| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 5185 | VNG2390 | NP0744A | hla0653 | HQ3725A | rrnAC2996 | Hmu2715 | HVO_0029 | Hbo1467 |
| 4362 | VNG2390 | 5225 | 3960 | 4000 | 3971 | 4125 | 4183 | 4049 | 4047 |
| 4403 | NP0744A | 3960 | 5149 | 4091 | 4029 | 4155 | 4181 | 4058 | 4120 |
| 4446 | hla0653 | 4000 | 4091 | 5558 | 4084 | 4195 | 4129 | 4165 | 4195 |
| 4441 | HQ3725A | 3971 | 4029 | 4084 | 5283 | 4160 | 4098 | 4174 | 4339 |
| 4690 | rrnAC2996 | 4125 | 4155 | 4195 | 4160 | 5183 | 4574 | 4406 | 4330 |
| 4659 | Hmu2715 | 4183 | 4181 | 4129 | 4098 | 4574 | 5160 | 4237 | 4220 |
| 4607 | HVO_0029 | 4049 | 4058 | 4165 | 4174 | 4406 | 4237 | 5282 | 4500 |
| 4620 | Hbo1467 | 4047 | 4120 | 4195 | 4339 | 4330 | 4220 | 4500 | 5345 |
758 symbols consensus ----------------------------------------------------MSDT---- #oth 111111111111111111111111111111111111111111111111111111221123 VNG2390 :::::::::::::::::::::::::::::::::::::::::::::::::::::::A:::S NP0744A :::::::::::::::::::::::::::::::::::::::::::::::::::::T:::::: hla0653 VRRPPGWGFGGVRRRSTIDHYKRSSRRTRTPAPPTTPYRRAAQVSPPPTVRIV::A:::D HQ3725A ::::::::::::::::::::::::::::::::::::::::::::::::::::::N:S:KS rrnAC2996 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::G Hmu2715 :::::::::::::::::::::::::::::::::::::::::::::::::::::::S:::: HVO_0029 ::::::::::::::::::::::::::::::::::::::::::::::::::::::ES:::: Hbo1467 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::SGSG consensus GPLSPDRPDVDRPFRVDAPFDPAGDQPDAIEQLAAGFEAGADKQTLLGVTGSGKTNTVSW #oth 11.23.1.3212311.1...1......1..24.14.124.134...............1. VNG2390 :::Q::::EA:V::::E:::::::::::::AE:V::Y:Q::QQ::::::::::::::::: NP0744A :::Q:::::L:::LS:::::E::::::::::T:V::::S::E:::::::::::::::::: hla0653 S:::E:::T::::L::::::E::::::E::AE:VE:::S::::::::::::::::::::: HQ3725A ::::::::A:::D:::::::::::::::::NS::S::D::MTE::::::::::::::::: rrnAC2996 ::::I:::::::E::::::::::::::E::::::S:YRQ:M:R::::::::::::::::: Hmu2715 :::::::::AETA:::::::E::::::::::::VD:YRR:M::::::::::::::::::: HVO_0029 ::::A::::A::E::::::::::::::E:::A::R::RE:::V::::::::::::::::: Hbo1467 :A:T::H:E:::D::::::::::::::E::::::R:::::ME::::::::::::::::A: consensus VVEEIQQPTLVIAHNKTLAAQLYEEFRELFPDNAVEYFVSYYDYYQPEAYVEQTDTYIDK #oth 23..112....1..............13..............1.......1....11.1. VNG2390 ::::L::::::::::::::::::::::S::::::::::::::N::::::::::::K::E: NP0744A :L::L::::::L:::::::::::::::::::::::::::::::::::::::::::::::: hla0653 :A::LN:::::L::::::::::::::::::::::::::::::::::::::::::::F::: HQ3725A ::::::R::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2996 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::F::: Hmu2715 AI::L::::::::::::::::::::::S:::::::::::::::::::::::::::::::: HVO_0029 ::::::K::::L::::::::::::::KG::::::::::::::::::::::I::::::::: Hbo1467 T:::::K:::::::::::::::::::KN::::::::::::::::::::::I::::::::: consensus DMSINEEIDRLRHSATRSLLTRDDVIVVASVSAIYGLGDPANYTDMSLRLEVGQEIDRDE #oth 12...1..1.............1.................3..41.1.12.3.3434.12 VNG2390 :A:::D::::::::::::::::::::::::::::::::::R::EE::::V:R::S:G::Q NP0744A ::::::::E::::::::::::::::::::::::::::::::::EE:A::::A:D:RS:ED hla0653 E:::::::::::::::::::::N:::::::::::::::::Q::R::A::::::E:VG:E: HQ3725A :L::::::::::::::::::::::::::::::::::::::::::::A::F:::SQ:N::: rrnAC2996 :A:::D::::::::::::::::::::::::::::::::::R::I::::S:::::::E::: Hmu2715 :A:::D::::::::::::::::::::::::::::::::::R::V:::::::E::Q:E::: HVO_0029 ::::::::::::::::::::::::::::::::::::::::K:::::::::::::GM:::: Hbo1467 :::::::::::::::::::::::::::::::::::::::::::::::::::::DRM:::D consensus LLAQLVDLNYERNDVDFTQGTFRVRGDTVEIYPMYGRYAVRVEFWGDEIDRMLKLDPLEG #oth ..33..1...1......2..........1.11...1.111.112..1....14.2.124. VNG2390 :::K::::::D:::::::::::::::::::V:::::::P:::::::::::::A::::::: NP0744A ::SA::E::::::::::Q:::::::::::::::::::H:::::::::::::L::V:IVD: hla0653 :::R:::::::::::::::::::::::::::::::::::::::L::E:::::::V::MK: HQ3725A :::::::::::::::::Q::::::::::::V::::::::::I:::::::::LS:::::T: rrnAC2996 ::G:::::::::::::::::::::::::L::::::A:::L::::::::::::::V::::: Hmu2715 ::G:::::::::::::::::::::::::::::::::::::::DM:::::::LV:M::::: HVO_0029 ::RA:::::::::::::R::::::::::::VF:::::::::I:::::::::::::::::: Hbo1467 ::RR:::::::::::::Q::::::::::::VF:::::::::I::::::::::Q:::::Q: consensus EVVSEEPAVLLHPAEHYSIPEARLEQAIEEIEELMEDRIRYFERQGDLVAAQRIEERTTF #oth 3.2.3...213.......1.143114..31.242143.151.1.1.13............ VNG2390 T:E:::::::F:::::::V:D:EM:::::R:RTD:HE:V:H:::T::M:::::::::::: NP0744A ::::::::T:I:::::::V:DR:::T::::::G:L::::D:::::::::::::::::::: hla0653 :::::::::M::::::::::DDK:::::A::QG:::K:VG:::::::::::::::::::: HQ3725A N:::::::::V:::::::::::K::S::D:::T::T:::Q:::::::::::::::::::: rrnAC2996 ::K:::::A::::::::::::Q::QR::D:::K:LDQ::S::::::NH:::::::::::: Hmu2715 ::::Q::::::::::::::::Q::QR::::::DMLA:::::::::::A:::::::::::: HVO_0029 ::K:S:::::V::::::::::EQ::G::S:::::::Q:VKH:Q::::::::::::::::: Hbo1467 A:K:T:::::I::::::::::DQ:::::S:::::::E:V::::::::::::::::::::: consensus DIEMLRETGYCSGIENYSVHLSDRESGDAPYTLLDYFPDDFLTVIDESHQTLPQIKGQFE #oth .1..13.1.1.........1111.13.11.1..1....11....1....2.2...1..11 VNG2390 :L::MA:A:::::::::::Y:::::V:::::::::::::::::::::::R:V::::::Y: NP0744A :::::Q:::H::::::::::M::::T:EP::::::::::G:::::::::::I:::::::: hla0653 :::::::A::::::::::::MD:::::::::::M:::::::::::::::::I::::::Y: HQ3725A ::::::::::::::::::::M:::D:::P:H:::::::::::::V::::::::::R:::A rrnAC2996 ::::MQ:::::::::::::::::::T:E::::::::::::::::V::::::::::R:::: Hmu2715 :L::MK:::::::::::::::::::::E::::::::::E:::::V::::::I:::::::: HVO_0029 :::::::::H:::::::::::::::P:::::::::::::::::::::::V::::::::YA Hbo1467 :::::Q::::::::::::::M:N::::::::::::::::::::::::::::::::R:::A consensus GDKSRKDSLVENGFRLPTAYDNRPLTFEEFEEKTDRTLYVSATPGDYEREHSDQVVEQIV #oth ..11..1...2........1.....1.1..2312121.11....111..23.3211.... VNG2390 ::::::::::D::::::::::::::::A::AD::::::::::::::H::AQ:AN:::::: NP0744A ::R:::E::::::::::::::::::K:::::A:::::::::::::::::D::E::::::: hla0653 :::::::::::::::::::::::::::::::::S::::::::::S:::::T::RIA:::: HQ3725A ::::::::::K:::::::::::::::::::QK::GTR::::::::T::::::E::::::: rrnAC2996 ::::::E::::::::::::F:::::::::::::::Q:::::::::::::D:::::::::: Hmu2715 ::::::E::::::::::::F::::::::::::::::::::::::::::::E:G::::::: HVO_0029 ::::::::::::::::::::::::::::::::TVGQ::FA::::::::::::::I::::: Hbo1467 :::A:::::::::::::::::::::::::::::::Q::::::::::::::::E:IA:::: consensus RPTHLVDPAIEVADATGQVEDLLERIDERIERDERVLVTTLTKRMAEDLTEYLEEAGVDV #oth ...1.1..211223.21..2..23.13522211..1.........1.....11.11.12. VNG2390 ::::::::D:SI::::::::::MD:::::VA:::::::::::::::::::::::::::A: NP0744A :::Y::::D:::EP:EK:::::I:::QATP:-::::::::::::::::::::::N::::: hla0653 ::::::::KV::TE:::::::::::VN:::::::::::::::::::::::::F::::I:: HQ3725A :::::I:::::::::::::D:::N::NK:V:::::::::::::::S:::::F:::::::: rrnAC2996 :::::::::V:I:S:::::::::::::D:VD::::::::::::::::::::::::S::N: Hmu2715 :::::::::::::::S:::Q::::::ESMPD-E::::::::::::::::::::::S:::: HVO_0029 ::::::::KV::TE:::::D::MA::::::D::::::::::::::::::::::::::::: Hbo1467 ::::::::KV:L:::::::D:::D:::T:::::::T:::::::::::::::::::::::: consensus AYMHDETDTLERHELIRSLRLGEIDVLVGINLLREGLDIPEVSLVAILDADQEGFLRSET #oth 1.............11.2....411...........................1.....1. VNG2390 E::::::::::::::V:G:::::Y::::::::::::::::::::::::::::Q::::::: NP0744A :::::::::::::::V::::::::Q::::::::::::::::::::::::::::::::::: hla0653 ::::::::::::::I::D::::N:::::::::::::::::::::::::::::::::::T: HQ3725A :::::::::::::::::D::::T::::::::::::::::::::::::::::::::::::: rrnAC2996 ::::::::::::::::::::::D::::::::::::::::::::::::::::::::::::: Hmu2715 ::::::::::::::::::::::::Q::::::::::::::::::::::::::::::::::: HVO_0029 ::::::::::::::::::::::D:::::::::::::::::::::::::::::Q::::::: Hbo1467 :::::::::::::::::D::::H:::::::::::::::::::::::::::::::::::T: consensus TLVQTMGRAARNVNGEVVLYADETTDAMEAAIEETQRRRRIQQAFNEEHGYEPTTIEKAV #oth 1.1..........1.1.1....23111.41..3..1...3..232.11..3213..2.21 VNG2390 S:::::::::::::::::::::::::::Q:::D:::::::::R::::D::TT:::::::: NP0744A :::::::::::::E:S::::::::::S:A::::::R:::E::RE::A:::H::R::::P: hla0653 ::::::::::::::::::::::RM::S::::::::::::E::LKH:::::::AA::D:P: HQ3725A :::::::::::::E:::I:::::I::S:S:::D::R:::Q::RKY::::::D:Q::Q::I rrnAC2996 :::::::::::::::::::::::RSN::QS::Q::::::::::QY::D::F:::::::E: Hmu2715 ::::::::::::::::::::::D:S:::RS:::::::::Q::::Y:::::F:::::::EI HVO_0029 :::::::::::::::::::::::M::::::::S::::::::::E:::::::T::::::E: Hbo1467 ::I::::::::::::::I::::::::S::::::::::::A::::::::::::::::D::: consensus GETNLPGSETDTSGVAGDAPADADEAARQIERLEDRMQEAADNLEFELAADIRDRIRELR #oth 1121...131225432435252321.551126..3..32.111...........112311 VNG2390 :DM::::A::::AD::::::S:EQ:::LLV:D::A::ED::S:::::::::::::M:::: NP0744A S:::::::S:::D:::DV::DTV:::EQL:::::T::::::::::::::::::::::::: hla0653 S:::::::K::::N:SVGDVES:E::KA:::A:::::D:::S::::::::::::::AK:: HQ3725A ::::::::DD:STTRTTET:V:KQ::RI:::T::E::ES:VSD:::::::::::Q::DIQ rrnAC2996 ::::::::K:E:G:ISS:GAS:::::T::::Q::E::::::::::::::::::::::::: Hmu2715 ::SS:::A:::::D::::G:::::::::::D:::A::A:::::::::::::::::::::: HVO_0029 ::::::::K:::R::S::E:::::::VE::AF::::::::::::::::::::::::QN:: Hbo1467 ::::::::::SATRS:SEQ:T:E:D:RE:::Y:::::::::::::::::::::::::D:: consensus REFDLD--GGDDG---------DGVPAPG-----PDEF #oth 12.22211331221222332343232314111223323 VNG2390 EA:::::::::AP:::::::EDP:GV::E:::::TEDW NP0744A ET::--:::LE:P::::::::NE:::S:D:::::-E:: hla0653 :A:E::::::::::::::::::--::::M:::::I:D- HQ3725A :::G::HNEAE:::ANGVNPGQ:PLAS:S::::ST:SN rrnAC2996 E:::::::::::S::::::::::::::::::::::-:: Hmu2715 E::E::::::::::::::::::-::::::::::::G:: HVO_0029 ::::V:::ALE::VAPEYPDEH::EADD:::LTP:::: Hbo1467 :::::F::DEEE:VEPEADPLD::::TDDDGLAP::D: