| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3820 | HVO_2580 | Hbo2272 | HQ3217A | Hut2283 | NP2416A | VNG1883 | rrnAC3409 | Hmu2378 |
| 2745 | HVO_2580 | 4021 | 2680 | 2391 | 2244 | 2329 | 2423 | 2256 | 2257 |
| 2951 | Hbo2272 | 2680 | 3934 | 2764 | 2305 | 2452 | 2517 | 2387 | 2399 |
| 2663 | HQ3217A | 2391 | 2764 | 3835 | 2089 | 2250 | 2300 | 2120 | 2168 |
| 2850 | Hut2283 | 2244 | 2305 | 2089 | 4631 | 2444 | 2449 | 2614 | 2682 |
| 2949 | NP2416A | 2329 | 2452 | 2250 | 2444 | 3750 | 2577 | 2541 | 2611 |
| 3024 | VNG1883 | 2423 | 2517 | 2300 | 2449 | 2577 | 3841 | 2475 | 2563 |
| 2939 | rrnAC3409 | 2256 | 2387 | 2120 | 2614 | 2541 | 2475 | 3934 | 2984 |
| 3020 | Hmu2378 | 2257 | 2399 | 2168 | 2682 | 2611 | 2563 | 2984 | 4139 |
705 symbols consensus --------MTDARTTDVLVVGSGIAGCAAALAAARE------------------------ #oth 11111123353454111.12.1....11...11..4111111111111111111111111 HVO_2580 ::::::::----MKA::::::::::::::::::::::::::::::::::::::::::::: Hbo2272 MSESTTETGA:::E:::::::::::::::::::::S:::::::::::::::::::::::: HQ3217A :::::::::SFSNQ:::::I:::::::::::T:::N:::::::::::::::::::::::: Hut2283 ::::::::::E:ES:E::I::G::::::::::::::VEQGESSNRASGETVSREVDQRET NP2416A :::::::MTGEP:E:EL:::::::::::::::G::A:::::::::::::::::::::::: VNG1883 ::::::::::::T::::::L:::::::G:::::::::::::::::::::::::::::::: rrnAC3409 :::::::MTD:PI::::::I::::::L::::::::::::::::::::::::::::::::: Hmu2378 ::::::MSG::HE:::::::::::::L::::::::Q:::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 HVO_2580 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2272 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3217A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2283 SERASGETVSREVDQRETSERASGETVSREVDQRETSERASGETVSREVDQRETSERASG NP2416A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG1883 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC3409 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2378 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -----------------------GASVLVATKATRPEDASSDWAQGGIAVTRDDPEQFKR #oth 11111111111111111111111123.311...23.221212.......22243113125 HVO_2580 :::::::::::::::::::::::::D:::V::::E::::A:::::::::::QSA::E:AA Hbo2272 :::::::::::::::::::::::::N::::::::A:::::T::::::::::GE:::T:RE HQ3217A :::::::::::::::::::::::::::T:V::::E:S:::T::::::::::GN:::S:RK Hut2283 ETVSREVDQRETSERASGETARSD:E:IL::::R::::::TW:::::::IS::::K:::Q NP2416A :::::::::::::::::::::::::::TL::::::::EST:Y::::::::S:G:A::::: VNG1883 :::::::::::::::::::::::::::::::::QQ:A:::T::::::::T::::::SL:: rrnAC3409 ::::::::::::::::::::::::DD:TL::::::::GS::W:::::::IS::T::E::D Hmu2378 ::::::::::::::::::::::::EN:V:::::::::G:::W::::::::A::H:::::Q consensus DIIAASDGTADPEAVDVLVENAREAVEDVLVETLGVPFD-A------------------- #oth .133.1112.112.113..331321.2.1.22.1313..432232222222111111111 HVO_2580 ::RR:::::::::::ET::SES:AV:::::LD::::A::AVGEGTDADAEA::::::::: Hbo2272 :VLD::::::::::::I::GD::D:::::::D:I:::::G:::::::::::::::::::: HQ3217A :::E::A:E:Q:::::A::N:::DV:D:I:IN::EI:::G:::::::::::::::::::: Hut2283 :::D::A:::::::A:::::::N:::R:::::::S::::T:DGSDDA::::::::::::: NP2416A ::::::::L::ET:::::::S:D:::::::::::::D:::-::::::::::::::::::: VNG1883 ::L::G::E:::::::A::GD:AA:::::::D::::::::-::::::::::::::::::: rrnAC3409 ::M:::::::::D:::::::::N:::::::L:::D:E:::-::::::::::::::::::: Hmu2378 ::L::::N::::D:::::::::N:::R:::::::D:E::VEGEDDQRESSERANGEERPV consensus ---A-AGDDGFDFGREAAHSERRILHVDASTGKHILRPFLNHLDDHDGVEILDDAAALDL #oth 115345343421421..1.123.....112..512141.14324223313322.12..11 HVO_2580 ::S:DTDTNS::LA:::G::S:::::::::::A:V:::::Q::SAR:::R:VE::T:::: Hbo2272 ::P:G::L:DY:H::::::::::::::N::::G:V::::::::R:::::TF:E::M:::F HQ3217A ::TPT:PL:AY:R:::::::::::::::TT::E:::::::AQ:KSDNRI:FV:::M::E: Hut2283 ::V:ER:GED::::K::::DAD::::::::::SYV:ER::AFV:::PDIRV:::T::::: NP2416A :::-:-::::HEYA:::::::P:::::::A::::L:G::MS::ES::D::::A:T:::E: VNG1883 :::-:-:EE:::YA::::::AA:::::::A::H:::G:::R:::A:EN:DM:E::::::: rrnAC3409 :::-:QNGS:H::T:::::::D:::::::::::::HV::::YI:::::::::::T:::E: Hmu2378 SENDGD::EE:::::::::::D:::::::A:::::HI::::Y::::EN::MR::T::::: consensus ITHEGRVHGAMLERDGEVE-------PVFAGATVLATGGIGDCYGRSTNPAGATGDGIAM #oth 213..3.2.151233223611111111221.111.....1.111531...5221...11. HVO_2580 L:E::T:R::TVLA::::::::::::::::::::::::::::::A::::::::::::V:: Hbo2272 L::::::::VH:L:E:S::::::::::::::::::::::::A:::TT:::D::::::V:: HQ3217A L::::::::VSVL::DS:T:::::::S::G:::I:::::::A::ET::::G::::::::: Hut2283 :::::E:R::Y::SS:::R::::::::::::::::::::V::L:PD::::::S::::::: NP2416A V:A::::::::::QN::WA::::::::CL::::::::::V:A::::T:::PT:A:::V:: VNG1883 ::D::A:T::L:D:NPRTGDRAETGV:::::S::::::::::L:R:::::R:S::::V:: rrnAC3409 :R:::::::::::S::::D::::::::Y:::SV:::::::::L:P:T:::DNT:::::G: Hmu2378 :R:::::::::::S:::YS:::::::::Y:::::::::::::LFTH::::T:S::::::: consensus AALAGADVADMEYVQFHPTAYA-E----------------GDD--PFLVSEAVRGEGALL #oth ..1...323.111.......345332122111111111111432231.2........12. HVO_2580 ::::::T:S::Q:::::::::DPRTDPRA:::::::::::D::AQ:::::::::::::V: Hbo2272 ::F:::RI:::Q:::::::::P:-::::::::::::::::::::::::::::::::::V: HQ3217A ::::::RI:::Q:::::::::P:-:::::::::::::::::PE:::::::::::::::V: Hut2283 ::::::::::::F:::::::HVD:S::::::::::::::::--::TL:I:::::::::T: NP2416A :::::::T::::::::::::F:G:D::::::::::::::::::RGT::L::::::::::: VNG1883 ::::::::T:A::::::::::D:-::::::::::::::::DA:::::::::::::::::: rrnAC3409 ::::::E:E:::::::::::CTLDSEPPRGSDGGGGTAGA::V::A:::::::::::G:: Hmu2378 ::::::::E:::F:::::::::A:D::::::::::::::::E:::G::L::::::::::: consensus RNAD----------------GERFMPDYHEDAELAPRDVVARAVAAERERTGEVRLDVSP #oth .1141111111111111111.2....2214........1...1.331.121.3.4...21 HVO_2580 :D:::::::::::::::::::R:::::V:D::::::::::::::SRA:D:S:R:V::::D Hbo2272 ::GE::::::::::::::::::::::GV:D::::::::::::::KD::D::::::::::: HQ3217A :::T:::::::::::::::::D:::::I:P::::::::I:::G:::::::::::::::T: Hut2283 :::Y::::::::::::::::::::::A:D:::::::::::::::KN:::VS:::F::::D NP2416A ::::::::::::::::::::::::::::::::::::::::::::R:::::::G:S:::G: VNG1883 ::::::::::::::::::::::::::::::::::::::::::::::::DA:::::::::: rrnAC3409 ::GK:::::::::::::::::::::::::A::::::::::::::K::::A::::T::::: Hmu2378 ::G:VSESSDSEARETESPG:::::::::T:::::::::::::::::::A::T:V::::: consensus L--DFEEEFPGLAEACDDRGVDWEAGIPVAPAEHFLCGGVAVDDRGRTSLDRLYAVGECA #oth 2211.352..2.234.52121.324....1.21.1....11.124.211.12.1.1...1 HVO_2580 :::::RD:::D::AL:::::::LD:::::::S:::::::::::::::A::P::F:A:::: Hbo2272 VEP::RT:::D:::L::E:D::P:D:::::::::Y::::I:::E::::T::::F:A:::: HQ3217A VDP::NRA::::TSR:N::KI:L:L:::::::::Y:::::::NTD:E:T::::::A:::: Hut2283 I::::::R::D:V:Q:ER::I:::T::::R::Q::::::::::EW::::::G:::::::: NP2416A V:::::A::::::S::R:::::I::::::::::::::::::::TE::::::Q:::::::: VNG1883 :::A:A::::::::::A:::::::T::::::C:::::::::::TV::::::::F:::::: rrnAC3409 :::::A::::N::DR:KEH:I::TD::::::::::::::IN:::::::T::::::::::S Hmu2378 ::::::S:::::V:K:E::::::TE:::::::::::::::::::::Q::::::::::::: consensus RTGVHGANRLASTSLLEGLVWGLRAGEDAA--GAD--PEPIEAPELLDRDPALPDSFARE #oth 1.....................21..33.123.4113235314331211..3..25.144 HVO_2580 ::::::::::::::::::::::V::::T::DR:R::EA:TV:YAPPR:S::::::A::DA Hbo2272 :::::::::::::::::::::::::::T::DA::::AA:R::TQ:P::S::E:::E::SA HQ3217A ::::::::::::::::::::::RA::QQ::QV:I::DITS::TSSP::::::::S::VDG Hut2283 H:::::::::::::::::::::::::A::T:::R::::A:MDV:D:D::::::::::::: NP2416A :::::::::::::::::::::::::::A:::::NE:::VAV:V:::R:S::S::::::E: VNG1883 :::::::::::::::::::::::::::T:::::D:RA:A:S:P:::R::::D:::G::A: rrnAC3409 ::::::::::::::::::::::::::G::::::::::::::::::::E:::D::ER:::D Hmu2378 ::::::::::::::::::::::::::A::::::NE::A:V::::D::E:::D::ED:::Q consensus KFRRLRRVMDEYVGIERTPADLDRARGVLRRLKGEVDAYVRTRTSRSLYELRNASVCALL #oth .16..2211334..21.1322.43.4221......2.1.3...1.111.1..1.3142.. HVO_2580 ::D::G:T:::L:::::::DG::T::AR:::::::::::A:::V:::V::::::C:SS:: Hbo2272 :YA:::ET::SA::V:::H:::EQ::STI::::::::::T:::V::::::::::T::::: HQ3217A :Y::::NT:ETA::::::D:G:SE::ST:::::::A:::T:::V:Q::::::::TI:G:: Hut2283 ::T::::::G:::::::D:DE:E::L::::::::::::::::::::::::::::::V::: NP2416A ::I:::::::D::::::::S:::::A:::::::::I:::I::::::::::::::CIA::: VNG1883 :::::::::::H::LR::G:::Q::Q:::::::::::S:A::::::D::Q::::A:VG:: rrnAC3409 ::Q::T:::A:N::V::D::::Q::MA:::::::::::::::::::::::::H:::T::: Hmu2378 ::H:::::TE::::L::D::::N::L::::::::::::::::::::::::::::::T::: consensus IARAAAENPESAGCHHLVDDDAAEEAPEATAAD------------ #oth 11.1.42122.2.1.431452344554355642211111111111 HVO_2580 V:::::DA:-:::::S:::P:GRDGGDGSDGS:DAGRGVTPSADD Hbo2272 V::::S:A:-::::::V::A::EGS:NGGAR::D::::::::::: HQ3217A :T:::S:A:-:::::QI::TKT::STVGE:I::D::::::::::: Hut2283 ::::::A:D::V:T:N::S::GTSTDD:::VETP::::::::::: NP2416A :T:::R::ET:R::::::EEA::DAD-------:::::::::::: VNG1883 :::::G::::::::::RS:EA::::::D:GH--:::::::::::: rrnAC3409 :::H::::E::V:T:N::--::S::P::S::D-:::::::::::: Hmu2378 VT:H:L::D::V:T:YV:T::E:AQQ::TQ:D:::::::::::::