::::::LNRAIVEGTALA::ALA:LFL:::::::WV: NP2456A :::::::::::::::::::::::::::::AAE::A:A::::A:VLAAFGF:::::::V:: VNG0657 ::::::::::::::::::::::::::MATAASSIT::::::::::::V:V:::::::::: Hmu1896 ::::::::::::::::::::::::::::-:::--:----:VA:VA:A::V:::::::VT: Hut0727 :::::::::::::::::::::::::::::AGE::A::::::I:::::::F::::::::T: HQ1611A MFGYVHFHDIASRYPESFIMPGFFGSHMEVNG::V::A::::F:I::T:::::::::::: HVO_0907 ::::::::::::::::::::::::::::-:::--:----:::F:IA:::::::::::::: Hbo0636 :::::::::::::::::::::::::::MQVNG::A:::::::F::A:::::::::::::: rrnAC1278 :::::::::::::::::::::::::::::VAGDIV::G::A::::::::L::::::::T: Hmu1697 ::::::::::::::::::::::::::::-:::--:----:A::::VIVGA:::::::::: Hmu0914 ::::::::::::::::::::::::::::-:::--:---------------:::::::V:- Hbo0131 :::::::::::::::::::::::::::::SLPFVP:LAVVSAF:G:WLY:RRGESTDTS: consensus IENWRSY-TPLAGGG----------------------GV-GEETGYGHEE-KPAGLIRWL #oth 6232242231732231111111111111111111111566456566546412132251.2 rrnAC0880 EQ--:QA:R:ESD::::::::::::::::::::::::YTTR::VEFEIGR:IQSE:S::: NP2456A VQ::H--:L:FV::Q::::::::::::::::::::::R::--A:DG::AH:::::IT::: VNG0657 L:D::::::::SDV::::::::::::::::::::::::GL::R:::T::::::G:I:::F Hmu1896 L:::::::::AV::::::::::::::::::::::::::GTVD::AH-:G::::G::T::: Hut0727 ::D::::AS:T:S::::::::::::::::::::::::T::-S::::::R::::::VL::: HQ1611A ::::::::::I:::::::::::::::::::::::::::SYEQSDS:VSD::::::::::: HVO_0907 V:D::::::::::::::::::::::::::::::::::T:G:TAEQ:VS:::::S:V:::: Hbo0636 :::::T::S:::::S:::::::::::::::::::::::AF:QKE::VS:::::S:V:::: rrnAC1278 V::::::::::::::::::::::::::::::::::::A:T:D::AVINR::::::I:::: Hmu1697 A:D:::::::::S:::::::::::::::::::::::::Y:::A::H::A::::G::V::: Hmu0914 -------:R:MTDR-::::::::::::::::::::::--:----------:R:GV:SP:: Hbo0131 T:SL:DAVSLRTD::ERRADGGERRADNSASHGETLP::I:SLY:RE:KTG::Y::M::V consensus TTVDHKDIGILYGAFALIAFAWGGLMVMLMRTELATPGMTIISNSFYNALLTSHGITMLF #oth .12..1...31.2511341221.1331243.41.531464445365.1221.1..2...1 rrnAC0880 ::T::R:::L::IF:GTA:GL:::VDA:ML::::L::PAD:WTPET::::F:T::L:::I NP2456A :::::::::::::IYGV:::L:::VA::F::F::W:::A:HM:TEM:::::::::::::: VNG0657 :::::::::::::VYGT:::::::VS:L::::::::SSE:L::P:L::G::::::::::: Hmu1896 :::::::::L:::T::VL::::::VA:V:::F::V::TSNFLQPAM:::::::::::::: Hut0727 :::::::::L:::L:::::L:V:::A::V::L::V::SSN:V:A:::::::::::::::: HQ1611A :::::::::L:::::G:T:::V:::::V:::I:::D::::V:::T:::S::::::::::: HVO_0907 :::::::::M::::Y::V:::V:::::V:::I:::D:S::L:::T:::S::::::::::: Hbo0636 ::::::::::::::Y::::::V:::::VV::V:::D::::L:::T:::S::::::::::: rrnAC1278 :::::::::L:::VY:V::L:V::I:A::I:IQ:V::AGA:LG:NA::SI:::::::::: Hmu1697 :::::::::::::VY:VV:::V::I:A::I:VQ:TL::GV:VG::Y::S::::::::::: Hmu0914 ::L::R:::RY:LL:GALSGV:::TDALAV::::LS:AVDLWPPGT:D:FF:T::V:::: Hbo0131 :S::::::::::LL:G:A:GL::ATDAVMI::::F::TTDVWDAHT::::F:T::L:::: consensus LFGTPIIAAFANYFIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIP-------- #oth 1.21.232122..22....1........1..11....11222.212.2355224642211 rrnAC0880 F:VL:VFFGIG::VL:::::::::::::V:::G::::L::LI:VRM:LMMQVLGQVLN:: NP2456A ::::::::::::::V::::::::::::::::::::::::G:I:::::::TM:LDI::::: VNG0657 :::::M::::G::::::::D:::::::::::::::::::G:I:::S::L-:::::::::: Hmu1896 ::::::L:::S:::V:::::::::::::::::::::::FG:V:::::::-:::::::::: Hut0727 ::::::::::G::::::::::::::::::::::::::::G:::::S::L-:::::::::: HQ1611A ::A:::::::S::L:::::::::::::::::::::::::::::::::::::::::::::: HVO_0907 ::::::L:::S::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0636 ::::::L:::S::::::::D:::::::::::::::::::::::::::::::::::::::: rrnAC1278 :::::::::::::::::::::::::::::::::::::::::::::::::LA:VTDN:::: Hmu1697 ::::::L:::::::V::::::::::::::::::::::::::::::::::TA:LTGN:::: Hmu0914 F:A::VAFG::::LV:::::::::::::V::T::::::::LV:AR::TVGHLLGVG:::: Hbo0131 F:V::VFTGL::::L::::D:::::::::::::::::::SFV:VR::LLTEVLAKMIDAV consensus --------GIAPAQ------------TAWTMYTPLSV-----EQPNPGVDLMLLGLHLSG #oth 1111111162412511111111111132..1.3.113131313343223.212.....2. rrnAC0880 ::::::::LVL::DAIRFFLTMREVSVG::L:A:::::::::Q::::QI::L:::::::: NP2456A :::::::::VG::E:::::::::::::S::::::::::::::::S:A:::::::::::T: VNG0657 :::::::::::T:::::::::::::::S::::::::L:::::QMSS:A::M:M:::::T: Hmu1896 ::::::::::::::::::::::::::::::::::::L:::::D::S:AI:::I:::::T: Hut0727 ::::::::::::S:::::::::::::AS::::A::::::::::::HL:T:M:::::::T: HQ1611A ::::::::EVI::::::::::::::::G:::::::::GEGMGN:A:A::::::::::::: HVO_0907 ::::::::DVI:::::::::::::::::::::::::AGAGSGN:V:A::::::::::::: Hbo0636 ::::::::DVI:::::::::::::::::::::::::AGVGNGN:V:A::::::::::::: rrnAC1278 ::::::::M:E::R::::::::::::::::::::::::::::::A::::::::::::::: Hmu1697 ::::::::E:E:::::::::::::::::::::::::A:::::::A::::::::::::::: Hmu0914 ::::::::WL::PA:::::::::::::G::::P::::::::::G:GL:F:FL::::::A: Hbo0131 GPRIEFLYALE:PT::::::::::::PG::L:V:QAI:::::QLT::Q:::L:::::::: consensus VSATMGAINFIATIFTERGEDVSWANLDIFSWTMLTQSGLILFAFPLLGSALLMLLLDRN #oth 21122111.2.2..13.152614.221..2..23.111122.....21..123...1..1 rrnAC0880 IAT:V::::::T::VY::::G:::::::::::N::VT::IA:::::::::::V::::::: NP2456A ::::::::::::::::::SD::T::::::::::I:::::I:::::::::::::::::::: VNG0657 ::::::::::::::::::::::G:PD:::::::::::::::::::::F::::I::::::: Hmu1896 :::::::::::::::::Q:::ID::::::::::V:V:::Q::::::::::::V::::::: Hut0727 :::::::::::V:::::::D:::::::::::::::::::I::::::::::::I::::::: HQ1611A ::::::S::::::::::::KN::::::::::::I:::::::::::::::::IM:::F::: HVO_0907 ::::::::::::::::::D:K::::::::::::V:::::::::::::::::I:::::::: Hbo0636 :::::::::::::::S::A:E:T::::::::::V:::::::::::::::::::::::::: rrnAC1278 :A::::::::::::::::N:E:N::::::::::I::::A::::::::::::IV::::::: Hmu1697 :A:::::::::::::::::DG:N::::::::::V:::::::::::::::::MI::::::: Hmu0914 ::TILS:V:L:V::VM::-:S:T::T:::Y::S:::TA::V:::::V:::T::::::::H Hbo0131 LATV:::V:I:V::::::::R:G:S:M::L::SL::T::I::::::I::::::::::::: consensus FGTAFFAT-EGGGPILWQHLFWFFGHPEVYILVLPPMGLVSYILPKFSGRKLFGFKFVVY #oth 31.5..35143.22211......1......112..22.13.411.1.3..1...1211.. rrnAC0880 L::::::::::::A:::::::::W::::::::F::AT::M:L:::::V::::::YQ:I:: NP2456A :::L:::::::::::::::::::::::::::::::M:::::W:::::A:::::::::::: VNG0657 :::T::TV:A::D::F::::::::::::::V:::::::I::L:::::::::::::::::: Hmu1896 M::::::IG::::TL::::::::::::::::::::::::I:::::::C:::::::::::: Hut0727 L::L:::V:D::N::::::::::::::::::::::::::I:::I:R:::::::::::::: HQ1611A :::S:::G::-::A:::::::::::::::::I::::::II:::::R::::R::::::::: HVO_0907 :::M::SV:D-::A::::::::::::::::::::::::I::LV::R:A::R::::::::: Hbo0636 ::::::V-:N::D:::::::::::::::::::::::::I:::V::R::::R::::::::: rrnAC1278 LA:T:::V::::::L::::::::::::::::::::::::::L:::::::::::::::::: Hmu1697 LA:T:::::GN::TM::::::::::::::::::::::::::::::::::::::::::::: Hmu0914 V::V:::::D::::::F:::::::::::::::I::A:::I:H:::R:A::R::::RY::: Hbo0131 :::::::L::A::::::::::::::::::::::::AF::T:Q:::::A::R::::::I:: consensus STLAIGVLSFGVWAHHMFATGIDPRLRASFMAVSLAIAIPSAVKTFNWITTMWNGNIRLT #oth ...11.............3113...2231..12111.11...1.1...11.1.1.32..1 rrnAC0880 :::GL:::::::::::::T:SA:::VKL::::::I:::V:::I:V::::::::E:::::: NP2456A ::::::::::::::::::GS:::::I::::::T::::::::::::::::::L:::::::: VNG0657 ::::::::::::::::::T::::::I:S:::::::::S::::::V::::::::::KL::: Hmu1896 ::::L::::::::::::::::M:::::GA:::ITIS::::::::::::MA:::::RL::: Hut0727 :::::::::::::::::::::::::::::::::::::::::::::::::::::::R:::: HQ1611A :::::::::::::::::::::L::::::::::::::::V::::::::::::::::::::: HVO_0907 :::::::::::::::::::::::::::::::::::::::::::::::::::::::K:::: Hbo0636 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1278 ::::::::::::::::::S::M:::::::::::::::::::::::::::::::::RL::: Hmu1697 ::::::::::::::::::S::M:::::::::::::::::::::::::::::::::QL::: Hmu0914 ::::::::::::::::::T:::::::Q:::::::::::V::::::::::::L:::RV::: Hbo0131 :::::::::::::::::::::M:::::::::VIT::::V:::::::::MA:L::::V::E consensus APMLFCIGFVANFIIGGVTGVFLASIPVDLVLHDTYYVVGHFHYIVMGAIAFAGFAGIYY #oth 1.1222312132.12..2..1.1.21.1112113.12..1...2222.4.31241113.. rrnAC0880 ::FML:A:GIGT::::::::::::V::::ILY:G:::::::::L::V:I:P:LMI:AS:: NP2456A ::::::L::::::V:::I:::::::V::N:L::E::::::::::::::M::::::GA::: VNG0657 ::::::::::Q:::::::::::::V::I::I::::::::::::F::Y:::G::L::AS:: Hmu1896 ::F:::V::I:::V:::M::::E:A:::::L:::::Q::A::::VI::G::::V:::::: Hut0727 T::::::::::::::::::::::::::I::I:T:::::::::::VI:::::::V:::V:: HQ1611A T::::SV:::::::L::::::::::::::::::A:::::::::::::::::::::::::: HVO_0907 T:::::::::S:::L::::::::::::::::::::::::::::::::::::::::::L:: Hbo0636 T:::Y:::::S::::::::::::::::::II:::::::::::::::::::T::::::::: rrnAC1278 T:::::::::S:::::::::::::::::::I:::::::::::::::::::G::A:::::: Hmu1697 T:::::::::S:::::::::::::::::::::::::::::::::::::::G::V:::::: Hmu0914 ::::::LAA:SL:VL::::::::::::::::::G:AF::::::LLLV:T:TT:L::AS:: Hbo0131 :::Q:LL:GI:L::V:::::I::::::::::::G:::::A:::F::V:I:::SM::AS:: consensus WFPIYTGRMYQRTLAKAHFWLSMIGTNVTFFAMLLLGYLGMPRRYATY--------LPQF #oth .1.232..1.24211341122343.2331.321242.3411...412.322433212443 rrnAC0880 :Y:LI:::W:DTRM:RFQAL:IVF:SF:::MTL:VI:G::L:::QTI:::::::::P:EY NP2456A ::::V:::::N:R::::::::::::S:I::::::IA:::E::::::::EFDPNLAP:TEV VNG0657 :::MV::::::KR::H::::TALV:S:A::L:::W:::G:::::::::::::::::I::: Hmu1896 ::::::::W::::::::::::T:::::I:::P:I::::A:::::::::::DVAVGPIDL: Hut0727 ::::::::::::::G:W::::T:::::::::::I::::V:L:::L::::NAITVGPIDVI HQ1611A :::L::::::::::G:M::::::::::I:::::I::::G::::::::::::::::::::: HVO_0907 :::::::::::V::G:W::::::V:::L:::::I::::G::::::::::::::::::::: Hbo0636 ::::::::::::::G::::::::::::::::::I::::G::::::::::::::::::::: rrnAC1278 ::::F:::::::::G:::::F::V:::I::::::A:::::::::::::QFDGAIAP:T:V Hmu1697 ::::VS:::::K::G:::::::::::::::::::A:::::::::::::NFDGAIAP:A:V Hmu0914 :::LIV::W:DPG::R:::::TAV::VLA:CPL:VA:A::L:::M:::::::::::PAD: Hbo0131 :Y:LF:::::NKR::TI:AV::IG:VI::::PLFI::LM:L:::S:Q:::::::::PV:: consensus TTLHQIATVGALILLVGQLIFVWNVVQSWLEGPKVED-GDPWDLKEDGLFTREWQWFEQK #oth 4341232.1.2311441333124.3241335.35133141.1324553365311513565 rrnAC0880 QLAQ::::::GY:IGLSA:LWLY:MLV:YWR:TP:TT:T:::G::ATSQ::::::::::H NP2456A :L:::AM::::V:IA::T:LWFV:::W::KK:TE:T::P:::NT::Y::HG::FA::::Q VNG0657 A:A:RL:::::FLIG:ST::WLF:MAT::R:::R:DS:T:::::E:TDQ::ND:A::RA: Hmu1896 :L::::::L:VVL:V::::L:L::::T::::::R:TS:N:::N:DR::MRA::FE::ASE Hut0727 :L:::A::::::::F::::V::::IL::::D:::LT:::::::::D:::::::FA:N:DR HQ1611A A:::::T:L::::::A::I:::::FA::::::::::::::::::HDN::Y:A::E:YD:: HVO_0907 A::::V::::::::::::M:::::F:::::::R:::::::::::AA:D:T:A::T:::R: Hbo0636 I:M:::::L:::::::::I:::::F:::::::::::::::::N:::E::Y:A::::YDR: rrnAC1278 S:F::A:::::F::FI:::F::::I:::::::::::::::::::ES::MLD::F:::DEQ Hmu1697 ::F::L:::::F::::::::::::::T:::::RR::S:H:::N:E:NDMLGN:FS::KEQ Hmu0914 AVW:T::::::Y:IAT:::LWLL:::TAVRN:EL::NCPV:RSID------H::R----- Hbo0131 :S:Q:::::::F::AISVG:WLF:M:N:FRA::V:R::P::::::ST:Q:S:::::::DR consensus LET------ALADGGEE------DP---DLLADGGQ------------------------ #oth 675322222353133444533323511155732136465522333322211111111111 rrnAC0880 MMDKYDMEPTEPETTRRSYAPEAE::::TG::G:VGTVAQTVSRNAWMAAVGGFVGTVLM NP2456A :AA::::::--T:::D:::::::--:::E:AT:::EP::::::::::::::::::::::: VNG0657 E::T:::::V:P:::D:AQS:::EA::::AVT::::PAAD:::::::::::::::::::: Hmu1896 RLP::::::::T:::S:SEVSGASS:::E:RS:::SESEVSGASSELRS::::::::::: Hut0727 IT-::::::--::ET:A:::::::A:::::W::::E:::::::::::::::::::::::: HQ1611A :T::::::::I::::D:ET::::EE:::KV:T:::DVNSD:::::::::::::::::::: HVO_0907 ::::::::::VT::::D::::::ET:::E:AT::::TVDD:::::::::::::::::::: Hbo0636 VK:::::::::::::H:::::::--:::--------:::::::::::::::::::::::: rrnAC1278 ::-::::::--:EAP:K:::::::::::S:::::::::EE:::::::::::::::::::: Hmu1697 R:::::::::::::::::::::::E:::SVM:::::PGQQ:::::::::::::::::::: Hmu0914 ---::::::TRD:TSRD::::::--:::--------:::::::::::::::::::::::: Hbo0131 MSRDLARPRV:::::R:VVAVAD::SAD:SP:::PPEDDPSVDGPS:::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 rrnAC0880 SGGLITAILIGVLVPVSFGEIAELVGLPANPAIGAVLFLVGGTVTWPLLFLAFSDYLPGR NP2456A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG0657 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1896 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut0727 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1611A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0907 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0636 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1278 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1697 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0914 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0131 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus --------------------------------------------------------SDEE #oth 111111111111111111111111111111111111111111111111111111114166 rrnAC0880 LLFETGLVFATLISSGFAIAFYTGQSGLTFIGYLTFVLVSHWAYGIGLTVTFQYLK:::T NP2456A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::A::A VNG0657 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::T: Hmu1896 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::E:G: Hut0727 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::T HQ1611A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::A:AD HVO_0907 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::A:AD Hbo0636 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::S: rrnAC1278 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::Q:DS Hmu1697 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::R Hmu0914 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::---- Hbo0131 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::A:DS consensus S-------------- #oth 644444423221211 rrnAC0880 LRSRGGGGS:::::: NP2456A Q:::::::::::::: VNG0657 ::::::::::::::: Hmu1896 DRPTDGD:::::::: Hut0727 Q:::::::::::::: HQ1611A :DNDSTVDTHSEE:: HVO_0907 ANSADDA:::::::: Hbo0636 :DS:::::::::::: rrnAC1278 -:::::::::::::: Hmu1697 -:::::::::::::: Hmu0914 -:::::::::::::: Hbo0131 PADAHPADDVTETDE