| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4094 | NP2520A | rrnAC3311 | Hmu2285 | VNG1905 | hla0998 | HQ3316A | HVO_2350 | Hbo2034 |
| 2728 | NP2520A | 4157 | 2389 | 2322 | 1946 | 2126 | 1899 | 2157 | 2088 |
| 2791 | rrnAC3311 | 2389 | 4117 | 2935 | 2037 | 1929 | 1869 | 2094 | 2026 |
| 2831 | Hmu2285 | 2322 | 2935 | 4147 | 1985 | 2035 | 1942 | 2082 | 2056 |
| 2492 | VNG1905 | 1946 | 2037 | 1985 | 4292 | 2038 | 1824 | 2072 | 2020 |
| 2793 | hla0998 | 2126 | 1929 | 2035 | 2038 | 4197 | 2084 | 2485 | 2419 |
| 2551 | HQ3316A | 1899 | 1869 | 1942 | 1824 | 2084 | 4324 | 2306 | 2581 |
| 2968 | HVO_2350 | 2157 | 2094 | 2082 | 2072 | 2485 | 2306 | 4193 | 2539 |
| 2850 | Hbo2034 | 2088 | 2026 | 2056 | 2020 | 2419 | 2581 | 2539 | 4206 |
632 symbols consensus -------------------------------------MMADETRVEWREWGPEAFAEARE #oth 111111111111111111111111111111111112255424.311.24..521.23.32 NP2520A ::::::::::::::::::::::::::::::::::::MTFR:G:L:D:HA::E:P::R:DR rrnAC3311 :::::::::::::::::::::::::::::::::::MDEY:RD:K:::::::TAP:ED:A: Hmu2285 :::::::::::::::::::::::::::::::::::MDQF:A::K::::::::A::EA::: VNG1905 MPEGCRACLIAFLLPPVPFGGPKPFPGGDAEYCRMSDASD:R:::::::::SD:::D::: hla0998 :::::::::::::::::::::::::::::::::::::-:T:::H:::LD::A::::::D: HQ3316A ::::::::::::::::::::::::::::::::::::::IE:P::I:::Q::D:::T::QA HVO_2350 :::::::::::::::::::::::::::::::::::::-:T::::::::::::D::::::A Hbo2034 ::::::::::::::::::::::::::::::::::::::TD:::::::HK::::::E:::A consensus ADKPILLSLTATWCEECREMDAETYAEPRIAANINDGFVPVRVDVDRHPRVRERYNMGGF #oth 433.2.211211.144.12.1541.21.11...2112.1.1..13113.11....2.... NP2520A EKT:::C::::P::DW:HR::E:V:SD:KL::::GES:I::::N::E::::::::::::: rrnAC3311 SG::V::A::VP:SA:::A::RG::G::::::::::::::::::A::N:::::::T:::: Hmu2285 :G:::::A::VP:SP::::::RK::::::::::V::::::::::G::::E:::::I:::: VNG1905 RGV:L:V:VV:::S:S::A:AQR:::::::::::::D::::::NAA:R:::::::::::: hla0998 R:C:V::::S:::::G:H::::V::::::::::V:E::::I::::::::::::::::::: HQ3316A S:T:::::::::::NS:::::I::::::::::::::::I:I:::I::::::::::::::: HVO_2350 :::::::::S:::::D:H:::::::::::::::L::::::I::N:::Q::I::::::::: Hbo2034 DE::V:::::::::DG:H:::V:::G:::::::V::D::::::::::::::::::::::: consensus PSTVFLTPDGELITGATYLGPDGMRQVLDSVRETWDAKGAAAGRVPRALQDDLPPAGEVT #oth .1.1.21.3.3312..31122..1.11121..23.344.431.12.12.53352.31214 NP2520A :T:::::::::VLS::::::R::F:::::::::S:::::G:::::::S:S::DR:::::: rrnAC3311 ::::::::E::V:::::F:::::F:GI::::::S:::Q:::::SI::Q:::ES:::::LR Hmu2285 ::::::::E:TVL::::::::::F:GI::::::::ETE:E:::S:::S::T:A::::::: VNG1905 :::::V:::::H:A:::F:E:::F::::QR::::::DA::D::S:::::SGGE:::APLS hla0998 :T:A::::E:::L:::G::DV:::::::E:::QM:AD::RS::::::::DA::::R::L: HQ3316A :::::C::T:K:L:::A::::::::::I::::SV:AER::D:::::Q::T:NPT:T:T:D HVO_2350 ::::::A:::HP:::::FI::::::::I:R:::V::K:::E:::L::::RG::::::::S Hbo2034 :::::C::S:::::::M::::::::::::R:::::SE::DSS:::::::A::PT:E:P:E consensus ARIEEHLAGQLEAAYDDEFAGWGDDAKFPLPRTVEFALKRDRDRALRTLDAIRTHLLDDV #oth 54..32211.23532.2221...243...1.1.11...1.3141.311.221233.5133 NP2520A :A::A:MVE:VA:SF::::G:::TG:::::::::S:::::::E::T:::E::::::::TY rrnAC3311 P:::::MVE::LG:F::::G:::T:V::::::::::::V:A::Q:T:::E::::::::TY Hmu2285 :::::AMVE::L::::E:YG:::T:V::::::::::::V:A::Q:T:::E::Q:::R:TD VNG1905 GD::GLV::::ADQ::S:H::::SSE:::::E::S::::::::::::::::::R::VG:- hla0998 DA::S:::::I::K::E:H::::S:::::::::I::::::::G::::::::V:D::A::: HQ3316A E:::S::V::::SKW::R::::::N::::::::I::::::KQSQ:IE::RV:AES:Y:HD HVO_2350 PQ::S:::::::V:F:EAHG::::A:::::::::::::::::S::::S:::::DG:Y:P: Hbo2034 SH:::::::::DEK:::R::::::GT:::M:::I::::::S:RQ:VE::RT:AET:F::: consensus DGGFFRYANGRDWSDPHREKLLDENAALVRAFANGYLYTGEEAYLDPAERTVDFLTDTLW #oth 3..11.115423.14244.13223..12321..11.11..2131153.532521.3251. NP2520A ::::Y:F:ET:S:GE::::::V:::::::ST::H:::::::::::QS::::::Y::T:A: rrnAC3311 :::::::STE:S:GN:R::::::::::::::::H::R:::T:::R:A:Q::::Y::T::: Hmu2285 ::::Y::::::T:::ART:R:::::::::::::H::R:::::::RET:::AIEY::TK:: VNG1905 :::C::F:H:::::::QT:RT:SV::GMLA:::HA::T::DDE:RGA:TGVL:Y::E::: hla0998 A:::::F:GTP::G:VAY::PI:T:::VT:::::A:::::D::::A::TDA::::::G:: HQ3316A I:::Y::::S::::T::K::I::T::::I:::::::::::::TL::::YG:QQ::I:Q:: HVO_2350 E:::::::DDAA::K:N:::T:ES::::L:::::::R::::D::::::SGAA:::V:S:: Hbo2034 E:::::::D::::::::H:::::S::::::::::::::::DDDL:N::ME:R:::A:R:: consensus ---TGA---AFAGSQGP-GGDDYYRLEAEERANADPPRVDLTVFADRNALAADALLTLAA #oth 1113.5111111214414346523546454235453132.2111.13.11111..25321 NP2520A :::A:E:::::::::--:AAS:::T::PT::E::E::H::E:::::::GM::E::FEI:: rrnAC3311 :::A:D::::::A::A-::S:E:::::PT::EGTVS:N::E:::::::G::I::::WV:: Hmu2285 VDTS:DTSG::::::A-::D:T:H::D:SD::S:::::::E:::::::GM:I:::A:Y:: VNG1905 :::::::::::GAGET:D::------------------::DAAY::G:::::::::S::: hla0998 :::::Y:::GVG::V::GL:RA::AAS:AD:EEL::::R::::::GG:::::::::AV:: HQ3316A :::N:Q:::::GK:TV:RSENESVTEASKTT:DT---:R:::AY:GS:::M:::::::G: HVO_2350 :::::T:::G::::M::AA:T:::L:GK:G:D::PG::T::::Y:GG:::::::::V::G Hbo2034 :::N:::::::G::V::::DEN::GQT:::::ESAG::R:::AY:GA:::::::::::T: consensus YTDDERARRYAERALDTLAED-LVD--DGAVTHYR-----------------------GA #oth 1.1.32143123.2136244521111141614.235311111111111111111111124 NP2520A L:::DSPA::::::::HVL:T::::::::H:S:FA:::::::::::::::::::::::DD rrnAC3311 :::::::QQ::S::R:AVC:S::::::G:E:A::D::::::::::::::::::::::::: Hmu2285 ::::::::::::::RE:I::T:::E::N::A::::TD:::::::::::::::::::::E: VNG1905 ::G:D::T:::::T::YI:DEL:::::-DT:R::A::::::::::::::::::::::::: hla0998 ::::::::E::::I::G:ER:::I:ADS:::::::GS:::::::::::::::::::::DE HQ3316A ::::KT:YE:SR:::A::ESAFII:::N:I:L:AKYDRESDNASIADDATVITEIADI:S HVO_2350 L:::::::EFGS:::SRV:::::::::::V:::F:SG::::::::::::::::::::::D Hbo2034 ::::GT::D::V:T::F:DTR::I:::::D:::FDAG:::::::::::::::::::::ET consensus AGETGLLADQARVLAALTTAAQVLGED--------LDPARAVADAAIDRLQDDD--GAFR #oth 43223..2.3.13341321141.112522112144344.411..41.251443411.1.2 NP2520A :S:::::::H::L::G:::::::T:P:::::::GW:E::::I::D:::::KTA::::S:: rrnAC3311 DSD::::L:::QL:QG:::SW:::::P::::::::-G::K:I::WT:ENR:Q:::::::: Hmu2285 V:P::::L::::::QG:::SW:::::G::::::::-G::::I::W::EH::TES:::::: VNG1905 :APV:::::R:::TG:::::G:::DPA:::::::Y:E:::::::R::AD::::T:::::V hla0998 V:::D::::A:::VS:Y:R::G::::G::::::::ATV::::::R:::::RV:-:::S:V HQ3316A SKPVL::E:H::IIN:FV::H::::PNVDALSDTPVSI:S::::::::A:Y:P:TN:::: HVO_2350 :::DL::E:::::V::ACR:R::::DETVA:GDPL::F:AE:::::::E:F:E-:::S:L Hbo2034 T:::H::E:H::TVS:FVR:R::::D:::::::WY::R:Q::::V:::E:KA:G:::::: consensus DGPASGAGLLDRPLRPLDANVEMADALLDLAALTGEERYRTAAREAIAAFAGAADRMGVQ #oth ..252.31.133122.1131112.3..31.23221231.331.441321....51.21.1 NP2520A ::DPT:::::G:::Y::ET:A:F:::::::WG:::DD::M:::TD::::::::YE::::E rrnAC3311 :::D:::::CT:S:H::::T::L::::V::::::::D:::N::LS:VES:::::E::::E Hmu2285 ::::D:P::CS:SQY::::T::L::::::::::ADD::::E::HG::::::::S:::::E VNG1905 :::ET::::::E::::I:DTAA:::::V::SY::::A:::D:::D:::::::::E::::: hla0998 :::R:::::::::F::::G:::::T::::::::::::::E:V:::TAES::::TE:LS:: HQ3316A :::TT:P::::C:::::::T::::E::FE::VVSDTK::S:V:TN:L::::::R::L::: HVO_2350 ::::::EA::SS::::::G:::::N::V:::::::D::::EV:Q:T:::::::W::I::: Hbo2034 ::L:::S:::::::::::::::::N::C::::A::::P:ED::Q:::G:::::W::I::: consensus VAGYATAAARLLRDPLVVRVGAEAGSDLHRAALRVADHEKVVVPDADGDG---------G #oth ..4.13311.24352412333252.11.....1.3....23.214333361111112133 NP2520A ::Q:::::::AHY::V:::T-PP:::::::::::I:::::::::E-:RET:::::::::- rrnAC3311 :::::GV::::-QQ:QTLT::::::T::::::::L::::TT:::EP:::::::::::::- Hmu2285 ::H::AT::::-:S:A:L:::PR:::::::::::L::::T::::::G::E:::::::::- VNG1905 :::::::::::STR:::I::ADDP::E:::::::M:::::::AVGV:::P:::::::::: hla0998 ::E:GSL:G::::GTT::A::D:P::::::::W:::::::::::N:HREDAPAPRSVPV: HQ3316A ::::GA:T::AT:PM::::I::GV::::::::::I::::AI:I:SVSDIQ::::::::HD HVO_2350 ::A:G:::::::::::::ELNDGV:::::::::::::::AL::::::A::::::::LPA: Hbo2034 ::::GSV:::VT:PT:::A:::T:::::::::::::::::::::::::VS::::::::AS consensus TARVLAGDRA-ATATTPDELMA-AVSGDAE-- #oth 3132551255363222.331341322453422 NP2520A AVV:RS:ETS::P:EA::::LDR:A::P:P:: rrnAC3311 :::L:D::AIV:EG:::A::E:::LT::R-:: Hmu2285 AVLFED:E:V:G::EE:AG:E::VLT:::-:: VNG1905 ::WLDTA:GDTDAVA::SA:A::L:ADT:Q:: hla0998 S:V:::::V:SQP:E::::::T:R:AETV::: HQ3316A S::LTR:SKV:E:::::::I:N::::MLT::: HVO_2350 ::::S::ET::VE::::E:::E::::TVTPDA Hbo2034 E:V:SL:::E:R:V:::EQ::T::::DITDGV