|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1943 | HQ1170A | VNG0291 | hla2658 | Hmu0655 | HVO_0771 | Hbo0760 | NP1136A | rrnAC1810 |
1143 | HQ1170A | 2073 | 786 | 822 | 950 | 956 | 1093 | 943 | 879 |
1205 | VNG0291 | 786 | 1987 | 955 | 911 | 977 | 962 | 973 | 904 |
1207 | hla2658 | 822 | 955 | 2181 | 937 | 983 | 1005 | 952 | 900 |
1372 | Hmu0655 | 950 | 911 | 937 | 1973 | 1107 | 1047 | 1111 | 1126 |
1471 | HVO_0771 | 956 | 977 | 983 | 1107 | 1975 | 1287 | 1054 | 1166 |
1409 | Hbo0760 | 1093 | 962 | 1005 | 1047 | 1287 | 1967 | 1091 | 1174 |
1288 | NP1136A | 943 | 973 | 952 | 1111 | 1054 | 1091 | 1995 | 1137 |
1378 | rrnAC1810 | 879 | 904 | 900 | 1126 | 1166 | 1174 | 1137 | 1988 |
309 symbols consensus ---MDIERIP--VAVATRAPTGATNAYLV------------GREAALLVDPAARTDRLDA #oth 112346425322.422111.3.5.1..2411111111111223543311..223443215 HQ1170A ::MTRVR::::::G:DSQV:::K::::VIITSNEEYQGDTGS:PE:I::::P:QAPEI:M VNG0291 :::-M:::Y::::DG:::::H:T::::::::::::::::::DGQ:RV:::::G::AA::: hla2658 MATP:LRSSVTR:::D::::G:T:::::A:::::::::::::G---A::::::::ET::: Hmu0655 :::--M:::S:::P::::::S:Q::::VL::::::::::::::DR:AVI::C::HE:V:D HVO_0771 ::::HAT:VSVL::T:::::::::::::::::::::::::A:GGDT:::::::::::::D Hbo0760 :::---VTL:TR:S:P::::::::::::::::::::::::::T:R:::::::G:::E::E NP1136A ::::H:::L::::::P::::S:E:A::CI:::::::::::::::E::::::P:PDT:IEQ rrnAC1810 :::::WH:AD:::S:P::::::S:A::VC:::::::::::::D::::::::PDAG:A::S consensus AVARRG----------VDHIAVTHHHPDHVGAVAAYAAETDATVWARRGREARFEAATGV #oth 2136541111111111131221..2.1..211.24..2421.1.111322542.432..1 HQ1170A V:DKLT:::::::::::S::L:::T::::::G:SV::DT::::::C:H::VQ::YET::: VNG0291 ::S-::::::::::::::::V:::A::::::::D::::A:::::::HAAFT::::RE::: hla2658 ::GVD:ESGNGTEGGA::A:::::A:::::::::E::DL:::S:F:HADHVD::A::::: Hmu0655 :L:S:S::::::::::LA:VL::::::::::G::D::::H::::::::::::A::::::: HVO_0771 L:::E::::::::::::::L::::T:A::::::::::R::G::::C:::::RA:S::::: Hbo0760 L::ESN:::::::::::E::::::T::::TD:::::::A::::::C::::KR::ID:::I NP1136A VLD:--:::::::::::E:::::::::::::::SE::RIA:::::C:Y::GDG::::::I rrnAC1810 LLSD:S::::::::::LA:::L:::::::A::::H::R::G:::::::::ASA::::::I consensus EPDRTFREGTEIPVGAG-VTVLDTPGHAPDHVAFAAD-----------------DGLLCG #oth 5.122.33.152131525142411....11.1224362212111111111111154322. HQ1170A N::Q::::::IL::DES::QI::L:::::::IGIETK:::::::::::::::::I:I::: VNG0291 A:::V::P:DA:--:DTAL::T:::::::::::VL:TVDGE:::::::::::::CNAIS: hla2658 :::E:::D:DRV--:NTS:RAVE::::::::::::VESRGDGDGDSDAGADGTPSE:::: Hmu0655 T:N:::S:::::::DD:QLR:VE::::::E:::::T:::::::::::::::::::::V:: HVO_0771 D:::::A:::TV:::::::E::::::::R:::S:V:G::::::::::::::::::DV::: Hbo0760 ::::::V::DV::A:H::::::::::::::::::EGN:::::::::::::::::F:VI:: NP1136A R::::::D:::V:A:RSN:I:RE::::::E::::D:A:::::::::::::::::GA:VV: rrnAC1810 T:::L:SG::T::T:::P:::I:::::::E:::::T::::::::::::::::::GAVVS: consensus DLAVAEGSVVVGAPEGDMRAYLVSLRRLHARAPARLYPGHGPVIEDPRETCARLIAHRLD #oth .1141511.212111.3311.241.1.14134143.4.1..141341442161.34..43 HQ1170A :I:R:N:::AITS:D:A::::F:A:::::::Q::C::::::E::SN:::::M::LM::QE VNG0291 ::VF:DS::F:::VD:::::::A:::::A:G:::::Q:::::T::Q:ADRLHA:Y:::R: hla2658 :::IES:::A:A::D::LHE::N::E:VREAGYG:::::::::::::NIV:Q:::D:::: Hmu0655 :::A:T:::A::::::E::::CC::::VI::::G::F::::::VD:AG:::R::L::::: HVO_0771 :::::::::::::::::V:::::A:::::::G:E::R:::::E:T:::A:L:::V:::N: Hbo0760 ::::::::::::::::SI:::::A:::::::D:PT:F:::::N:T::QA::D::VR::IN NP1136A :::::A::::::::::::::::T::::VW:MD:E::::A:::::DE::KV:E:::N::R: rrnAC1810 :::::::T:::::::::V::::A::::::::N:DV:L:::::R::T:::::::::D:::A consensus RERRVLDAVEAGAATVDAILDAAYDKDLTGVRDLARATVVAHLEKLAAEGRI--AWD-EA #oth ..13122115314422331212..1.2243.1...22..31.11..23122111622434 HQ1170A ::KNI:T:ITGN:TS:ET::EQ::::NI:S::::::::::::::::D:D::::::FNR:T VNG0291 :::::::::A::CE::::::::::::::A::::::GQ::R:::D:::R:Q::::D:NGSR hla2658 :::V::A::::::SD:::VV::::E::::::A::::::::::::::V::::VGRE:TDR: Hmu0655 :::::EA::VE:HE:LP::T::::::GVEN:::::E:::A:::::::V:::V::::::-G HVO_0771 :::A:::::R::N::P::VT:::::::VSA::::::::::::I::::::R:V::R::P:: Hbo0760 ::::I::T:TD::SD:ESV:::::::::S:::::::::::::I::::::::V::HY:R:: NP1136A ::::::A:::D:SR::AS:::T::E:::D::::::GQ::R:::D:::H::H:::T:::-G rrnAC1810 :::::R:::HD::::L:E::E:::E:::::::::::G::LT::::::V::A:::S:::-S consensus ERAAPA--- #oth 443515411 HQ1170A KMVREI::: VNG0291 ATHQ::::: hla2658 DID::GE:: Hmu0655 :::R::SA: HVO_0771 ::VE:R::: Hbo0760 N:VI:V::: NP1136A AH:D::G:: rrnAC1810 :::::NLAE