| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 5692 | VNG0330 | hla2704 | NP1196A | HQ1570A | HVO_0812 | Hbo0721 | rrnAC1795 | Hmu0866 |
| 4620 | VNG0330 | 5650 | 4005 | 4348 | 4143 | 4157 | 4208 | 4014 | 3967 |
| 4601 | hla2704 | 4005 | 5913 | 4186 | 4247 | 4341 | 4353 | 3888 | 3874 |
| 4763 | NP1196A | 4348 | 4186 | 5656 | 4176 | 4232 | 4390 | 4057 | 4038 |
| 4673 | HQ1570A | 4143 | 4247 | 4176 | 5857 | 4350 | 4548 | 3854 | 3813 |
| 4807 | HVO_0812 | 4157 | 4341 | 4232 | 4350 | 5707 | 4636 | 3993 | 3943 |
| 4986 | Hbo0721 | 4208 | 4353 | 4390 | 4548 | 4636 | 5710 | 4136 | 4015 |
| 4461 | rrnAC1795 | 4014 | 3888 | 4057 | 3854 | 3993 | 4136 | 5865 | 4282 |
| 4360 | Hmu0866 | 3967 | 3874 | 4038 | 3813 | 3943 | 4015 | 4282 | 5663 |
819 symbols consensus -----------------MAVLWLDDVRADDLGTVGGKAASLGELTGAGLPVPPGFVVTAG #oth 111111122222222211223..211311.224....1.....123......21.1...4 VNG0330 ::::::::::::::::::::R::E::::::IDS::::G:::::::D:::::::::::::: hla2704 :::::::::::::::::::::::K::D:::V:::::::::::::I::::::::::T:::: NP1196A :::::::MTEDGSGSASKS:::::EI:S::::A::::G:::::M:A:::::::::::::Q HQ1570A ::::::::::::::::::::S:::E::ST:V::::::::::::::D::::::S::::::A HVO_0812 ::::::::::::::::::::V::::::::::DL::::G:::::::::::::::::::::S Hbo0721 ::::::::::::::::::::V::::::::::::::::G:::::::S::::::T::::::: rrnAC1795 MATGTSLIVVEDGTNES:PT::::EIG::::AR:::::::::::::::::::SA:::::D Hmu0866 :::::::::::::::::::LR::::IT:::VDS:::::::::::A::::::::A:::::D consensus TYRSFIEDAGIDEELFEAVDVDHEDSAALAEAAERAHELILETPMPDSVREEILAAY--- #oth ...3.11311.142.132.2..41..5..32.213.42..22.25.32122111421111 VNG0330 :::T:::E::::Q:::D::G::A:::D:::D::A::SD:::N:DF:A:L::D::SS:::: hla2704 :::T:::E:E::::::A:::::P:::V::R::E:T:A:::::::L::D:::::VER:::: NP1196A :::A:::ET:::::::::::::SD::::::::EAA:K::::D:EI:E:::::::E::::: HQ1570A :::E:::T::::K:::NV::::::::T::R::H::::Q::V::::::E:KQD::DS:YSL HVO_0812 :::A::::::::D:::A::E::::::E::QA:H:T::D::M::::::D::::::D::::: Hbo0721 ::::::::::::::::D::::::::::::K::H:::::::M:::V:E::G:::::::::: rrnAC1795 :::::::AT::::P::::::::SD::Q:::::::::Q::::::DT:P::::DL::::::: Hmu0866 :::::VQ:T::EAA:S:T::::TD::Q:::A:::H:Q:::::::V:::::D:L:V:F::: consensus ---------DELGDGD--AFVAVRSSATAEDLPDASFAGQQETFLNVTREDLLDRVKECW #oth 11111111115312332221..............1......1.1..14342.231112.. VNG0330 ::::::::::A:D::A::::::::::::::::::::::::::::::I:::A:::H::R:: hla2704 :::::::::RTM::::DE::::::::::::::::S::::::::::::REQ::IR:::::: NP1196A ::::::::::N:D::E::::::::::::::::::::::::::::::I:::::V::I:H:: HQ1570A NTTESRTDG:TSD:SESDP::::::::::::::::::::::::::::RSDN:V::::::: HVO_0812 :::::::::RSV:E::::::::::::::::::::::::::::::::::E::::::::::: Hbo0721 :::::::::::V:ES:DE:::::::::::::::::::::::::::::QKD::IH:::::: rrnAC1795 :::::::::::M::E:::--:::::::::::::::::::::D:Y:::S:T:::Q:::::: Hmu0866 ::::::::::D::HDV::--:::::::::::::::::::::::::::G:A::::::R::: consensus ASLFTQRAIYYRNEQGFPHDAVDIAVVVQQMVDAEKSGVMFTSHPSTGAPQIIIEAAWGL #oth ....11......1231.4.36.1......4..1.11...1..1...1.433111...... VNG0330 :::::E::::::Q::::D::R:N::::::R:::::::::L:::::::::HEA:V:::::: hla2704 ::::::::::::QQR::::AD::::::::R::::::::::::::::::D:::T::::::: NP1196A :::::::::::::::::E::L::::::::K::A:D:::::::::::::E::::::::::: HQ1570A ::::S::::::::R:::S:SN:::::::::::::::::::::::::S:D::::::::::: HVO_0812 ::::SE:::::::RK:::::K:::::::::::::::::::::R:::::KKE::::::::: Hbo0721 ::::S::::::::RK::::HE::::::::E::::::::::::::::::E:R::::::::: rrnAC1795 ::::::::::::::ND:A::::::::::::::::::::::::::::::G:TA:::::::: Hmu0866 ::::::::::::Q::::S:::::::::::A::::DE:::L:::::::::ERA:V:::::: consensus GEAVVSGAVSPDNYVVDRETGEVEEVTVADKKVMMVKDEETGETVERDVPDDKRNARVLD #oth .......2......221.2333233211.1..222.1142211.1333.3341.631..3 VNG0330 ::::::::::::::::::D:DT:::A::::::::H:::DD:::::S:::::R::TQ:::: hla2704 :::::::T:::::::Y:::R:A:D:::::::::E::::A::::::TLE:D:ER::S:::S NP1196A :::::::S::::::::::SD::ILDT:I:::::K::::::::::::K::E:H::K:Q::: HQ1570A ::::::::::::::T:::::A:TTS:SI:E::M:::::AQ::::::Q::SV:::D::::S HVO_0812 :::::::T::::::::S:::::::TA:I::::T:C:R:::S::::M::::NGR:HE:::T Hbo0721 :::::::S::::::::::DS::::TA::::::::::::S::::::::::E::::S::::: rrnAC1795 ::::::::::::::II::::ETID::::::::::C:RG:D-:::I::S::EE:::E:::S Hmu0866 :::::::::::::::::::S:R:::::::E::::H:R:GD--D::::A::::::EQ:::G consensus DDEIARLVELGERVEDHYGEPQDVEWAIYDGDVYMLQSRPITTISDDE-DGAEANT---- #oth 231244.123.121.3..23...1...12213221.........4135441443253312 VNG0330 :G::SD::TI:::::A::DA::::::::V:::::::::::::::E::T::::V::::::: hla2704 :E:::E:::::K:::::::T:::::::::A::I:::::::::::QE:AGS:R:TD:GESA NP1196A :T::GS:::::::A::::D::::I::::V::E:F:::::::::::E:SDA:ET:E-:::: HQ1570A :::::E::A::KK::S:::::::::::::::S:H:::::::::::::TRP:S:S:QQA:: HVO_0812 :::VS::L::::L:::::EK:::::::V:::E::::::::::::AEGD:::E:TES:::: Hbo0721 E::::::::::::::::::::::::::::ED:::::::::::::::::K:A:TQEAAG:: rrnAC1795 :E::H::L:V:::::E::DT:::::::V:EDE::L:::::::::D:P:GSAGS::EAESQ Hmu0866 TETLDQ:::M:::::::::T::::::::A:DTL:L:::::::::DE--:-:GA:D-:::: consensus ---------------G-----ADGGAMAANDGDVLVRGLGASPGIASGPARIVTKLDHLD #oth 1111111111111341454442443544353333224.1.11..322.61.2.41..3.. VNG0330 :::::::::::::DG::::::---------G::AV:T:::::::V::::::V::S::E:: hla2704 ENIAGKDDVDDDTSD:VAANG:GDRDD:SD:A::::N:::::::VV::AV:::H:::::: NP1196A :::::::::::::::-:::::--------:::E:::Q:::::::VS:::V:::R:::Q:: HQ1570A :::::::::::::SN:EINADSPNSTES:::AEI::::::::::::A:E::V:::::::: HVO_0812 :::::::::::::::-:EGDSSGSSRAT:TGD:::I::::::::::::R::::::::::: Hbo0721 :::::::::::::DG:::::::ES:Q:::KS::M:L::::::::::A:N::::::::::: rrnAC1795 :::::::::::::PP:AKSGV::::::ESQSEA:RLS:I:SA::RVT:VV:::D:::N:: Hmu0866 ::::::::::::::::TDAGV::::::TGQQDG:::S:::::::QVA:SV:L:S:::Q:: consensus QVEEGDIIVTEMTMPDMVPAMKRAAGIITDEGGMTSHAAIVSRELGVPAVVGAGDATRTL #oth 1142..1121...1.......1..2..1..1.......1.11....2..1..1331.451 VNG0330 KIG:::::A::::T:::::::::::::V::::::::::::::::::C::::::T:::T:: hla2704 ::Q:::VM::::::::::::::::::::::::::::::::I:::::::::::T:NG::V: NP1196A K:G::::::::::T::::::::::S::::::::::::::::A::::A::I::::N::DA: HQ1570A ::SD::::I:::::::::::::::S:::::::::::::S:::::::::::::::S::T:: HVO_0812 ::A::::::::::::::::::::::::V::::::::::::::::::::::::T::G:K:: Hbo0721 ::SD::::::::::::::::::::S::V::::::::::::::::::::::::T:S:::EI rrnAC1795 K::D:::::A:::T::::::::::N::::::::::::::::::::::::::::E:::QK: Hmu0866 K::P:::::::::T:::::::E:::::V::Q:::::::::::::::::::::TDAG:DR: consensus EDGQTVTIDGDKGTVREG---AEEEEEERDPVEEARPKTPVKPMTATEVKVNVSIPEAAE #oth 511161.1...1.3.34.22242444335323242325211....1..1.......1..1 VNG0330 C:D:A::L:::R:V::D::::R::TTT:H::I:D:::T:::::::::::::::::::::: hla2704 N:::N::L::::::::A:ATADA:SG::FE:::A:::E:::::::::::::::::::::: NP1196A :::::::::::::S:T:::::DV:PD::T:A:::VK:QS::::::::::::::::::::: HQ1570A D:::L::L::::::::::E:::::::QPHE:T:D:::T:::::::::::::::::::::D HVO_0812 :::EV::::::::::::::::E:P::KQ:Q:::::::::::::::::::::::::::::: Hbo0721 :E::PI:::::::::S:::::::LK::Q:E:I:::::::::::::::::::::::::::: rrnAC1795 R::E:I:L:::::::EK:ANVP:TT::DK:AGP-VETHSA:::::G:::::::::::::: Hmu0866 Q:::D::::::::I:EP:ATA:AD:P:PSSVGDGTDAGLAA::::G::I:::::::A::: consensus RAAATGADGVGLLRIEHMILSLGKTPERYIEDHGERAYVDEIVEGVRGVAEEFYPRPVRV #oth ..............1...1.113...4211211.11..22.11212.41.11.......1 VNG0330 ::::::::::::::M::::::TN:::K:::D::::D:::Q:L:D:I:::::::::::::: hla2704 ::::::::::::::::::V::::::::K::A:::A:::Q::LI::::R::D::::::::: NP1196A ::::::::::::::M::::::TN::::::::::::D::IE:::::::::::::::::::: HQ1570A ::::::::::::::M:::V::::::::Q::A:N:::::I::L:DDM:TA::::::::::I HVO_0812 ::::::::::::::::::V:T:::::G:F::QN::::::::::S:::EA::::::::::: Hbo0721 ::::::::::::::::::V:::::::DK::A:N::::::E:L:::I:::::::::::::: rrnAC1795 :::::::::::::::::::::TD:::S::V:::::::::::::::::S:::A:::::::: Hmu0866 :::::::::::::::::::::TS::::::V:::::::::::::D:::T:::A:::::::: consensus RTLDAPTDEFRQLEGGEDEPHEHNPMLGYRGIRRSLDRPELFKHELDAFRRLYEMGYDNV #oth .11...1....1.2..22..3.1.....1..1..1..3.35.22..5.12.1111....1 VNG0330 ::::::::::::::::N::::::::::::::V:::::::DV:::::S::::::::::::: hla2704 ::I::::::::E:::::G::A:P:::::W::::::::K::P:RQ::A::A:::::::::L NP1196A ::::::::::::::::DN::::::::::::::::::::::::E:::E:::::F::::::: HQ1570A :::::::::::::::::::::::::::::::::::::A::I::::::::::I:::::::: HVO_0812 :::::::::::::::::N::R:::::::::::::G::N:SV:RL::Q:::::FD:::::L Hbo0721 :S::::::::::::::::::R::::::::::::::::K::::::::E:::::F::::::: rrnAC1795 ::::::S::::::Q::::::S::::::::::::::::::GE::L::R::E:::DL::::: Hmu0866 :::::::::::::D:::N::A:::::::::::::::::::T:RL::::IA:::DL::::: consensus EVMFPLVNDAEDVLRARELMREAGIDPEKREWGVMIETPAAALCIEELAEAGIDFASFGT #oth .3.1...1..2114221511452.1.12224..1.1....1..51.32132.2..1.... VNG0330 ::::::::::Q::A:::D::AD::::V:::S::::::::::::A:::I:QE:V::::::: hla2704 ::::::::::N::EGIKRH:::S:::::THR:::::::::S::Q::D::A:::::::::: NP1196A :I:::::::::::V:::N::ES::V:::V:S:::::::::::::::D:::T::::::::: HQ1570A :L:L:::::::E:IQ:::::KR:::::STQ:::I:::::::::E:::I::::V::V:::: HVO_0812 ::::::::::::::::K:H::::::::::::::::::::::::::::::D:::::::::: Hbo0721 :M:::::::::::::TK:::QG::::::::::::::::::S::SV::M:D::L::V:::: rrnAC1795 :L:L:::T::::I:::KA::Q:V:::::::D::::V::::S::S::GIC::::::V:::: Hmu0866 :::L::::::::::Q::Q:LEA:::::D::T::::V::::S::G::Q:C:T::::::::: consensus NDLTQYTLAVDRNNENVADRFDELHPAVLQLIGDTIETCREHDVATSICGQAGSKPEMVD #oth ..............13..221.....1..4.1331.21..12112.......1...2..2 VNG0330 ::::::::::::::GS::::::::::S::T::ER::DA:::::::::::::::::::::: hla2704 :::::::::::::::H:::::::::::::::::::::::::LG:D::::::::::::::: NP1196A ::::::::::::::::::Q::::::::::::::N:::::::::I:::::::::::::::R HQ1570A :::::::::::::::H:::Q:::::::::S::DN::::::DLG:K:::::::::::K::Q HVO_0812 :::::::::::::::H:::IY::::::::K:::::::::::VG:K:::::::::::K::Q Hbo0721 ::::::::::::::::::G::::::::::K:::::::::::VG:K:::::::A:::Q::Q rrnAC1795 ::::::::::::::G::::::::::::::E:MRQV:G:::::::::::::::A:::Q::: Hmu0866 :::::::::::::::A::G::::::::::E:::R:::::::::::::::::::::::::R consensus FLVNEGVSSISANIDAVRDVQHEVKRVEQRLLLDSVR-- #oth 1..23.11...1.1...1...1....2..1.1.112.21 VNG0330 :::ET::::::::::::::::::::::::::::E:A:E: hla2704 :::EA:I:::::::::::::::::::T:::::::::::: NP1196A ::::::::::::::::::::::::::K::K:::::I::: HQ1570A :::EA:I::::::::::Q:::::::::::::I:::::SS HVO_0812 :::DK:::::::::::::::::::::::::::::::::: Hbo0721 ::::::I::::::::::::::::::::::::I::D:::: rrnAC1795 :::D:::T:::P:::::::::::::::::::::E::::: Hmu0866 Y::::::T:::::V:::::::Q:::::::::::E:::ES