|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1676 | HVO_B0049 | Hbo1614 | HQ2297A | NP1090A | hla2078 | Hmu2007 | VNG1567 | rrnAC3020 |
1367 | HVO_B0049 | 1673 | 1542 | 1284 | 1266 | 1295 | 1278 | 1346 | 1309 |
1373 | Hbo1614 | 1542 | 1672 | 1314 | 1257 | 1294 | 1278 | 1340 | 1329 |
1468 | HQ2297A | 1284 | 1314 | 1911 | 1397 | 1378 | 1389 | 1398 | 1419 |
1509 | NP1090A | 1266 | 1257 | 1397 | 1697 | 1476 | 1490 | 1411 | 1443 |
1541 | hla2078 | 1295 | 1294 | 1378 | 1476 | 1764 | 1538 | 1439 | 1488 |
1566 | Hmu2007 | 1278 | 1278 | 1389 | 1490 | 1538 | 2073 | 1460 | 1506 |
1535 | VNG1567 | 1346 | 1340 | 1398 | 1411 | 1439 | 1460 | 1742 | 1485 |
1566 | rrnAC3020 | 1309 | 1329 | 1419 | 1443 | 1488 | 1506 | 1485 | 1778 |
281 symbols consensus MTTD-------------------D-FEEYADLGATTENAMDIAETSMDRVRELVPDETLA #oth ..14112222232333444345436213........23.11..11...1.122.11...2 HVO_B0049 ::ER:::::::::::::::::::-:-DA::::::::QE::::::::::I::TF::::::N Hbo1614 ::EK:::::::::::::::::::-:-:D::::::::QE::E:::::::I::TF::::::N HQ2297A :::E::KNAHMDLSTDGGSGSTN:EY::::::::::SD::E:::S::::::::::::::E NP1090A :::::::::::::::::::::::ET:::::::::::SE::::::::::::HD:::Q:::: hla2078 :::::::::::::::EPRPDDADES:D::::::::::::::::T:::::::::::::::: Hmu2007 ::::GATPEESRDEGDPAADEER:A:::::::::::::::E:::::::::::I::::::: VNG1567 :::::::::::::::TTPDGDDEQD::S:::::::::K:L:::::::::::::::::::: rrnAC3020 :::N:::::::TDDATDGDANSD:G:::::::::::S:::::::::::::::::R::::: consensus DRLRQKSVHATGDPEFQHLVRFTG-D-SEPVRAGARAVLDERPIVTDITMVKAGITGRGH #oth ..3.1.1..1...1.....3.13121232.112..1...2.2.1......1.1.1..... HVO_B0049 ::::::A::S:::I:::::I:CQN:-:-D::V:::::::::::V::::::A::::::::: Hbo1614 ::::::A::S:::I:::::I:CQN:-:-N:AV:::::::::Q::::::::A::::::::: HQ2297A ::::::A:::::::::::::::A::-:-D:::T::::::S:Q:::::::::::::::::: NP1090A ::M:A::::::::::::::M::::T:E:::::N:::::::::::::::::::E::::::: hla2078 ::V:::::::::::::::::::::T:D::::::::::::E::::::::::::E::::::: Hmu2007 ::I::::::::::::::::M::::T:D:::::::::::::::::::::::::E::::::: VNG1567 :::::::::::::::::::L::N::-:G:::::::::::::A::::::::::::V::::: rrnAC3020 ::I:::::::::::::::::::::A:DD:::::::Q:::::Q:::::::::::::::::: consensus DCPVRKAIGNGAELAAETGMTRTAASVLELDKQGVYDDAIAVVGNAPTAALALADCIEDG #oth 2.2.3......1.............1.....22...11..111.....1....1...14. HVO_B0049 ::Q::::::::::::::::::::::A::::::E::::G:::::::::::::::C::::N: Hbo1614 ::::K::::::::::::::::::::::::::::::::G::::::::::G::::::::::: HQ2297A Q:::K::::::S:::::::::::::::::::R:::::::::TI:::::::::::::::S: NP1090A N::::::::::::::::::::::::::::::SD::::::::TI:::::::::::::::Q: hla2078 ::::G::::::::::::::::::::::::::RD::::::::::::::::::::::::AE: Hmu2007 :::::::::::::::::::::::::::::::SE:::E:::T::::::::::::::::::: VNG1567 ::E::::::::::::::::::::::::::::::::::G:::::::::::::::::::A:: rrnAC3020 ::::Q::::::::::::::::::::::::::::::::G:::::::::::::::::::::: consensus TRPAVVVATPVGFVKAAESRKRLREVAAEHGVPAITNVGRRGGSGLAAGLTNELVHVASD #oth ....12.......1..1...3.2.2113.111.11.1..1........1.1...1..... HVO_B0049 ::::A:::::::::::E:::::V:D::D:Y::::V::::K::::::::A:::::I::::: Hbo1614 ::::AI::::::::::E:::::V:DI:D:YDI::V::::K::::::::A:::::I::::: HQ2297A ::::AI:::::::I::::::N:I:A::T:Y::::::T::::::::::::::::::::::: NP1090A ::::::::::::::::::::::::A:C::::::TV:::::::::::::::::::I::::: hla2078 ::::::::::::::::::::E::::::R::D:::::::::::::::::::A::::::::: Hmu2007 ::::::::::::::::::::T::::::::::::T::::::::::::::::A::::::::: VNG1567 :::::A::::::::::::::T::::::::Y::::V::::::::::::::::::::::::: rrnAC3020 ::::::::::::::::::::E::::::::::::T:::::::::::::::::::::::::: consensus VRDGDVDLE-------------------------------- #oth 1.3.3131453222222222222221111111111111111 HVO_B0049 ::N:::::ANHE::::::::::::::::::::::::::::: Hbo1614 ::::::::SDHE::::::::::::::::::::::::::::: HQ2297A ::::K:T::TAPTEANRHDHREVER:::::::::::::::: NP1090A A:::E:E:-:::::::::::::::::::::::::::::::: hla2078 A:N:E:::S:::::::::::::::::::::::::::::::: Hmu2007 ::A:ELSI:SSPAGRPSGERSDPRGGASESAERSSGESDGE VNG1567 ::::::S:TES:::::::::::::::::::::::::::::: rrnAC3020 ::E:V:::-::::::::::::::::::::::::::::::::