|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1918 | VNG0883 | NP3476A | rrnAC2246 | Hmu0053 | rrnAC0462 | Hmu1135 | hla2442 | HQ2658A | HVO_1567 | Hbo3479 |
1087 | VNG0883 | 2054 | 675 | 918 | 932 | 880 | 879 | 893 | 737 | 818 | 795 |
1123 | NP3476A | 675 | 1839 | 930 | 960 | 980 | 962 | 833 | 883 | 959 | 915 |
1388 | rrnAC2246 | 918 | 930 | 1981 | 1493 | 1345 | 1233 | 947 | 883 | 1039 | 986 |
1393 | Hmu0053 | 932 | 960 | 1493 | 1974 | 1278 | 1135 | 910 | 852 | 1068 | 1011 |
1418 | rrnAC0462 | 880 | 980 | 1345 | 1278 | 1963 | 1431 | 1050 | 921 | 1067 | 1040 |
1335 | Hmu1135 | 879 | 962 | 1233 | 1135 | 1431 | 1980 | 1003 | 912 | 976 | 1055 |
1243 | hla2442 | 893 | 833 | 947 | 910 | 1050 | 1003 | 2172 | 1025 | 1121 | 1132 |
1170 | HQ2658A | 737 | 883 | 883 | 852 | 921 | 912 | 1025 | 1837 | 1239 | 1207 |
1353 | HVO_1567 | 818 | 959 | 1039 | 1068 | 1067 | 976 | 1121 | 1239 | 1845 | 1296 |
1350 | Hbo3479 | 795 | 915 | 986 | 1011 | 1040 | 1055 | 1132 | 1207 | 1296 | 1831 |
309 symbols consensus ----------------------------------MTVRHDGLTVDWLGYATLRIESEDG- #oth 111111111111111111111111111111111111154333333......4.3245314 VNG0883 :::::::::::::::::::::::::::::::::::::TAA:V:::::::::T:::WA::T NP3476A ::::::::::::::::::::::::::::::::::-M:E:E:V::S:::::::::DDGET: rrnAC2246 :::::::::::::::::::::::::::::::::::::::::::::::::::::FAGD:T: Hmu0053 ::::::::::::::::::::::::::::::::::::::::::A:E::::::I:LAG:ET: rrnAC0462 :::::::::::::::::::::::::::::::::::::::::I:AE::::::::L:G::T: Hmu1135 :::::::::::::::::::::::::::::::::::::HFEDI:L:::::::::V::D:T: hla2442 MTPTHWSASCASPGMRSDTEPIATLKNIAAEYLC::::Y:DFS:E::::::A:L:P:G:P HQ2658A ::::::::::::::::::::::::::::::::::::::IES:SIS::::::V::::V::F HVO_1567 ::::::::::::::::::::::::::::::::::::IK::::D:S::::::V::::P::F Hbo3479 :::::::::::::::::::::::::::::::::::::SFRN:D:A::::::V:::::A:Y consensus VVYFDPGRYGVLTGEW-P--------HPP-DDYRARDGDLVCVTHNHHYDPDGIRRVASE #oth 13.4........11112131135233111343.425...21211.5....121.32..42 VNG0883 :A:T::::::::::::T:GGFEGAHE:::GAE:::Q:::::VI::A:::::H::A::::A NP3476A :::V::::::::----:-::::::::---::G:DGG:::V:::S:G::::SAA:EQ::GD rrnAC2246 :::V::::::::::::E:H::TDGIG:::SS:::PE:::I:::::V::::::::E::::: Hmu0053 ::::::::::::::::E:D::EAGLN:::GR:::PE:::VI::S:V::::::::E::::A rrnAC0462 ::::::::::::::::E:D::TPGIG:::TQ::APK:::I:::::I:::::::::::::: Hmu1135 TI::::::::::::::E:H::VEGIN:::TQ::D:::::V:L:::I:::::::::::::D hla2442 :A:T::::::::----:-::::::::---::::W:::::I:V:::D:::::::::S::R: HQ2658A :T:I::::::::----:-::::::::---::N:Y:H:::::V::::::::S:A:NQ::D: HVO_1567 ::::::::::::----:-::::::::---::::Y::::::IL::::::::S:A:EQ::DA Hbo3479 :::L::::::::----:-::::::::---::::Y:::::::::::D::::S:A::S::K: consensus DATVVAFEGIDAAAIDRDVAPVADL--DYDVRRVDAEAHLTV----GDVDIWSTPAYNDP #oth 2..2.41111255732.1153344.112232231343455511111332422232.3132 VNG0883 :::::VYDA::::TTS:::T::DA::::::::::EYG:RQRA::::AG:ALTV:E:QTA: NP3476A G::L:Y::::NTHH::::::RP:S:::SLST:T:::::DIA:::::::AI:RT:A::::: rrnAC2246 :::I::Y::::ERVG:::LP:LSS:::P:::VE:GMKSQT::::::E::P::::::::E: Hmu0053 :::::::::::GQDRE:GL::ITE:::P:EL:T:::TTN:::::::DG:SV:::::H:E: rrnAC0462 ::::::::::NVH:T:::LDRL:::::::E::K:SM::DVL:::::D::P::TM::::HE Hmu1135 :::I:L:::::VH:T:::LDRP::::::FE:VE:GM:DE:VA::::A:CP::TV::::EE hla2442 :::L:IYDAV:S:G:::::ESIDS:AD::::I:::D::RVD:ATPA:E:AV::VA::::: HQ2658A T::I::::::RTEQ:::::TA:SN:::S::TI:I:::S:CV::::::P:::::L:::::: HVO_1567 :::::::::V:::T:::::V::E::::P:GTV:::E:::::::::::E::V::L::F::: Hbo3479 :::::V:::V::SN::::::A:E::::P:E:I::GE:E:::A:::::P::L:TLA:::EA consensus DGPHTRPDGSPIHPPGFGCGFLLSIGGTRVFWPGDSDVLPGHEELDVDLFLANI-GGRYT #oth 11134532.333..4.4...142534253211..11.1141156231121212.124451 VNG0883 :E:----G:TSL::::V:::YT:TR:D:T:::::A::A:AS:DAI:C:VL::P::SR:I: NP3476A ::::V::A:E:Y::K:R::::HITL::VS:Y::::T:::E:::H::::V:CPP::::::: rrnAC2246 ::R::L:::T:Y::E::::::MIAVE:::A:Y::::::::::RT:E:S:LCPP:::P:A: Hmu0053 :::::::::T:Y::E:::::::VDVE:::A:::::T::::::RSV::S::CPP:::Q:F: rrnAC0462 ::RNLKD:::::::K:I:::::VA:DD::::::::T:::D::A::::S::VPS::AKN:: Hmu1135 :::NVDD::T::::R:I:::::VE:::E::::::::::::::::::::V:VPS::AKH:: hla2442 E::NAG::::V::::::::::::GL:DRT::::::::AFD:FA::::SI:::::G::GLV HQ2658A :::TADA:::VV::R:L:::YR:::NNLSI:::::::::T:FQR:P::V::::::::SVV HVO_1567 ::::L:-::DVV::Q::::::HI::ADRT::::::::::E::KH:E:S:::::::::SVV Hbo3479 ::::::D:::LV::::::::::::VD:IK::::::::::A:F:Q:S:::::::::::SIV consensus MDRHEAADLAAALDPDLVLPIHYNTFELLEADSRAFAADVAARGVPVVLDEP-------- #oth 12122..3.13324.5223.2..1.236132.442.1621163221.1114466533111 VNG0883 :GET::::::DR:::A:AV::::::V:R:TG:G:R::CA::SS::::A:::QASTARPSQ NP3476A ::::::::::V::A:EI:::V::D::DEI:::AA:::DELES:::D::IEP:TW:::::: rrnAC2246 :::::::S:::TI:::::M:V:::::SN::::::E::::::EA::::::::Q:::::::: Hmu0053 :::R:::R:::TIE:N::M:V:::::ST:AT:::::::::::A::::::::Q:::::::: rrnAC0462 :N::::::::E:M:::::::M::::::::::::G:::E:::K:::::::::N:::::::: Hmu1135 ::::T::::::EMR::C:V::::::::S::G:DE:::V:::G:::::A::H-:::::::: hla2442 S:::A::E::E:M:::::V::::D:::Q::::GE:::G:::::SI::A::ARSANQ:::: HQ2658A :N::A::S:T:::::Q:TI::::::ID::ST:AD::VI:::QQNC:::IED:NERPA::: HVO_1567 :::R::::::ET:::::::::::D:IP:::T:PD::VV:::N::I:::::D:DQV::::: Hbo3479 :::::::::::::N:G:::::::::ID::S::PE:::::::::::::::ED:EDHAV::: consensus --------- #oth 111111111 VNG0883 RGARGGRCP NP3476A ::::::::: rrnAC2246 ::::::::: Hmu0053 ::::::::: rrnAC0462 ::::::::: Hmu1135 ::::::::: hla2442 ::::::::: HQ2658A ::::::::: HVO_1567 ::::::::: Hbo3479 :::::::::