| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4503 | hla0314 | HQ1329A | HVO_0619 | Hbo0901 | NP0158A | VNG0203 | rrnAC1950 | Hmu0525 |
| 2885 | hla0314 | 4857 | 2075 | 2339 | 2421 | 2328 | 1096 | 1989 | 2168 |
| 3022 | HQ1329A | 2075 | 4706 | 2668 | 2913 | 2344 | 1137 | 2075 | 2353 |
| 3458 | HVO_0619 | 2339 | 2668 | 4684 | 3281 | 2673 | 1179 | 2325 | 2676 |
| 3592 | Hbo0901 | 2421 | 2913 | 3281 | 4656 | 2738 | 1221 | 2405 | 2636 |
| 3222 | NP0158A | 2328 | 2344 | 2673 | 2738 | 4517 | 1245 | 2451 | 2759 |
| 1437 | VNG0203 | 1096 | 1137 | 1179 | 1221 | 1245 | 2092 | 1161 | 1299 |
| 2839 | rrnAC1950 | 1989 | 2075 | 2325 | 2405 | 2451 | 1161 | 4071 | 2883 |
| 3248 | Hmu0525 | 2168 | 2353 | 2676 | 2636 | 2759 | 1299 | 2883 | 4634 |
690 symbols consensus ---------------------------R-SSLSVLDRGLYALFARHADARRHDRDRRRYR #oth 111111111111122233232334455363553431242211123122442124214311 hla0314 MSGEPQRGADAAGGGRALDAAEADGFT:T:GS::V::V:::::::::SD::::A::K::: HQ1329A :::::::::::::::::::::::MGSSSR:WYKLP:QIA:::::D:::G:A::QH::T:: HVO_0619 :::::::::::::VTEFDAGADERRVG:VR:::::::A::::::::V::G:::::::::: Hbo0901 ::::::::::::::::VTDTVSRSVAA:DD:I:::::V:::::::::::S::E::::A:: NP0158A :::::::::::::::::::::::::::-M:VA:R:::::H:::S::::SA::::::D::: VNG0203 :::::::::::::::::::::::::::-:------------------------------- rrnAC1950 :::::::::::::::::::::::::::-:------------------------------- Hmu0525 :::::::::::::::::::::::MATETPRQ:NP::::::::::Q:::SG:::G::V::: consensus GTDLRVGFDLYLARVYGLAWAAGLAVAVPT----LAVPASTLDGVLAAAQAVIP--GRVP #oth 223345312331114123213453444444454444325444466344465533664635 hla0314 ::A:DT::ETH:::::::S:LVCV::I::A:::::L:A:::VP:L::::D:W:GARSP:: HQ1329A :::FA:A::V::::::A::::SS::AG:T:GIMLITA:::LFAIIISQGTS::TQL:LIT HVO_0619 :::M:MS:::::::A::::::T::F::F::ALVA::::D::V:A::DVLR:AL:LFEH:: Hbo0901 :::::I::::F::::::AS:::M:L::::IPFLF::L:T:::::WV:F:ES:V:FA::L: NP0158A :AG:T::::T::::I::IS:LVAAVL:AAVAAIL:VA:VDAATTA:G::AP---:::D:S VNG0203 ------------------------------::::--------------------::---- rrnAC1950 ------------------------------::::ML::PE:F:SFI:VL:QSL:VIN:LA Hmu0525 AA::DAS:E:::::T:::::V::::GCLFVLVVTA:::PAV:AE:V:FF:NGV:IVNQ:H consensus I-----------------PSVPRLVVAVVAALAVGGTVKRAVVAAGGRYLRWVAAARRAD #oth 411111111111111111354334633443355435452352445235213144521143 hla0314 ::::::::::::::::::G:LSPER::::::GLT:FLA:::T:RL::LH:::LT:T::T: HQ1329A VLNSLITMTGAYTTTSVYQIHVQF::::ILS:SAV:::RWS:IYM::::::::TT::::A HVO_0619 :::::::::::::::::::V::::P:VGAF::::AVATR:V:L:VA:Q::G:L:T:::EN Hbo0901 :::::::::::::::::::RI:::FLGI:::A::::A:::S:::L:::::G:I::::::N NP0158A L:::::::::::::::::::::::YS::A:GV:::AIG:::T::S::A::::RVD:::TA VNG0203 -:::::::::::::::::------------------------------------------ rrnAC1950 L::::::::::::::::::A::::L::T:LGTGA:L:L::G:FV::N:::S:::S::::: Hmu0525 W::::::::::::::::::V:::P::::G:G:VG::::RLL:LR::ST:::::GK:::S: consensus IERTLPGAVRYLRVLASGSDGRRAMLRRVADQDAYGETAVALRRALNTAALTGSLDEGLR #oth 132211311111431231333315123321431111212433243125252212323122 hla0314 ::::::P:::::EL::A::::P:K:VEKA:AN::::G::TS::K:::A:R:A:::::::: HQ1329A :D::::S:::::N::S::::N::::::::::T:::::::TSI:TV:::::M::NIN:::: HVO_0619 ::::::::::::H::S:::::P:G::::::ET:::::::I:F:SV::::S:::NVN:::: Hbo0901 :D:M::::::::H::::::::::T:::::::T::::::::S::K::::::M::NIN:::: NP0158A :::::::::::::A::D::E:::E::::::K:::::::SAE:::V:RK:E::::::S::: VNG0203 ------------------------------------------------------------ rrnAC1950 :AA:::::::::::::::THD::E:::A::E::::::::::F:::::QGI::::::T:IE Hmu0525 ::A:::::::::::::::EHDQ::::G::::::::::::::FQ:I::R:::::::::::E consensus RVARDTPSRELLAPFLLKFREHANQGSDALRNYLRMESRMLSHRQDRARERAEGFLELLA #oth 311221123431311111112114224311531142121214232224241153211112 hla0314 ::::::::::::::::::::K::AT:DA::AE:::T:::::A:::::::K::RR:::::T HQ1329A :::::::AQ:T:G::::::::::D::E:::G:::S::::::RY:::SE:Q::Q::::::: HVO_0619 ::::::::EGM::::::::::::G:::::::::::::::::G:::::::::::::::::: Hbo0901 :::::::AENT::::::::::::D:::::::::::::::::G:Q:::::R:::::::::: NP0158A S:::E:::::::S:::::::::::::::::QG:::::::::::QRS:E:Q::GDY::::: VNG0203 ------------------------------------------------------------ rrnAC1950 :::SE::::D:::::::::::::::SAE::EG::E::G:L:::E:S:QH:::T:Y::::: Hmu0525 H::SE::::D:::::::::::::::SA:::EG::Q::G:L:::E:S:RH:::T::::::: consensus ELFVVLLVLPALLVIIVTVMSVLAPGLSAPVATPVGETTTRAVVVYGSAAFILAVGLGAA #oth 121212111121212341323333121363242231542524332122331343314522 hla0314 :::::V:::::::::AA:ALT:VV:E:LP::D::::VVP:::::L::AVV:LV:I::VG: HQ1329A ::::::::::::V:::I::::L:S:::A::IQ:I::VV:IQE:I:::::V::::::I::: HVO_0619 :::I::::::S::::VL:::::I:::::::::::L:Q::::G::::S:::::VG:::::S Hbo0901 :I:I::::::::::::L:::::I:::::TT:P::::T::L:G:I::::G:::I::::::: NP0158A :::I::::::::::::::::::::::::R::PI:-::P:M::LL:::::::V:V::GC:: VNG0203 ------------------------------------------------------------ rrnAC1950 ::::::::::::V:L:::::GI::::::D:::::L::::V::I::::::::VM:A::L:: Hmu0525 ::::::::::::::L:::I:G::S::::EQ::::A:PM:V:S:L:::::G:V::A:AS:S consensus SLVATLRPPNQSA-SYDRPASLRGILATATRNPASAAVVFAPPGVVVAGVLAALGYRAVN #oth 5314521143463141541544463142243..111341332434333432243355313 hla0314 VA:G:::::::R:::::L::FP:K:::S:G:::S:::::C:::AALL:VG::FA::TL:: HQ1329A :::ES:::AD:KQ:Q:VH:P::I:T:T:::Q::S::MI::TLI:::G::LSVG:DVDLLV HVO_0619 V:::G::::D::V:E:::::GALRV:DSTLS::::::A::VFS:L:::::A:FV:AD::G Hbo0901 :::::I:::D:TV:T:A::ETTV:M:::::T:::::TLA:V:L:::ASL:A::AKSNI:D NP0158A A::VE:::A:HGV::::::GG-LET:V:::T:::::::::L::ASALG:L:WWV:EP::: VNG0203 -------------:----------M:TN:P::::DT:::A:L:S:G::CW:::HELG::: rrnAC1950 FV::::::R:TA:P::SL:D:PVA::::IPS:::::LLAC::L:A:::AG:WS::::P:: Hmu0525 L:::AI::HSA::P::TA:::::S:VE::S:::::::R:L::TVP::VA:::G::::P:: consensus VALLGYVAYALPVGAVAVRRARLDDAKDRELQDFVHAVSGHVSLGRPFPEAVERVARDVD #oth 12.32.13223...2132..114.1...1.131....11..131.1..43..43.132.1 hla0314 ::::S:A:F:V::::::G::T:I::::::::A::::::::::AQ:::::A:::A:::::: HQ1329A AS:V:::S:SI:::V:::::::S:::::H::K:::::I:::IN:::::VD::TH::S::: HVO_0619 :::A::::::A:::L:G::::::::::::::K::::::::::N:::::G::::::G:::: Hbo0901 :V:A:::V::I:::V:::::::::G::::::K:::::I:::::::::::::::H:::E:E NP0158A ::::::A::G:::::IS:::::::::::::IR::::::A::::::K::D:::QT::EE:: VNG0203 AV:M::::F::::::::A::::I:::::::::A:::::A:::G:::::GG::S::::G:: rrnAC1950 ::::S:ATVGV:::V:T:::::A:::::::I:::::::A:::A:::::::::R:::D::E Hmu0525 ::::A::::G:::::::::::KV:::::::I:::::::::::::::::S:::::::EE:: consensus LGPLDADVADLAFNLRLTTAPGGAGT-----------------DLRAAALDRFVERVGTP #oth 1.2.44..32..33.431344424341111111111111111134.21.112..3..1.1 hla0314 ::V::D:::::::A::S:::T::::STERARDTGSTGASAQSPGV::::I::::Q::::: HQ1329A ::::SN::T:::S::Q::::H::VE:::::::::::::::::::::T:::::::T::::: HVO_0619 ::::::::::::L:::F:APSS:TDV:::::::::::::::::N::T:::A:::D::::: Hbo0901 ::::SD::::::L:::::SPNT:TDE::::::::::::::::::::T::::::::::::: NP0158A F:::Q:::D::::R:G:::GTRDG:::::::::::::::::::--:RE:::::::::::: VNG0203 ::A:NP::D:::VA:AA::T:RAG:V:::::::::::::::::--:R:::AG:::::D:Q rrnAC1950 ::A:AS::QS:::T:S:GDS::D:AA::::::::::::::::::R::::::Q::D::::: Hmu0525 ::A:QS::DQ:::T:G::AS:DDDA:::::::::::::::::::G::::::::::::::: consensus LAEQTIGLVVGALDAGSDAETVFETLQTEIGRLYHEKRALRSGLLVYVAVGWTTALLVVG #oth 1111.2...31.123...1231.11.13.1.3..122122..3121......11.1..21 hla0314 :::G:L:::TD::N:::::DA:::::RI:V::::S:Q:::::SMHP::::::AA:A::AA HQ1329A :::::V:::I::M:::::TGV::::::A:V::::::::S::::M::::::::::::::I: HVO_0619 M:::::::::::::G:::TG:::D:::::::::::::::::::::::::::::::::::: Hbo0901 M::::::::I::::::::TG:::::::S:V:::::::::::::M:::::::::::::::: NP0158A :S:::V:::T:::SV::::::T:::::::::S:::QRKK:::AMA::::::::::::::: VNG0203 ::A::V:::S:::::::::DAT::A::S:V::::::::SV::R::::::::::::::::: rrnAC1950 M:::::::::::::T:::::D::::::::::Q:::LRKSI::A:::::::::::::::I: Hmu0525 M:::::::::::::::::::D::::::::::K::::RK::::S::::::::::::::::: consensus ITVAVNAYVLDGFAQLSAVSDAA---GVAIDPEAVDLERDRYRFYVVTQATMLACGWFAG #oth 11111243.222112.14313341113333323112331123.3.11..1...12..... hla0314 VVAV::TQ:I:A-:H:ADLAG:T:::DFVAE::T:LP:LE:F:L::::::::::S::::: HQ1329A ::::TSTQ:FA:::R:AIT::V:::::::-GG::I::V::Q::L:I:::S::::A::::: HVO_0619 ::::::VH:F:::::::TL:TGR:::SF::NAG::::::::::M::::::::::S::::: Hbo0901 ::::TG:H:F:::::::SM::LS:::::::::R::::::::::I::T:::::::S::::: NP0158A :V:::::::::::::::S::G:S:::::::::::::I:::AW:::::::::::::::::: VNG0203 :::::SHT::GS:T:::::::::SAG:LS:::R:::VA:::F:::::::::::::::::: rrnAC1950 ::::::I::::S::::::::GG::::NI:F::T:IKPA:EQH:::::::::::::::::: Hmu0525 :V:::::::::::::::T::SGP::::IT:::T:::PP:::::::::::::::G:::::: consensus TASRGRYEALLHSGALVAVCYLVFAGAGLI #oth 2...11.2.11..24..22112.1213.22 hla0314 :::::::A::F:::L:::I::A::TAG::V HQ1329A V:::::::::::::C:::I:H:::V:T:V: HVO_0619 :::::::::::::A:::VA::::Y::V::: Hbo0901 V::::::::::::::::::::V:::::::: NP0158A V:::S::::::::S:::V::::::::::M: VNG0203 A::::::S:V::::V::::A:A::T:V::G rrnAC1950 :::::V:::::::SG::L:A:V:::::::: Hmu0525 :::::::::::::::::::A:V::T:::MV