|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 3067 | HVO_B0054 | Hbo1619 | NP1108A | HQ3032A | VNG1561 | rrnAC3011 | Hmu1999 | hla2072 |
2469 | HVO_B0054 | 3091 | 2731 | 2171 | 2125 | 1077 | 2247 | 2214 | 2271 |
2434 | Hbo1619 | 2731 | 3092 | 2119 | 2159 | 1086 | 2227 | 2206 | 2253 |
2387 | NP1108A | 2171 | 2119 | 2987 | 2061 | 1058 | 2186 | 2230 | 2205 |
2510 | HQ3032A | 2125 | 2159 | 2061 | 3156 | 1154 | 2412 | 2393 | 2379 |
1299 | VNG1561 | 1077 | 1086 | 1058 | 1154 | 1567 | 1220 | 1198 | 1259 |
2698 | rrnAC3011 | 2247 | 2227 | 2186 | 2412 | 1220 | 3082 | 2573 | 2577 |
2704 | Hmu1999 | 2214 | 2206 | 2230 | 2393 | 1198 | 2573 | 3092 | 2666 |
2782 | hla2072 | 2271 | 2253 | 2205 | 2379 | 1259 | 2577 | 2666 | 3116 |
420 symbols consensus --------------A-ATPPSLDDEAVLLVGHGSRREKSNEQVRTLAADLEGRLGVPVDA #oth 111111111133344644445212212213111111221111123113521521331221 HVO_B0054 ::::::::::::MSLERPD:A:::D::::::::::::E::::::::::K::S::S::::: Hbo1619 ::::::::::::::MRTEQ:::::D:I::::::::::::::::::::GK::TE:S::::: NP1108A ::::::::::::::-:----M::A:::V:A::::::::::::::::::G::::::F::T: HQ3032A MSNQNIKTSISPSPQS::AARF:::::::I::::::K::::::E:::::::A::D::T:: VNG1561 ::::::::::::::-:-------------------------------------------- rrnAC3011 :::::::::::MSE:ITA:ET:::::::::::::::::::::::D::VE::::::I:::: Hmu1999 ::::::::::MTAD:A:::V::::::::::::::::::::::::E:::AV:E:::::T:: hla2072 ::::::::::VTAD:TS::V::::::::::::::::::::::::E::::::::::::::: consensus AFLELAEPSIEDAIEGLAASVSRVTVVPLSLFAASHVKNDVPLAVQQARTAHDDLTIHNG #oth 222111213143114331332254222311111111112111222341155232333321 HVO_B0054 :YI:::::::D::::TM:PTCRTM::::::::::::::::::::::R::AT:::TEFRF: Hbo1619 :YI::::::::::::T::PTCRTL::I:::::::::::::::M:::T:::KY::V:F:F: NP1108A G:I:::::::PE:::SV:P:::D:::I:::::::::::A::::V:NE:::E:T:VNV::: HQ3032A ::::::T:A::E::DT::::::AIS::H::::::::::::::::LE::::DYPE:::N:: VNG1561 ------------------------------------------------------------ rrnAC3011 ::::::::A:DE::A:::RA::Q:S::H:::::::::::::::::E:::E::PE:::N:: Hmu1999 G::::::::::A::A::::::::::::Q:::::::::::::::::E:::S::P::::::: hla2072 G:::::::D:A:::G::::::::::L:Q:::::::::::::::::::::D::::::V::: consensus AHLGVHPALVDLLDDRAAAVEAELGVDREDDDVAVVLCARGSSDPDSNGDVHKLARLLYE #oth 311121122321112122211331321145112321211111111121312111211111 HVO_B0054 S:::I::S::::::E::R:::SD::::::::::::::::::::::::::::::::::::: Hbo1619 S:::I::SI:::::::IRT::SD:::::DN::::::::::::::::::::::::S::::: NP1108A R:::::::I:E:::::::::::::N::::::::V:::::::::::::::::::::::::: HQ3032A :::::::::I:::::::::::ST:E:::HT:::::::::::::::::::::::::::::: VNG1561 ------------------------------------------------------------ rrnAC3011 :::::::::L:::::::::::::::::::E::::A:V:::::::::A:A::::::::::: Hmu1999 ::::::::I::::::::::::::::L::TA::LT::::::::::::A:S:A::::::::: hla2072 :::::::::::::::::R:::T::::::D:::::::::::::::::A:S:A::::::::: consensus GREFARVEAAFIGVTEPLLEDTLHTVAKRRPDAVVVLPYMLGDGVLTGRIRDGADEFDEE #oth 112143134312111413123211521141112211311........2..312133.121 HVO_B0054 ::::T:::S::::::T:R::E:::::::D::::::::::::::::::E::V:T:ET:::: Hbo1619 ::::T:::PS:::::S:R::::::S:::D:::::::V::::::::::Q::I:T:ET::D: NP1108A ::A::D::::::::::::::PA:::::::::::::::::::::::::E:::ETTAT::D: HQ3032A ::::DD:A:T:::::D:V:DE:::R:::T::::I:::::::::::::::::E:::S:::: VNG1561 ---------------------------------------::::::::::::E::A:::AD rrnAC3011 ::::S::::S:::::::::D::::DI::T:::::::I:::::::::::::K:::R::::: Hmu1999 ::A:DH::TS::::::::::::::::::::::G::::::::::::::Q::::R::A:::: hla2072 :::::::DT::V:::::::::A::G:::S::::::::::::::::::::::::::::HA: consensus YPYVDAAAGDPLGTDSRLLDVLGDRWQEARTGSVEMSCDTCKYKVELDGYEEDVGGARAM #oth .1.23.1212.....5.2121.2..31...111.2..........1.3.11313...1.1 HVO_B0054 ::::::G:SG:::::A:VVET:A::Y::::S::::::::::::::::A:::D:E:::::: Hbo1619 ::::R:G:SG:::::E::V:::A::C::::S::::::::::::::::S:::D:Q:::::: NP1108A :R:AE::C:::::::D:::T::A::FE:::::D:S::::::::::::::F:GEA:::::: HQ3032A :::LS:::::::::::::::::S::::::::D:::::::::::::D:E::A::::::::T VNG1561 ::::E::C:::::::::::::::::::::::::::::::::::::::::::::::::K:: rrnAC3011 :::::::P:E:::::T:::::::::::::::::::::::::::::::::::::Q:::::: Hmu1999 :::::::::::::::::::::::::::::::D:::::::::::::::::::::::::::: hla2072 :::::::::::::::P:I:::::::::::::D::D::::::::::::::::A:::::::: consensus LRALTHQAEHADRDDVDDDPHVHDAPEKHVAVCTNQTCAADGAAAVLERLRQAARDSDAC #oth ..113..12.1..211121.12....21..1..1.1...23.112...2...42..2242 HVO_B0054 ::S:V::::::::S::::::::::::::::::::::::::S:::T:::Q:::GV::A:D: Hbo1619 ::S:V::::::::S::::::::::::A:::::::::::::S:::T:::Q:::H:::::D: NP1108A :::M::::A::::S:I:EE:::::::D:::T::::R:::DA:::T::::::::V::R-GI HQ3032A ::::I::ET::::::::S::DT::::A:::T::M::::::::::S:::Q:::S::::::: VNG1561 ::::N::EA:E:::::A::::A::::DR::::::::::::E::P::::::::E:::A:ED rrnAC3011 :::::::::::::EN::::::::::::::::::::::::Q:::P::::::::::::::Q: Hmu1999 :::::::ET::::EN:::E::A::::::::::::::::::::S::::::::::E:::E:: hla2072 :::::::ET::::::::::::::::::::::::::::::::::P::::G::::::::EE: consensus DARITRSSCLGRCGDGPMVAVYPDGVWYGGVDPDDADRIVSSHLDRDRIVSDLVDQTL-- #oth 12121.1...11..1..2......21..13.4311241.1..111......2112.2.11 HVO_B0054 :VHVS::::::Q:::::I::::::S::::::T:::T::::::::E::::::N::H:S::: Hbo1619 :VHFS::::::Q:::::I::::::SI:::S:T:::TE:::::::E:::::::::H:S::: NP1108A ::::::::::D::::::N::::::N::::::A:E:V:::A::-:E::::::E:::::::: HQ3032A :V:::::::::::::::::::::::::::S::DEG:TE::::::::::::::Y::::::: VNG1561 SL:V::T::::Q:::::N::::::::::QR::::::G::::::T:::::::::DS:L::: rrnAC3011 ::::::::::::::E::::::::::::::::EDE::AE:::::::::::::E:::::::: Hmu1999 :::V::::::::::E::::::::::::::::GE:::E::::::::::::::E::::::SQ hla2072 :::::::::::::::::::::::::::::D::G:::::::::::::::::::::::::::