|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2549 | HQ2034A | NP2482A | hla1634 | HVO_2639 | Hbo2203 | VNG1839 | Hmu2494 | rrnAC3454 |
1725 | HQ2034A | 2533 | 1359 | 1452 | 1393 | 1447 | 1507 | 1519 | 1562 |
1865 | NP2482A | 1359 | 2541 | 1600 | 1617 | 1624 | 1544 | 1508 | 1454 |
1975 | hla1634 | 1452 | 1600 | 2727 | 1826 | 1797 | 1478 | 1568 | 1623 |
1996 | HVO_2639 | 1393 | 1617 | 1826 | 2596 | 2056 | 1535 | 1500 | 1544 |
2019 | Hbo2203 | 1447 | 1624 | 1797 | 2056 | 2679 | 1513 | 1537 | 1572 |
1824 | VNG1839 | 1507 | 1544 | 1478 | 1535 | 1513 | 2539 | 1606 | 1664 |
1901 | Hmu2494 | 1519 | 1508 | 1568 | 1500 | 1537 | 1606 | 2529 | 1716 |
1934 | rrnAC3454 | 1562 | 1454 | 1623 | 1544 | 1572 | 1664 | 1716 | 2517 |
379 symbols consensus -----------------MRVAILAHEQFPDRAKTAVGVLRYGDYDVVAVLDRDRAGTRVA #oth 1111111111111233232112.1.22..21....3.211.214212.11..232.3414 HQ2034A :::::::::::::::::::I:::::::::NH::::I:I:::S:HN:::::::TKT:E::C NP2482A :::::::::::::::::::::::::::::G::::::::::::TD::::::::E::::A:G hla1634 ::::::::::::::MSDD:IV:::::K::::::::L::M::::Q::R:::::::::D::H HVO_2639 :::::::::::::MNDPQ::VV::::K::::::::T:::K:A:::::::::::NP::TA: Hbo2203 VVIVSETMTTARTDGGPE::VV::::K::::::::T:::K:A:::I:::::::NP::SA: VNG1839 :::::::::::::::::::::L:::G:::::::::::::::A::::A::::::T:::Q:: Hmu2494 ::::::::::::::::::DI:L:::G:::G:::::::::::::QN:R::I:::T::D::N rrnAC3454 ::::::::::::::::::A::::T:DA::::::::::L:::::RT:R:LI::E:::Q::H consensus DHVDDV-QDAPIVASMADA-----PDVDALLIGIAPIGGGFDESWRPDVRTAIERGCDVI #oth .235231212.1111222111112322...41..1....2.131..3.122.11212.23 HQ2034A :Y:S::::::::IEE:SQV::::SSE::::S:::::::::::ST::S:IQD:LVN:Y:I: NP2482A ::L::IDAEI:V:::A::::::::::F:::Y:::::::::::A:::::::::::::A::V hla1634 :::P:::A:::::E:F:::YAAADG:::::Y:::::::::::::::S::EA:::A::::V HVO_2639 ::RR:L:P:V:V::::::::::::::A::::V::S::::A:::T::D:::::L:::::L: Hbo2203 ::R::L:P:V::::::D::::::::EA::::::::::::::::T::D::::::::E:::: VNG1839 ::ITGT:::::::::::AV::::DAA::::I:::::::::::P:::::::A:L:::A::S Hmu2494 :::AE::::::::E::D:V::::::A::::V::::::::::V:::::::::::::::::: rrnAC3454 :SLP:::::::V:::::::::::::E::::V:::S::::E::::::E:::::L::::::Y consensus SGLHYFLADDEEFARLADEHGCELRDVRKPPDDLTVADGTAGDVDADVVLTVGTDCSVGK #oth 2...3..32.41233..32222114.2.4.22..2.13.31331..21.1.......2.. HQ2034A N::::::E::KRIS::::::N::IW:::::::::::S::::DN:::T::::::::::S:: NP2482A :::::::S::Q::TS::::Y:V::::::Q::A:::::::I:R:L::EI:::::::::T:: hla1634 :::::::NG:::LVA::::::VD:V:::E:D::::::T:AS::::::::::::::::::: HVO_2639 ::::::::E:::::::::G:::DIN:::::H:::G::Q:KSA::::E::::::::::::: Hbo2203 :::::::N::::::A::S:Q:V::N:::::HE::S::Q:K:AE::::I:::::::::::: VNG1839 A:::A:::::::::S::A::::::H:I:R:::::G::::::R::::T::T:::::::::: Hmu2494 A:::T:::::P::ST::EQ:D:::::L:D::E::S:::::::A::::::::::::::S:: rrnAC3454 ::::D:::::D::::::A:::A::H:L::::E:::::A::::::::T::T:::::::T:: consensus MTASLELVEAARERGIDAAFVPTGQTGIMIAGWGIPIDRVISDFAAGAVERMVEEAADDH #oth ..213.1331..23.1..1111.....12.322.211.1111.11...1.2225331333 HQ2034A ::T:F::LQT::DQ:::::VI::::::V::TDR::VV:G:::::::::::::IKQV:AEN NP2482A ::TT:::::::::A:L::G:::::::::::::D::::::T::::T:::A::L:AT::E:: hla1634 ::::::I:A:::::::::::::::::::::::::N:::::V:::T:::::D:LV:VG::: HVO_2639 :::T::::::::::::::G:I:::::::::::::N:V:::V:::T:::::E:IL:KG:E: Hbo2203 ::V:::::::::::::::G:I:::::::::S:::N:::::::::T:::::E:IL:VG::Y VNG1839 :::TR::YA:::DV:L::G::A::::::L:ESD:V:V:::VA::::::::DA:TA::AN: Hmu2494 ::::Y::RD:::A::::::V:::::::VL:E::::VV::::A:::::::::L::T::E:: rrnAC3454 ::::F:IRD::::::L:::V::::::::A:SDR::V:::::A:Y:::::::L:::-:QAA consensus DLLFVEGQGSIAHPAYSGVTCGILHGAMPDALVLCHEAGREAIHGYESFAIPPISEYVDL #oth .222....1114.....2..112...241.5.11..2.2.3312..14331123442334 HQ2034A ::II::::::::::::::::TS::::::::G:I:::A:N::::R::DHISL:::D::TRT NP2482A :Y:::::::::L:::::P::::L:::TQ::W:::::::::KRV::::D::::EP:AVA:Q hla1634 :::V:::::::I:::::A::::::::S:A:G:::::A:::::V::::::SL::LAD:::: HVO_2639 :V:::::::::V:::::A::::::::::A:K:::::::T::::::::E::L:DL::::S: Hbo2203 :V:::::::::T:::::A::::::::::::::::::V::::H::::D::D:S:::K:::: VNG1839 :YV:::::A::V::::::::TSV:::SA::H:::::::::GSV:::DT-TL:::ESFPAR Hmu2494 :::I:::::AL:::::::::TS:::::R::R:::::V:::T:VN:::DT::::VA::AS: rrnAC3454 :::V:::::AL:::::::::TS::::SV:::::M:::::::::::::::D:::LP::::I consensus YESLAAPVSDASVVAGALNTSHIDDDA-AADAVADYADELGAPATDPVRFG-ADDILDAV #oth .14113113234211.21..42224333.44.1441221211.12.1..32133522332 HQ2034A ::Q:SGL::P:K:::::I::H::EEAK::RT::::::AAID:::::::::D::TK::N:: NP2482A :L:::E::APTTLLG:::::::L:GG:::ET:ID:::::::V:VV::::QS::AP:VEQL hla1634 ::G:::::NE::I:::::::KDV::::A::E::T:FG::A:V::A::::D:::GR:V:GI HVO_2639 ::N::D::HEVD::::M:::::V:::VE::E::DAF:::::V::V:::::::SA:LI:G: Hbo2203 ::::SE::HES:::::::::::::::SE:RA::ES:::::::::::I:::D:::E::::: VNG1839 ::R:::::::SD::G:M:::R:::A::D:H:::::::TAID:::::::::::P:AV:E:I Hmu2494 :::V::::A::P::::T:::QSLQPE:::DR::ST::::::V:::::::::VD::L:AV: rrnAC3454 ::R::::I::::::::M:::R:L:::::::::::G:SAA:D::::::::H:VP:EV:::I consensus L------------------ #oth 5221111111111111111 HQ2034A :K::::::::::::::::: NP2482A -:::::::::::::::::: hla1634 VEAGLGEGTAAADGGVADE HVO_2639 F:::::::::::::::::: Hbo2203 VED:::::::::::::::: VNG1839 R:::::::::::::::::: Hmu2494 T:::::::::::::::::: rrnAC3454 :::::::::::::::::::