| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4101 | HQ2659A | hla2443 | Hmu1136 | rrnAC0463 | NP3474A | VNG0881 | HVO_1565 | Hbo3486 |
| 2753 | HQ2659A | 4585 | 2413 | 2328 | 2353 | 2553 | 2408 | 2417 | 2531 |
| 3095 | hla2443 | 2413 | 4413 | 2493 | 2645 | 2701 | 2683 | 2865 | 2944 |
| 3017 | Hmu1136 | 2328 | 2493 | 4101 | 2862 | 2774 | 2637 | 2718 | 2764 |
| 3111 | rrnAC0463 | 2353 | 2645 | 2862 | 4117 | 2740 | 2713 | 2814 | 2785 |
| 3283 | NP3474A | 2553 | 2701 | 2774 | 2740 | 4094 | 2889 | 2853 | 2841 |
| 3203 | VNG0881 | 2408 | 2683 | 2637 | 2713 | 2889 | 4160 | 2845 | 2891 |
| 3329 | HVO_1565 | 2417 | 2865 | 2718 | 2814 | 2853 | 2845 | 4339 | 3252 |
| 3490 | Hbo3486 | 2531 | 2944 | 2764 | 2785 | 2841 | 2891 | 3252 | 4620 |
645 symbols consensus MEFAEFAARAAEIEAEPADLATTALVADLFADAG------DDLPTVARFVQGRVFPAHDS #oth .2.23..3313311212..232141134.2621122111131.4212.122.1....223 HQ2659A :Q:DD::NHVIT::::S:::EI:S::SK:LTT::NMD::DKT:S::V::IK:T::::WS: hla2443 ::::A::D::E:LA:::::IG::R::T::LGA::GTDEND:::A::T::LL::::::::T Hmu1136 ::::::::T:::::G:S::I:::E:::G:L:::D::::::E:::ILT:L::::::::YEA rrnAC0463 ::::A::D::EA::S:S::T:I:EA:T:::RAS:::::::S::S:L:::::::::::YE: NP3474A ::::::::::::::S:::::E:VD:::T:C:::::::::::::G:::::::::::::::: VNG0881 :K:GS::TF::D:::TD:::DVV::::E::DA:D::::::S::DV:::::::::::::SE HVO_1565 :Q:::::::::::::::::::VVS:LS:::S::::::::::::::::::::::::::W:: Hbo3486 :Q::::::::S:::::::::::V:::R:::C:::::::::::::V:T::::::::::W:: consensus TTLDIGPRLCYEAIARAAGPNVDADDVEDRLADVGEIGAVAASYDLGGQQGLAAFGGGTD #oth 21..1..4.1211112...2..321.1.4.1.16.1..1..332111..2..1..24155 HQ2659A Q::::::A:LHTT::Q:::::::SA:::N:::EY::::::::::::N:::::S::TPS:P hla2443 R:::V::A::R:::::::::::T:::::::::EE::::::::GFEF:::R::::::E:R- Hmu1136 :K:::::K:::::L:::::R::AV::I:A:V::::::::::TEL::::::::::::A:SQ rrnAC0463 R::::::::::::::::::Q::S:::::Q::::L::::::::::::::::::::::A:GG NP3474A :K:::::S:::::L:K:::::::S::I:R:::E::::::::E:L:::::::::::::::: VNG0881 :K:::::Q:::T:LS::::R::::::I:A:::ET:D:::::G:L:::::T::::::::D: HVO_1565 ::::::::::H:::::::::::S::::::::::R:::::::::::F:::R::::::S:EQ Hbo3486 :::::::::LR::::::::Q::T::::::::::A::::S:::A::F:::::::::S:::N consensus --DGLTVAEVDDELRALAAASGDGSEDTKRDTLFGLFNRASSAEARYLARLVLGEMRIGV #oth 3224...331241.232.112.2..3341244.11..112324..221..11.1...2.. HQ2659A :::S:::GH::KT:::V:S:::::::SRR:NL:::::SQ:::S:::V::::I:::::::: hla2443 :::R::::A::A:::R::::A:::::SH:::A:::::::CEP:::KVI:::::::::L:: Hmu1136 ::SP::::::A:::A:I:S:::S::H:::VE::::::::::D::::::::I::S:::::: rrnAC0463 GD:A:::::L:::::N:::VD:S::QG::V:I:::::S:C::T::G:::::::S:::::: NP3474A R:EA:::SG:EET:Q:::::A::::T:A:::R::D:::::EPT:::F::::::::::V:: VNG0881 HA:::::SG:A:::A:::::A::::QSE:VTL::::::QCT:R::::::::::::::::: HVO_1565 :::::::::::S::::::::::S:::E::LK::Y:::::TDPD:::F::::::S:::::: Hbo3486 :::::::N:::ET::D::::::P::::R:LN:::::::::::S::K:::::::::::::: consensus GEGTVRDAIAEAF----------------------------------------------- #oth .2.1....2121.23222212223333334333233344433334242332221222222 HQ2659A :T:::::::ISG:IEPAADADKKTLESREDAKSVPPASQPEITNKISGDTSPNTSESVQT hla2443 :::A::::::::::::::::::::::LAGNPEGDERDESDTDDDPILRAG:::::::::: Hmu1136 ::::::::::A::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0463 ::::::::A:A::::::::::::::::::::::::::::::::::::::::::::::::: NP3474A ::::::::::A::::::::::::::::::::::::::::::::::::::::::::::::: VNG0881 :::A:::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1565 ::::::::V::::LV::::::::APADAAAIRDDDADAETEAAARERR:::::::::::: Hbo3486 :A::::::V::::LADFESATEESEDDEGGPKDDDAEDRSKDDDAEDRPKDDDTEDTADD consensus ---------DV-PVAAVERALQVSNDYGMVAETARDEGAAGLDAVGLEVGRPVQAMLAQA #oth 2222222222212542.21.1..2..1.3..43..13.541.5345.32...11...... HQ2659A KKSDPDTSSN:D:S:V:::::::::::::::TI::NQ:Q:::IDIS::L:::I::::::: hla2443 ::::::::::E:A:V::::::::T::::R::VL:::::LN::R:E::A:::::::::::: Hmu1136 ::::::::::A:::D:::S::::T::::N::RV::::::D::SDLE:TI::::K:::::: rrnAC0463 ::::::::::::::E:::::V:::::::::::V:::::ES::AT:T::I::::::::::: NP3474A :::::::::E:::EPD:::::::A::C:L:::::::D::::::DI::V:::::K:::::: VNG0881 :::::::::::::T:::Q::::::::::L:::::::S:TDA:::M::::::::::::::: HVO_1565 :::::::::NE:AI:::A:::::::::::::GL:::::E::::G:R:::::::::::::: Hbo3486 ADEPTTYAT:E:QL:::::::::::::::::V::::::KE::K::H:::::::::::::: consensus GTVTDALDEWDEAAVETKFDGARVQVH--------ADGEDV--------RLFSRNMEDVT #oth 11222.1231331.1.2.1......1.2212112241.13211111111211...112.. HQ2659A ADGV::V:T::AV:I::::::::::I:::::::::T:::S:::::::::S:Y:::::::: hla2443 ::A:::VEAFG:V::::::::::::::YVPE::SA:E:D:AAGGTELGP:IY::::D::: Hmu1136 ::::E::ED:ET::::W:Y::::::::::::::::D:::T:::::::::::::::::::: rrnAC0463 :::AG::ED::R::::W:Y::::::::::::::::F::::A::::::::::::::::E:: NP3474A ::AVE:::::GT::::::Y::::::::::::::::Y::DSA::::::::::::::L:E:: VNG0881 ::::::::::H::::::::::::::::::::::::Y::D::::::::::V:Y:::::N:: HVO_1565 ::AA:::G::GT:::::::::::::::::::::RD::::V-::::::::S:::::::::: Hbo3486 ::::::::::::::::R::::::::::VAPDDASAD:::::::::::::S:Y::::D::: consensus DALPEVVEFVEDAVDVPAILDGEVVAVDDDGDPLPFQEVLRRFRRKHDVAAMREEVRVEL #oth 21...2.131256123.1.1.1.1..2121.3.11...1.1.....1.12111.314121 HQ2659A :P:::I:::ISQK:T::::::A:::::S::::::A:::::::::::Y:ID::::S:NLNV hla2443 ::::::::Y::AR:S::V:::::::::::::::::::::::::::::::DR:::::GLR: Hmu1136 :P:::::SA::::::G::::::::::::G:::::::::::::::::::::RAS:T:G:R: rrnAC0463 :P::::::T::STL:A:::::::::::::G:::::::::::::::::::::A::D:A:R: NP3474A EP:::::::::QSLS::::::::::::::::T:R::::I::::::::::::A::D:S::: VNG0881 G::::L:::::NN:TA:V:I:::A::A:E:::::::::I:K::::::::::::::IS::: HVO_1565 ::::::::::AG:::D:V::::::::M::G:E::::::I::::::::::DR::::::::: Hbo3486 :::::I::::::H::::V:::::::::::::A:::::::::::::::::GR::::::::: consensus HAFDCLHA----DGEDLLDAPLRERHDRLAELLADTS-AVSDLLLADDADEIAAAEAAAL #oth 21.....21111223...141253.132.421252333241534323.23311342341. HQ2659A YV:::::I:::::DA::::I:::::REK:R::FNT:D::L:PFQ:TT:PNV::Q:RSK:: hla2443 :::::::::::::::::::E:F:A:::::::V:S:--::AASVEF:G:PAA:E::::::: Hmu1136 ::::::::::::::R:::::::VD:R:A:DAV:G::DAVR:TFW::::TER:EDIADE:: rrnAC0463 ::::::::::::A:::::::A:ET:::::ES:FPAD:DVF:QMW:S:::E::ESL::E:: NP3474A Y::::::V:::::::::::T::S::::::ES::::--:G::P:SY::::::V:DI::D:: VNG0881 ::::::::PSADG::::::::FSD::R::RSVVD:A:::::EV:VT::::::::F::T:: HVO_1565 R:::::::::::A:D:::AD::AA:::::TA::G:D:P:::::::S::P:::::Y::D:: Hbo3486 :::::::::::::S:::::::VT:::A::::V::::N:::::::VSE:::::::F:E:S: consensus DAGHEGIMLKNPDATYSPGNRGKNWLKRKPDVETLDLVVTGAEWGEGRRANVLGTFLLSA #oth 42.1..1...1.312.2..3..22.1.1......1.2..1..1.......341.1.2111 HQ2659A SN::::V:::D::S::N::S::QH:::H::::::::::::::::::::::::F:::VV:: hla2443 G:::::V:::::E:A:T:::::RD::::::::::::A::V::::::::::ELF:::::GV Hmu1136 A:::::::::D::S:::::K:::H:R::::::::::::::::Q:::::::TY::::E::: rrnAC0463 A::Q::::::D:T:A::::K:::H:R::::::::::C:::::::::::::::::S:E::V NP3474A :::::::::::::S::T::S:::::::::::::::::::::::::::::::L::::VV:: VNG0881 EG::::::::::A:P:T::D:::D::::::::::::::::::::::::::S::::::::: HVO_1565 ::::::::::::::P::::D::::::::::::::::::::::::::::::EF:::::::: Hbo3486 :::::::::::::S::::::::::::::::::::V::::::::::::::::H:::::::: consensus R----AGDDGYATIGKVATGITDEELADLTERLEPHVRSEDGQTVDIEPAVVFEVGYEEI #oth .1133232242222.1....1..11.34.21212.2132.2.331313.21.2....... HQ2659A :::TT:DEQQFNSL::::::L::DQ:TT:::Q:R:::::::::::M::::I:V::::::: hla2443 :::::::::EL:::::::::L::::::::::::::::V::::TEIE:R:E::L::::::: Hmu1136 :::::-T:::::PV:N::::::::Q::T:::L:::::TR:T::R:E:::::::::::::: rrnAC0463 :::::-T::::::V:N::::::::::D:::::F::YI:::::RD:VLD:::::::::::: NP3474A :::::-A::::EPV::::::::::::ER:H:::Q::::T:::TD:::::::::::::::: VNG0881 ::::D:AG::FE::::::::L::::::A:SD:::::::::::::::::::::L::::::: HVO_1565 :VEAES:::AFE:::::::::::::::E::DL:::EIER:A:KE:::R:S:::::::::: Hbo3486 :::DES::GD:::::::::::::::::E:SDL:::EIV:::::::ELN:S:::::::::: consensus QRSPTYSSGYALRFPRFVGVREDKTPDDADSLERVERLAASQ--- #oth .3.21.4..1......1241.3..23422.113.131.1552421 HQ2659A ::::::D::F::::::V::I:H::AIS:V:::S:IKH:TTGESPD hla2443 :T:::::::::::::::::::D::SV:::::::::V:::GDEK:: Hmu1136 :::S::E:::::::::::EI:S::AVA:G:T:::::::::R:G:: rrnAC0463 :A:QS:A::::::::::LS::::::::S::::A::::::E::::: NP3474A :Q::::G:::::::::::::::::S:S:::::::ID::TS--::: VNG0881 :A::::::::::::::::S:::::::TT::TI::::::::Q:QQ: HVO_1565 :T::::::::::::::::T::::::AET::::D::::::D::::: Hbo3486 :::::::::::::::::IA:::::::::::::D:I::::E:::::