| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2944 | hla0017 | HQ1415A | NP5324A | VNG0192 | rrnAC2004 | Hmu0485 | HVO_0581 | Hbo0942 |
| 2601 | hla0017 | 2967 | 2459 | 2487 | 2401 | 2455 | 2464 | 2528 | 2500 |
| 2584 | HQ1415A | 2459 | 2930 | 2429 | 2313 | 2437 | 2442 | 2484 | 2525 |
| 2627 | NP5324A | 2487 | 2429 | 2941 | 2385 | 2528 | 2520 | 2459 | 2483 |
| 2480 | VNG0192 | 2401 | 2313 | 2385 | 2760 | 2455 | 2452 | 2388 | 2389 |
| 2693 | rrnAC2004 | 2455 | 2437 | 2528 | 2455 | 3028 | 2777 | 2471 | 2480 |
| 2670 | Hmu0485 | 2464 | 2442 | 2520 | 2452 | 2777 | 2919 | 2512 | 2493 |
| 2624 | HVO_0581 | 2528 | 2484 | 2459 | 2388 | 2471 | 2512 | 2932 | 2563 |
| 2673 | Hbo0942 | 2500 | 2525 | 2483 | 2389 | 2480 | 2493 | 2563 | 2888 |
417 symbols consensus MQDIVNEALERDEAEQRD--ADADDDDDEFGDPRIVIVGCGGAGNNTVNRLYNIGVDGAD #oth 11121531232213134413434442312..2.......1.......1........1..1 hla0017 :::L:QD::DNA:::K::MDVSM:--:::::::::::::A:::::::::::::::::::: HQ1415A :::::E::MQ:::E:RDV:A:E:G::PEG::S:::::::A:::::::::::::::::::: NP5324A ::::::S:::NA::::::MD::LSG:G::::::::::::::::::::::::::::::::: VNG0192 ------------------::M:G:G:G:::::::::::::::::::::::::::::E::: rrnAC2004 :::::::::::::Q::KQ::-LS:S:V:G:::::::::::::::::::::::::::E::: Hmu0485 :::::K::::::::::QQ::-LS:A:V:G::::::::::::::::::::::::::::::: HVO_0581 :::::R::M::::::RQT:QSSLE:S::Q::::::::::A:::::::I::::::::E::: Hbo0942 --------M::::::K:::::E:KS::E:::N:::::::::::::::::::::::::::E consensus TVAINTDKQHLKMIEADTKILVGKSLTQGLGAGGDPSMGERATEMAQGTIKEVLGDADLV #oth .1............1.1..........2......1.21...........1.1...2.... hla0017 ::::::::::::::::::::::::::::::::::::K::::::::::::::::::::::: HQ1415A ::::::::::::::::N::::::::::::::::::::::::::::::::::D:::E:::: NP5324A :I:::::::::::::::::::::::::E::::::E:DV:::::::::::::::::E:::: VNG0192 ::::::::::::::K::::::::::::N:::::::::::::::::::::::::::::::: rrnAC2004 :::::::::::::::::::::::::::N:::::::::::::::::::::::::::::::: Hmu0485 :::::::::::::::::::::::::::N:::::::::::::::::::::::::::::::: HVO_0581 :::::::::::::::::::::::::::::::::::::::::::::::::::D:::::::: Hbo0942 :::::::::::::::::::::::::::::::::::::::::::::::::V:::::N:::: consensus FVTAGMGGGTGTGAAPVVSKIAKEQGAIVVGMVSTPFNVERARTVKAEEGLEKLRNEADS #oth .................11....1............................3..11... hla0017 :::::::::::::::::::::::D::::::::::::::::::::::::::::S::::::: HQ1415A :::::::::::::::::I:::::::::::::::::::::::::::::::::::::::::: NP5324A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG0192 :::::::::::::::::::::::::::::::::::::::::::::::::::::::EK::: rrnAC2004 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0485 ::::::::::::::::::::::::::::::::::::::::::::::::::::R::::::: HVO_0581 ::::::::::::::::::A:::::::::::::::::::::::::::::::::N::::::: Hbo0942 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus IIVLDNNRLLDYVPNLPIGKAFSVMDQIIAETVKGISETITQPSLINLDYADMSTIMNQG #oth .....................................................12..1.. hla0017 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1415A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::D:: NP5324A :::::::::::::::::::::::::::::::::::::::::::::::::::::TS::::: VNG0192 :::::::::::::::::::::::::::::::::::::::::::::::::::::TA::::: rrnAC2004 :::::::::::::::::::::::::::::::::::::::::::::::::::::TS::::: Hmu0485 :::::::::::::::::::::::::::::::::::::::::::::::::::::TS::::: HVO_0581 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0942 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus GVAVMLVGETQDKNKTQEVVNDAMNHPLLDVDYRGASGGLVHITGGPDLTLKEAEGIAQN #oth ................3...2.....................................31 hla0017 ::::::::::::::::::::S:::::::::::::::::::::::::::::::::::::N: HQ1415A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::DS NP5324A ::::::::::::::::K::::::::::::::::::::::::::::::::::::::::::: VNG0192 ::::::::::::::::N:::K:::::::::::::::::::::::::::::::::::::D: rrnAC2004 ::::::::::::::::E:::K::::::::::::::::::::::::::::::::::::::: Hmu0485 ::::::::::::::::E:::K::::::::::::::::::::::::::::::::::::::: HVO_0581 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::S: Hbo0942 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::N: consensus ITERLEASANVIWGARIQDEYKGKVRVMAIMTGVQSAQVLGPSTQKQADKSRRAIQ-GV- #oth .....1.2..........11..................1...1.....11..32221342 hla0017 ::::::::::::::::::::::::::::::::::::::::::::::::::::A:VDSDDL HQ1415A ::::::::::::::::::E::::::::::::::::::::::::::::::A:::SLE::S: NP5324A ::::::::::::::::::::::::::::::::::::::I:::T::::::A:::::E:::: VNG0192 :::::D::::::::::::ES:::::::::::::::::::::::::::::::::EL::D:: rrnAC2004 :::::::D::::::::::E:::::::::::::::::::::::T:::::N:::E::::E:G Hmu0485 ::::::::::::::::::E:::::::::::::::::::::::::::::::::E::::E:G HVO_0581 :::::::A::::::::::::::::::::::::::::::::::::::::::::QS:::SR: Hbo0942 ::::::::::::::::::::::::::::::::::::::::::::::::::::QS::::T: consensus -DSEFDASDNNESSDS---------QGGRSTGGWESDGGRDER-EKNNGLDVIR--- #oth 232424325556644542111111243244616331...23341.131.2..11111 hla0017 G::RSR:AET:GTAGNAA::::::VS::TEQ:A::::::SEPT:::S:::::::::: HQ1415A :A:::NSTQG:TANG::::::::::TS:SEST::Q:::::AP::::QH::::::::: NP5324A D:E::SSTPPADH:A-:::::::::DT::DL:IS:T::::S:A::::::V::V:::: VNG0192 :::KQR:A:D------:::::::::A:AGGF::AH::::Q::V::QE:::::::::: rrnAC2004 D:TS::::::V::F::PAPNSGSQSS:::T::YS:T:::Q:Q::::::::::::TNK Hmu0485 D:TS::::Q:V:EF:D::::::::::::Q:Y:--HT:::::TK::::::I:::-::: HVO_0581 :E:QQQH:GSEFD:SERA::::::::TAQ:-:T:-:::::::V:::::::::::::: Hbo0942 :S::::T:SSSS::SRQP::::::::APS:::S:Q::::::QTE::Q::::::::::