| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4971 | hla1470 | VNG1835 | rrnAC3462 | Hmu2483 | NP2410A | HQ2579A | HVO_1684 | Hbo3152 |
| 4114 | hla1470 | 5104 | 3627 | 3509 | 3549 | 3829 | 3726 | 3759 | 3788 |
| 4059 | VNG1835 | 3627 | 5058 | 3723 | 3737 | 3809 | 3593 | 3638 | 3732 |
| 4162 | rrnAC3462 | 3509 | 3723 | 5189 | 4294 | 3770 | 3587 | 3802 | 3747 |
| 4135 | Hmu2483 | 3549 | 3737 | 4294 | 4966 | 3694 | 3593 | 3836 | 3654 |
| 4289 | NP2410A | 3829 | 3809 | 3770 | 3694 | 4977 | 3836 | 3870 | 3889 |
| 4079 | HQ2579A | 3726 | 3593 | 3587 | 3593 | 3836 | 4982 | 3831 | 4015 |
| 4223 | HVO_1684 | 3759 | 3638 | 3802 | 3836 | 3870 | 3831 | 4973 | 4109 |
| 4232 | Hbo3152 | 3788 | 3732 | 3747 | 3654 | 3889 | 4015 | 4109 | 4944 |
676 symbols consensus ------------------------------MSDVTVTLPDGSELEVEAGATVEDVAYEIG #oth 13333223332222111111111111111112322.3....22.222411..1.1.21.. hla1470 MPLVRFRRGMSETDA:::::::::::::::QA::::V::::A::D:P:::::::::F::: VNG1835 MNVSERSSDI::::::::::::::::::::::S:::::::::T:::AS::::::::H::: rrnAC3462 MRIRTRRCQSNTSVARVSIHLSPAAVVSSD::T::::::::TP::::R:S:::::::::: Hmu2483 ::::::::::::::::::::::::::::::::T:::::::::P::L:V::::::A::::: NP2410A ::::::::::::::::::::::::::::::::EIV::::::::::M:S:S:::::::::: HQ2579A :::::::::::::::::::::::::::::::N:I::::::::::S:P:D::::::::::: HVO_1684 :::::::::::::::::::::::::::::::::IA:I::::T::S::E::::R:A:FA:: Hbo3152 ::::::::::::::::::::::::::::::::ELV:N:::::::S::E:::::::::::: consensus PGLGRDTVAGVVDGELVDKAAPLHDDAELEIVTDQSDEYLDVLRHSAAHVFAQALQRLHP #oth ....4..1..11.1...2142324312321...121...23....1....1...11.211 hla1470 ::::::::::KI:::::E:Y:TV::G:RI:::::::::::T::::::::::::::::::: VNG1835 ::::::::::KI:H:::A:EE:ISE:C:I::::::::::::::::T::::L:::IR:H:: rrnAC3462 ::::D::::::::::::::H:::TA:V::::::ES:::::::::::::::::::::::YS Hmu2483 ::::S::::::::::::::HT::P:::D::::::GA:::V::::::::::::::::::Y: NP2410A ::::D:::::::::::::::EQ:T::C::V::::::::::Q::::::::::::::::::: HQ2579A :::::::I::::::::::ATTSVYN::RVV:::E:::::QR::::::::::::::::EY: HVO_1684 ::::K::::::::::::::ET::::G:D:V:::::::::::::::::::::::::::::: Hbo3152 ::::E:::::::::::::::::V::G:QVV::::::::::R::::T::::::::::::Y: consensus EAKLTIGPPTDEGFYYDVTGVDLDEDDLEAIEAEMEEIIEEDLDIEREERDREEALERYE #oth 1.2.11..3.12.....113.11122..13.13.144..22.311113441.22.324.1 hla1470 ::T::::::::::::::::D::::::::D:::E::D:::AA:Y:::::V:S::::K:I:A VNG1835 D:::::::Y::::::::IAN:E::A:::DE:Q::AAS::DD:::V::V:Y::AD:R:H:A rrnAC3462 D:::::::W::N:::::I::::I:::::::::::A:::::::::::::LV::DD:F:::: Hmu2483 ::E::L::W::D:::::::::::::::::D::E:AH:::A:::::::VML:::A::D::: NP2410A ::::A:::::E:::::::::::::A:::::::::::T:::A:H::::A::S::::F:I:: HQ2579A D::::::::::D:::::IAS:::::N:::T::T:::A::DA:IP:TQQYQS::::FSK:: HVO_1684 ::::::::W::D:::::::S:::EQE::::::D::RD::::::::::VVV:::::::K:A Hbo3152 ::::A:::S::::::::::N::::A:::::::D::::::::::PV:::L:S::D:::L:: consensus DNPYKRDILETEAADDDEVSFYTQGDFEDLCQGPHVESTGEIGAFELLNISAAYWRGDED #oth 2.21.32..23.1.112111..4.1112...1....1...1..1331.131111...1.1 hla1470 ::E::LQ::DE:-:::E::T::V:D:WQ::::::::::::::::TT::EV:::::::::: VNG1835 ::EF::E::DA:::G:GP:::::::::::::K::::D::::::G::V:ET:::::::::E rrnAC3462 ::QF:Q::::::::::E::::::::E:::::::::::::::::G:A::E::::F:::E:E Hmu2483 ::E::QE::A::::GE:P::::E::E:Y:::::::::::::::G:A::EM::S::::E:: NP2410A :::::::::::::::E:P::::::D:WQ::::::::D:::::::V:::::A::::::::: HQ2579A N::::C:::::::::E:P::::I:D:::::::::::D:::::::IT:::::S:::::::: HVO_1684 ::::::::::E:::G:::L:::Q::E:::::K::::::::::::VK:::::::::::::: Hbo3152 E:::::::::N:::G:::L:::V::E:::::K::::::::K:::V::::::S:::::::E consensus NDTLTRVYGTAFESESDLEEFLERREEAKERDHRKIGQEMDLFSIPEVTGPGLPLYHPNG #oth 11.......1..21.32.322123.41.21.....1.1.11..1.122........2.2. hla1470 ::::::::::::A:::::K:H::L::::L:::::::::::N:::::T:::::::::::P: VNG1835 RE::::::::::PT::::Q:Y:A::::::::::::L:R::::::::D::::::::::::: rrnAC3462 :E::::::::::PT:DA:D::::Q:RK:E::::::::::::::::D:T::::::::E::: Hmu2483 ::::::::::::PT:EE:D:Y::::QK::::::::::::::::::D:T::::::::E::: NP2410A :E:::::::::::::::::G::Q::::::K:::::L:::L::::::D::::::::::::: HQ2579A :::::::::A::::::E::S:::::KK::::::::::::L::::::DI::::::::::D: HVO_1684 :::::::::::::::::::::::M:::::::::::L:::LN::A:D:T::::::::Q::: Hbo3152 :E:::::::::::::K::K:YM:L:A::E::::::::R:::::::::::::::::::::: consensus KTILRELSDFAAQLNRDAGYDEVETPHLFRTELWKKSGHYENYVDDMFLLDVNDEEYGLK #oth .31.3..231154..3131.12.....1.......1....1..1........1....... hla1470 ::V:::::N::NE:::EN::E::::::V:::::::::::::::K:::::::::::::::: VNG1835 ::V:::::EYVRG::SEM:::::::::::::::::Q::::D::::::::::::::::::: rrnAC3462 :K::N::::YV:G::::::::::::::V:::::::::::::::::::::::::::::::: Hmu2483 ::V:N:::EYV:D:::E::::::::::V::::::::::::D::::::::::::::::::: NP2410A :AV::::E::VD:::D:Q::EF:::::::::::::Q:::::::::::::::::::::::: HQ2579A :K::N:::S::RS::LE:::EP:::::::::::::Q::::::::::::::::S::::::: HVO_1684 :R::D::A:Y:K:::L:::::P:::::::::::::::::::::::::::::::::::::: Hbo3152 :R::S:::E::ES::L::D:EP::::::::::::::::::D::::::::::::::::::: consensus PMNCPGHATIFDQNSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFVRP #oth ...........2141.......2..1.1.................1.1.......1.222 hla1470 :::::::::::::Q::::::::Q::::N:::::::::::::::::::::::::::::::: VNG1835 :::::::::::NEG:::::::::::::::::::::::::::::::::A:::::::V:A:A rrnAC3462 :::::::::::E:::::::::::::::::::::::::::::::::T:A:::::::::::: Hmu2483 :::::::::::::K::::::::I::::::::::::::::::::::T:::::::::::::: NP2410A :::::::::::N:GN::::::::::A:N:::::::::::::::::::A::::::::::ER HQ2579A :::::::::::::H:::::::::::::::::::::::::::::::::::::::::::CQ: HVO_1684 :::::::::::::Q:::::::::::::::::::::::::::::::::::::::::::::: Hbo3152 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::C:: consensus DQIEQEVRSIMDIILEVLDTFDLDYEVALATRPEKSVGSDEIWEQAESQLRSVLESQGID #oth 11.13.1463226.43221.13.122.11....1..1.1.1...3113..13..143231 hla1470 :::R::IE:VIEM:F::VE:L:::V::::::::D::::G:::::S::E:::D::::G:YE VNG1835 ::::A:::RL::T:T:::::::::::::::::::::::::D::::S:R:::E::DQ::V: rrnAC3462 ::::E::LATV::::DT::::N:::T:QF:::::::::G:::::K:::::E::::E:D:: Hmu2483 ::::A::L:::::::DI::::S:::T:QF:::::::T:::::::K:::::EA:::QE::: NP2410A :A:::::NV:::Q:E:::::::::::::::::::::::::::::::QT::::::::S:M: HQ2579A E::::::THV::A:YS:::::G:EAH::::::::::::G:::::N::T:::::::::N:: HVO_1684 ::::D:INL:I:N::T:F:::G::A::::::::D:::::::::::::T:::A::DDS::: Hbo3152 E:::::I:QV:NS:Y::::::G:EAH:::::::::::::::::::S:::::::::N:N:: consensus YDVEPGDGAFYGPKIDFAFEDALGRHWDGPTVQLDFNMPDRFDLTYTGEDNEDHRPVMIH #oth .22.3............2.1.....5.......1.....1..1.2...1..22.1..... hla1470 :::::::::::::::::G:::::::V::::::::::::::::::::::::::::Q::::: VNG1835 :::::::::::::::::G:::::::S::::::::::::::::::E:::S::DA:Q::::: rrnAC3462 :V::E::::::::::::::::::::::::::::::::::E::::S:::::::E::::::: Hmu2483 :V::E::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP2410A ::I:S::::::::::::::::::::N:::::::::::::E::::::::::::E::::::: HQ2579A ::L::::::::::::::::::::::Q::::::::::::::::E::::::::T::Q::::: HVO_1684 :GI:A::::::::::::::K:::::K::::::::::::::::::::::::::::Q::::: Hbo3152 ::L::::::::::::::S:::::::K:::::::V:::::E::::::::::::E::::::: consensus RALYGSYERFFMVLIEHFNGKFPLWLAPEQVRILPVSDDNIGYAHRIKNE-LDD--FRVE #oth ..............1..11.3..3....1.1.1..11.1212.12322311.4.111..3 hla1470 ::::::::::::::::::D:D:::::::::::::::::ETL:::::V:::::E:AG:::: VNG1835 :::::::::::::::::Y::R::T::::::::::::T:::L:::::V:::::G:::Y::: rrnAC3462 ::::::::::::::T::Y:::::P::::::I:L::::::::T:CEE:QD::::::::::T Hmu2483 :::::::::::::::::Y:::::P:::::::::::::::::D:CEE:AA::::::::::: NP2410A ::::::::::::::::::D:N::T::::::::::::::::::::KQL::RY::::::::: HQ2579A ::::::::::::::::::::::::::::D::::::I:::QL:::::::::::S::::::S HVO_1684 :::::::::::::::::::::::F:::::::::::I:::Q::::KKLQY:::N::::::D Hbo3152 :::::::::::::::::::::::F:::::::::::I:::QL:::::V:::::G::::::S consensus IEDRSWTVGRKIRAAHDDRVPYMLIVGDDEEEAGTISVRDRKEREEKDVDLAAFRDHLES #oth 1...2..1.1..14112121...411.21.233211.....2.2142122233.34..53 hla1470 V:::D:::::::::G::::L:::V:::E::Q::::V:::::F:NQRG::::D::V:::VA VNG1835 V:::D::::K::QQ::::N:::::V::::::D:DAV:::::Q:::G:G::::E::A::D: rrnAC3462 :::::::::K::QQ:::::::::CVI::N:::::::::::::::::::I:I:E::::::T Hmu2483 :::::::::K::QV::::K::::MVI:::::A::::::::::::::::LE::D:EQ:::R NP2410A :::::::::K::QT::::::::::V:::N::::::V:::::F:D:R::::VET:::::A: HQ2579A ::::A::L:::::::QEE:::::I:I::::VSTE:::::::::::KQ::::ST:HS::K: HVO_1684 :::::::L:::::E:QT::::::V:::G::::D::::::::::::A:::SVE::::::R: Hbo3152 V::::::L:::::EGQE:N::::::::EN:::S::::::::Q::::Q::SID:::E:::A consensus EVDEKRTEPDFLDD-- #oth .2131.2112122531 hla1470 :R:::::::E:V:AE: VNG1835 :::G:::::::::-:: rrnAC3462 ::EQQ::AVT::AGR: Hmu2483 ::EQ:::AVTY:V-:: NP2410A ::E:::V::::V:E:: HQ2579A :YEN::L::::I:MN: HVO_1684 :Y::::::::::A:EE Hbo3152 :Y::::L:::::A:::